See 
<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/87/display/redirect?page=changes>

Changes:

[wcn] Update generated version of Fn API code.

[robertwb] [BEAM-3490] Make runtime type checking code runner agnostic.

[github] get the query from configuration not options

[dariusz.aniszewski] use build $WORKSPACE as pkb temp_dir and update pip and 
setuptools in

[kenn] google-java-format

[kenn] Fix Distinct null pointer error with speculative triggers

[robertwb] Direct runner fixes.

[lcwik] [BEAM-2926] Add support for side inputs to the runner harness.

[kenn] Sickbay flakey KinesisReaderTest

------------------------------------------
[...truncated 112.76 KB...]
    x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions 
-Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv 
-O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector 
--param=ssp-buffer-size=4 -Wformat -Werror=format-security 
build/temp.linux-x86_64-2.7/numpy/core/src/dummymodule.o 
-Lbuild/temp.linux-x86_64-2.7 -lm -o 
build/lib.linux-x86_64-2.7/numpy/core/_dummy.so
    building 'numpy.core.multiarray' extension
    compiling C sources
    C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g 
-fwrapv -O2 -Wall -Wstrict-prototypes -fPIC
    
    compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Inumpy/core/include 
-Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private 
-Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath 
-Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort 
-I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c'
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/compiled_base.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/sequence.c
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    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/getset.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/arrayobject.c
    x86_64-linux-gnu-gcc: numpy/core/src/private/ufunc_override.c
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    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/datetime_busdaycal.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/vdot.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/array_assign_array.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/buffer.c
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    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/convert.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/shape.c
    x86_64-linux-gnu-gcc: 
build/src.linux-x86_64-2.7/numpy/core/src/multiarray/lowlevel_strided_loops.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/multiarraymodule.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/item_selection.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/usertypes.c
    x86_64-linux-gnu-gcc: 
build/src.linux-x86_64-2.7/numpy/core/src/multiarray/arraytypes.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/calculation.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/hashdescr.c
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    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/dtype_transfer.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/mapping.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/flagsobject.c
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    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/common.c
    x86_64-linux-gnu-gcc: 
build/src.linux-x86_64-2.7/numpy/core/src/multiarray/nditer_templ.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/ucsnarrow.c
    x86_64-linux-gnu-gcc: 
build/src.linux-x86_64-2.7/numpy/core/src/multiarray/einsum.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/number.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/numpyos.c
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    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/ctors.c
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    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/nditer_api.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/iterators.c
    x86_64-linux-gnu-gcc: 
build/src.linux-x86_64-2.7/numpy/core/src/multiarray/scalartypes.c
    x86_64-linux-gnu-gcc: numpy/core/src/private/mem_overlap.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/array_assign.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/nditer_pywrap.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/datetime_busday.c
    x86_64-linux-gnu-gcc: numpy/core/src/multiarray/alloc.c
    x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions 
-Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv 
-O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector 
--param=ssp-buffer-size=4 -Wformat -Werror=format-security 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/alloc.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/arrayobject.o 
build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/multiarray/arraytypes.o
 build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/array_assign.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/array_assign_scalar.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/array_assign_array.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/buffer.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/calculation.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/compiled_base.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/common.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/convert.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/convert_datatype.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/conversion_utils.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/ctors.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/datetime.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/datetime_strings.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/datetime_busday.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/datetime_busdaycal.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/descriptor.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/dtype_transfer.o 
build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/multiarray/einsum.o
 build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/flagsobject.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/getset.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/hashdescr.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/item_selection.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/iterators.o 
build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/multiarray/lowlevel_strided_loops.o
 build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/mapping.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/methods.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/multiarraymodule.o 
build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/multiarray/nditer_templ.o
 build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/nditer_api.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/nditer_constr.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/nditer_pywrap.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/number.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/numpyos.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/refcount.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/sequence.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/shape.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/scalarapi.o 
build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/multiarray/scalartypes.o
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build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/usertypes.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/ucsnarrow.o 
build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/vdot.o 
build/temp.linux-x86_64-2.7/numpy/core/src/private/mem_overlap.o 
build/temp.linux-x86_64-2.7/numpy/core/src/private/ufunc_override.o 
-Lbuild/temp.linux-x86_64-2.7 -lnpymath -lnpysort -lm -o 
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    building 'numpy.core.umath' extension
    compiling C sources
    C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g 
-fwrapv -O2 -Wall -Wstrict-prototypes -fPIC
    
    compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/umath -Inumpy/core/include 
-Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private 
-Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath 
-Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort 
-I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c'
    x86_64-linux-gnu-gcc: numpy/core/src/umath/ufunc_type_resolution.c
    x86_64-linux-gnu-gcc: numpy/core/src/umath/ufunc_object.c
    numpy/core/src/umath/ufunc_object.c: In function ‘PyUFunc_GenericReduction’:
    numpy/core/src/umath/ufunc_object.c:3912:15: warning: unused variable 
‘out_obj’ [-Wunused-variable]
         PyObject *out_obj = NULL;
                   ^
    x86_64-linux-gnu-gcc: 
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    x86_64-linux-gnu-gcc: 
build/src.linux-x86_64-2.7/numpy/core/src/umath/loops.c
    x86_64-linux-gnu-gcc: numpy/core/src/umath/umathmodule.c
    x86_64-linux-gnu-gcc: numpy/core/src/umath/reduction.c
    x86_64-linux-gnu-gcc: numpy/core/src/private/mem_overlap.c
    x86_64-linux-gnu-gcc: numpy/core/src/private/ufunc_override.c
    x86_64-linux-gnu-gcc: numpy/core/src/umath/override.c
    x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions 
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build/temp.linux-x86_64-2.7/numpy/core/src/private/mem_overlap.o 
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-Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy 
-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath 
-Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort 
-I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
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    x86_64-linux-gnu-gcc: 
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    x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions 
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-O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector 
--param=ssp-buffer-size=4 -Wformat -Werror=format-security 
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    C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g 
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    compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 
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-Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy 
-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath 
-Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort 
-I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
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-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
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    x86_64-linux-gnu-gcc: 
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    x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions 
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-O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector 
--param=ssp-buffer-size=4 -Wformat -Werror=format-security 
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    C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g 
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-Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy 
-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath 
-Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort 
-I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
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    x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions 
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-Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy 
-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath 
-Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort 
-I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
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    x86_64-linux-gnu-gcc: numpy/core/src/private/mem_overlap.c
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    x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions 
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build/lib.linux-x86_64-2.7/numpy/core/multiarray_tests.so
    building 'numpy.core.operand_flag_tests' extension
    compiling C sources
    C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g 
-fwrapv -O2 -Wall -Wstrict-prototypes -fPIC
    
    compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 
-Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy 
-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath 
-Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort 
-I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c'
    x86_64-linux-gnu-gcc: 
build/src.linux-x86_64-2.7/numpy/core/src/umath/operand_flag_tests.c
    x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions 
-Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv 
-O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector 
--param=ssp-buffer-size=4 -Wformat -Werror=format-security 
build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/umath/operand_flag_tests.o
 -Lbuild/temp.linux-x86_64-2.7 -o 
build/lib.linux-x86_64-2.7/numpy/core/operand_flag_tests.so
    building 'numpy.fft.fftpack_lite' extension
    compiling C sources
    C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g 
-fwrapv -O2 -Wall -Wstrict-prototypes -fPIC
    
    compile options: '-Inumpy/core/include 
-Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private 
-Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath 
-Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort 
-I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c'
    x86_64-linux-gnu-gcc: numpy/fft/fftpack.c
    x86_64-linux-gnu-gcc: numpy/fft/fftpack_litemodule.c
    x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions 
-Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv 
-O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector 
--param=ssp-buffer-size=4 -Wformat -Werror=format-security 
build/temp.linux-x86_64-2.7/numpy/fft/fftpack_litemodule.o 
build/temp.linux-x86_64-2.7/numpy/fft/fftpack.o -Lbuild/temp.linux-x86_64-2.7 
-o build/lib.linux-x86_64-2.7/numpy/fft/fftpack_lite.so
    building 'numpy.linalg.lapack_lite' extension
    compiling C sources
    C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g 
-fwrapv -O2 -Wall -Wstrict-prototypes -fPIC
    
    compile options: '-Inumpy/core/include 
-Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private 
-Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath 
-Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort 
-I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c'
    x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/python_xerbla.c
    x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c_blas.c
    numpy/linalg/lapack_lite/f2c_blas.c: In function ‘cgemm_’:
    numpy/linalg/lapack_lite/f2c_blas.c:389:20: warning: variable ‘ncola’ set 
but not used [-Wunused-but-set-variable]
         static integer ncola;
                        ^
    numpy/linalg/lapack_lite/f2c_blas.c: In function ‘dgemm_’:
    numpy/linalg/lapack_lite/f2c_blas.c:6895:20: warning: variable ‘ncola’ set 
but not used [-Wunused-but-set-variable]
         static integer ncola;
                        ^
    numpy/linalg/lapack_lite/f2c_blas.c: In function ‘sgemm_’:
    numpy/linalg/lapack_lite/f2c_blas.c:11514:20: warning: variable ‘ncola’ set 
but not used [-Wunused-but-set-variable]
         static integer ncola;
                        ^
    numpy/linalg/lapack_lite/f2c_blas.c: In function ‘zgemm_’:
    numpy/linalg/lapack_lite/f2c_blas.c:15736:20: warning: variable ‘ncola’ set 
but not used [-Wunused-but-set-variable]
         static integer ncola;
                        ^
    x86_64-linux-gnu-gcc: numpy/linalg/lapack_litemodule.c
    x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c_z_lapack.c
    x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c_config.c
    x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c_d_lapack.c
    x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c_s_lapack.c
    x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c_lapack.c
    x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c_c_lapack.c
    x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c.c
    x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions 
-Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv 
-O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector 
--param=ssp-buffer-size=4 -Wformat -Werror=format-security 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/python_xerbla.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_z_lapack.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_c_lapack.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_d_lapack.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_s_lapack.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_lapack.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_blas.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_config.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c.o 
-Lbuild/temp.linux-x86_64-2.7 -o 
build/lib.linux-x86_64-2.7/numpy/linalg/lapack_lite.so
    building 'numpy.linalg._umath_linalg' extension
    compiling C sources
    C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g 
-fwrapv -O2 -Wall -Wstrict-prototypes -fPIC
    
    compile options: '-Inumpy/core/include 
-Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private 
-Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath 
-Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort 
-I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c'
    x86_64-linux-gnu-gcc: build/src.linux-x86_64-2.7/numpy/linalg/umath_linalg.c
    x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions 
-Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv 
-O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector 
--param=ssp-buffer-size=4 -Wformat -Werror=format-security 
build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/linalg/umath_linalg.o
 build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/python_xerbla.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_z_lapack.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_c_lapack.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_d_lapack.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_s_lapack.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_lapack.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_blas.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_config.o 
build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c.o 
-Lbuild/temp.linux-x86_64-2.7 -lnpymath -o 
build/lib.linux-x86_64-2.7/numpy/linalg/_umath_linalg.so
    building 'numpy.random.mtrand' extension
    compiling C sources
    C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g 
-fwrapv -O2 -Wall -Wstrict-prototypes -fPIC
    
    compile options: '-D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 
-D_LARGEFILE64_SOURCE=1 -Inumpy/core/include 
-Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private 
-Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath 
-Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort 
-I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/private 
-Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c'
    x86_64-linux-gnu-gcc: numpy/random/mtrand/distributions.c
    x86_64-linux-gnu-gcc: numpy/random/mtrand/mtrand.c
    x86_64-linux-gnu-gcc: numpy/random/mtrand/initarray.c
    x86_64-linux-gnu-gcc: numpy/random/mtrand/randomkit.c
    x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions 
-Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv 
-O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector 
--param=ssp-buffer-size=4 -Wformat -Werror=format-security 
build/temp.linux-x86_64-2.7/numpy/random/mtrand/mtrand.o 
build/temp.linux-x86_64-2.7/numpy/random/mtrand/randomkit.o 
build/temp.linux-x86_64-2.7/numpy/random/mtrand/initarray.o 
build/temp.linux-x86_64-2.7/numpy/random/mtrand/distributions.o 
-Lbuild/temp.linux-x86_64-2.7 -o 
build/lib.linux-x86_64-2.7/numpy/random/mtrand.so
    Creating build/scripts.linux-x86_64-2.7/f2py
      adding 'build/scripts.linux-x86_64-2.7/f2py' to scripts
    changing mode of build/scripts.linux-x86_64-2.7/f2py from 644 to 755
    
    warning: no previously-included files matching '*.pyo' found anywhere in 
distribution
    warning: no previously-included files matching '*.pyd' found anywhere in 
distribution
    changing mode of 
<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/.env/bin/f2py>
 to 755
Successfully installed numpy
Cleaning up...
[beam_PerformanceTests_Compressed_TextIOIT] $ /bin/bash -xe 
/tmp/jenkins4422819881351835652.sh
+ .env/bin/pip install -e 'src/sdks/python/[gcp,test]'
Obtaining 
file://<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/src/sdks/python>
  Running setup.py 
(path:<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/src/sdks/python/setup.py)>
 egg_info for package from 
file://<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/src/sdks/python>
    
<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/src/sdks/python/setup.py>:66:
 UserWarning: You are using version 1.5.4 of pip. However, version 7.0.0 is 
recommended.
      _PIP_VERSION, REQUIRED_PIP_VERSION
    no previously-included directories found matching 'doc/.build'
    
    Installed 
<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/src/sdks/python/nose-1.3.7-py2.7.egg>
    /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution 
option: 'python_requires'
      warnings.warn(msg)
    
    warning: no files found matching 'README.md'
    warning: no files found matching 'NOTICE'
    warning: no files found matching 'LICENSE'
  Installing extra requirements: 'gcp,test'
Requirement already satisfied (use --upgrade to upgrade): avro>=1.8.1,<2.0.0 in 
/home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): crcmod>=1.7,<2.0 in 
/usr/lib/python2.7/dist-packages (from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): dill==0.2.6 in 
/home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): grpcio>=1.0,<2 in 
/home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): httplib2>=0.8,<0.10 
in /home/jenkins/.local/lib/python2.7/site-packages (from 
apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): mock>=1.0.1,<3.0.0 in 
/home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): 
oauth2client>=2.0.1,<5 in /home/jenkins/.local/lib/python2.7/site-packages 
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): 
protobuf>=3.5.0.post1,<4 in /home/jenkins/.local/lib/python2.7/site-packages 
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): pyyaml>=3.12,<4.0.0 
in /home/jenkins/.local/lib/python2.7/site-packages (from 
apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): pyvcf>=0.6.8,<0.7.0 
in /home/jenkins/.local/lib/python2.7/site-packages (from 
apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): six>=1.9,<1.12 in 
/home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): typing>=3.6.0,<3.7.0 
in /home/jenkins/.local/lib/python2.7/site-packages (from 
apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): futures>=3.1.1,<4.0.0 
in /home/jenkins/.local/lib/python2.7/site-packages (from 
apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): hdfs3>=0.3.0,<0.4.0 
in /home/jenkins/.local/lib/python2.7/site-packages (from 
apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): pyhamcrest>=1.9,<2.0 
in /home/jenkins/.local/lib/python2.7/site-packages (from 
apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): 
google-apitools>=0.5.18,<=0.5.20 in 
/home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): 
proto-google-cloud-datastore-v1>=0.90.0,<=0.90.4 in 
/home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): 
googledatastore==7.0.1 in /home/jenkins/.local/lib/python2.7/site-packages 
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): 
google-cloud-pubsub==0.26.0 in /home/jenkins/.local/lib/python2.7/site-packages 
(from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): 
google-cloud-bigquery==0.25.0 in 
/home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): enum34>=1.0.4 in 
/home/jenkins/.local/lib/python2.7/site-packages (from 
grpcio>=1.0,<2->apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): pyasn1>=0.1.7 in 
/home/jenkins/.local/lib/python2.7/site-packages (from 
oauth2client>=2.0.1,<5->apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): pyasn1-modules>=0.0.5 
in /home/jenkins/.local/lib/python2.7/site-packages (from 
oauth2client>=2.0.1,<5->apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): rsa>=3.1.4 in 
/home/jenkins/.local/lib/python2.7/site-packages (from 
oauth2client>=2.0.1,<5->apache-beam==2.4.0.dev)
Requirement already satisfied (use --upgrade to upgrade): 
googleapis-common-protos>=1.5.2,<2.0dev in 
/home/jenkins/.local/lib/python2.7/site-packages (from 
proto-google-cloud-datastore-v1>=0.90.0,<=0.90.4->apache-beam==2.4.0.dev)
Installing collected packages: apache-beam
  Running setup.py develop for apache-beam
    
<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/src/sdks/python/setup.py>:66:
 UserWarning: You are using version 1.5.4 of pip. However, version 7.0.0 is 
recommended.
      _PIP_VERSION, REQUIRED_PIP_VERSION
    /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution 
option: 'python_requires'
      warnings.warn(msg)
    
    warning: no files found matching 'README.md'
    warning: no files found matching 'NOTICE'
    warning: no files found matching 'LICENSE'
    Creating 
<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/.env/lib/python2.7/site-packages/apache-beam.egg-link>
 (link to .)
    Adding apache-beam 2.4.0.dev to easy-install.pth file
    
    Installed 
<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/src/sdks/python>
Successfully installed apache-beam
Cleaning up...
[beam_PerformanceTests_Compressed_TextIOIT] $ /bin/bash -xe 
/tmp/jenkins452099973575670171.sh
+ .env/bin/python PerfKitBenchmarker/pkb.py --project=apache-beam-testing 
--dpb_log_level=INFO --maven_binary=/home/jenkins/tools/maven/latest/bin/mvn 
--bigquery_table=beam_performance.compressed_textioit_pkb_results 
--official=true --benchmarks=beam_integration_benchmark --beam_it_timeout=1200 
--beam_it_profile=io-it --beam_prebuilt=true --beam_sdk=java 
--beam_it_module=sdks/java/io/file-based-io-tests 
--beam_it_class=org.apache.beam.sdk.io.text.TextIOIT 
'--beam_it_options=[--project=apache-beam-testing,--tempRoot=gs://temp-storage-for-perf-tests,--numberOfRecords=1000000,--filenamePrefix=gs://temp-storage-for-perf-tests/beam_PerformanceTests_Compressed_TextIOIT/87/,--compressionType=GZIP]'
 '--beam_extra_mvn_properties=[filesystem=gcs]'
Traceback (most recent call last):
  File "PerfKitBenchmarker/pkb.py", line 21, in <module>
    sys.exit(Main())
  File 
"<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py";,>
 line 869, in Main
    SetUpPKB()
  File 
"<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py";,>
 line 740, in SetUpPKB
    vm_util.GenTempDir()
  File 
"<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/PerfKitBenchmarker/perfkitbenchmarker/vm_util.py";,>
 line 121, in GenTempDir
    temp_dir.CreateTemporaryDirectories()
  File 
"<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/PerfKitBenchmarker/perfkitbenchmarker/temp_dir.py";,>
 line 62, in CreateTemporaryDirectories
    os.makedirs(path)
  File 
"<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/.env/lib/python2.7/os.py";,>
 line 157, in makedirs
    mkdir(name, mode)
OSError: [Errno 13] Permission denied: '/tmp/perfkitbenchmarker/runs/fccd8076'
Build step 'Execute shell' marked build as failure

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