See <https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/87/display/redirect?page=changes>
Changes: [wcn] Update generated version of Fn API code. [robertwb] [BEAM-3490] Make runtime type checking code runner agnostic. [github] get the query from configuration not options [dariusz.aniszewski] use build $WORKSPACE as pkb temp_dir and update pip and setuptools in [kenn] google-java-format [kenn] Fix Distinct null pointer error with speculative triggers [robertwb] Direct runner fixes. [lcwik] [BEAM-2926] Add support for side inputs to the runner harness. [kenn] Sickbay flakey KinesisReaderTest ------------------------------------------ [...truncated 112.76 KB...] x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/numpy/core/src/dummymodule.o -Lbuild/temp.linux-x86_64-2.7 -lm -o build/lib.linux-x86_64-2.7/numpy/core/_dummy.so building 'numpy.core.multiarray' extension compiling C sources C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c' x86_64-linux-gnu-gcc: numpy/core/src/multiarray/compiled_base.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/sequence.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/descriptor.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/getset.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/arrayobject.c x86_64-linux-gnu-gcc: numpy/core/src/private/ufunc_override.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/methods.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/datetime_busdaycal.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/vdot.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/array_assign_array.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/buffer.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/refcount.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/convert.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/shape.c x86_64-linux-gnu-gcc: build/src.linux-x86_64-2.7/numpy/core/src/multiarray/lowlevel_strided_loops.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/multiarraymodule.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/item_selection.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/usertypes.c x86_64-linux-gnu-gcc: build/src.linux-x86_64-2.7/numpy/core/src/multiarray/arraytypes.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/calculation.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/hashdescr.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/scalarapi.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/dtype_transfer.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/mapping.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/flagsobject.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/nditer_constr.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/convert_datatype.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/array_assign_scalar.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/conversion_utils.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/common.c x86_64-linux-gnu-gcc: build/src.linux-x86_64-2.7/numpy/core/src/multiarray/nditer_templ.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/ucsnarrow.c x86_64-linux-gnu-gcc: build/src.linux-x86_64-2.7/numpy/core/src/multiarray/einsum.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/number.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/numpyos.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/datetime.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/datetime_strings.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/ctors.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/temp_elide.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/nditer_api.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/iterators.c x86_64-linux-gnu-gcc: build/src.linux-x86_64-2.7/numpy/core/src/multiarray/scalartypes.c x86_64-linux-gnu-gcc: numpy/core/src/private/mem_overlap.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/array_assign.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/nditer_pywrap.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/datetime_busday.c x86_64-linux-gnu-gcc: numpy/core/src/multiarray/alloc.c x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/alloc.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/arrayobject.o build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/multiarray/arraytypes.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/array_assign.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/array_assign_scalar.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/array_assign_array.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/buffer.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/calculation.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/compiled_base.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/common.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/convert.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/convert_datatype.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/conversion_utils.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/ctors.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/datetime.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/datetime_strings.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/datetime_busday.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/datetime_busdaycal.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/descriptor.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/dtype_transfer.o build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/multiarray/einsum.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/flagsobject.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/getset.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/hashdescr.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/item_selection.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/iterators.o build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/multiarray/lowlevel_strided_loops.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/mapping.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/methods.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/multiarraymodule.o build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/multiarray/nditer_templ.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/nditer_api.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/nditer_constr.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/nditer_pywrap.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/number.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/numpyos.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/refcount.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/sequence.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/shape.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/scalarapi.o build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/multiarray/scalartypes.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/temp_elide.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/usertypes.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/ucsnarrow.o build/temp.linux-x86_64-2.7/numpy/core/src/multiarray/vdot.o build/temp.linux-x86_64-2.7/numpy/core/src/private/mem_overlap.o build/temp.linux-x86_64-2.7/numpy/core/src/private/ufunc_override.o -Lbuild/temp.linux-x86_64-2.7 -lnpymath -lnpysort -lm -o build/lib.linux-x86_64-2.7/numpy/core/multiarray.so building 'numpy.core.umath' extension compiling C sources C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/umath -Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c' x86_64-linux-gnu-gcc: numpy/core/src/umath/ufunc_type_resolution.c x86_64-linux-gnu-gcc: numpy/core/src/umath/ufunc_object.c numpy/core/src/umath/ufunc_object.c: In function ‘PyUFunc_GenericReduction’: numpy/core/src/umath/ufunc_object.c:3912:15: warning: unused variable ‘out_obj’ [-Wunused-variable] PyObject *out_obj = NULL; ^ x86_64-linux-gnu-gcc: build/src.linux-x86_64-2.7/numpy/core/src/umath/scalarmath.c x86_64-linux-gnu-gcc: build/src.linux-x86_64-2.7/numpy/core/src/umath/loops.c x86_64-linux-gnu-gcc: numpy/core/src/umath/umathmodule.c x86_64-linux-gnu-gcc: numpy/core/src/umath/reduction.c x86_64-linux-gnu-gcc: numpy/core/src/private/mem_overlap.c x86_64-linux-gnu-gcc: numpy/core/src/private/ufunc_override.c x86_64-linux-gnu-gcc: numpy/core/src/umath/override.c x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/numpy/core/src/umath/umathmodule.o build/temp.linux-x86_64-2.7/numpy/core/src/umath/reduction.o build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/umath/loops.o build/temp.linux-x86_64-2.7/numpy/core/src/umath/ufunc_object.o build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/umath/scalarmath.o build/temp.linux-x86_64-2.7/numpy/core/src/umath/ufunc_type_resolution.o build/temp.linux-x86_64-2.7/numpy/core/src/umath/override.o build/temp.linux-x86_64-2.7/numpy/core/src/private/mem_overlap.o build/temp.linux-x86_64-2.7/numpy/core/src/private/ufunc_override.o -Lbuild/temp.linux-x86_64-2.7 -lnpymath -lm -o build/lib.linux-x86_64-2.7/numpy/core/umath.so building 'numpy.core.umath_tests' extension compiling C sources C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c' x86_64-linux-gnu-gcc: build/src.linux-x86_64-2.7/numpy/core/src/umath/umath_tests.c x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/umath/umath_tests.o -Lbuild/temp.linux-x86_64-2.7 -o build/lib.linux-x86_64-2.7/numpy/core/umath_tests.so building 'numpy.core.test_rational' extension compiling C sources C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c' x86_64-linux-gnu-gcc: build/src.linux-x86_64-2.7/numpy/core/src/umath/test_rational.c x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/umath/test_rational.o -Lbuild/temp.linux-x86_64-2.7 -o build/lib.linux-x86_64-2.7/numpy/core/test_rational.so building 'numpy.core.struct_ufunc_test' extension compiling C sources C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c' x86_64-linux-gnu-gcc: build/src.linux-x86_64-2.7/numpy/core/src/umath/struct_ufunc_test.c x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/umath/struct_ufunc_test.o -Lbuild/temp.linux-x86_64-2.7 -o build/lib.linux-x86_64-2.7/numpy/core/struct_ufunc_test.so building 'numpy.core.multiarray_tests' extension compiling C sources C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c' x86_64-linux-gnu-gcc: numpy/core/src/private/mem_overlap.c x86_64-linux-gnu-gcc: build/src.linux-x86_64-2.7/numpy/core/src/multiarray/multiarray_tests.c x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/multiarray/multiarray_tests.o build/temp.linux-x86_64-2.7/numpy/core/src/private/mem_overlap.o -Lbuild/temp.linux-x86_64-2.7 -o build/lib.linux-x86_64-2.7/numpy/core/multiarray_tests.so building 'numpy.core.operand_flag_tests' extension compiling C sources C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c' x86_64-linux-gnu-gcc: build/src.linux-x86_64-2.7/numpy/core/src/umath/operand_flag_tests.c x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/core/src/umath/operand_flag_tests.o -Lbuild/temp.linux-x86_64-2.7 -o build/lib.linux-x86_64-2.7/numpy/core/operand_flag_tests.so building 'numpy.fft.fftpack_lite' extension compiling C sources C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC compile options: '-Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c' x86_64-linux-gnu-gcc: numpy/fft/fftpack.c x86_64-linux-gnu-gcc: numpy/fft/fftpack_litemodule.c x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/numpy/fft/fftpack_litemodule.o build/temp.linux-x86_64-2.7/numpy/fft/fftpack.o -Lbuild/temp.linux-x86_64-2.7 -o build/lib.linux-x86_64-2.7/numpy/fft/fftpack_lite.so building 'numpy.linalg.lapack_lite' extension compiling C sources C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC compile options: '-Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c' x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/python_xerbla.c x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c_blas.c numpy/linalg/lapack_lite/f2c_blas.c: In function ‘cgemm_’: numpy/linalg/lapack_lite/f2c_blas.c:389:20: warning: variable ‘ncola’ set but not used [-Wunused-but-set-variable] static integer ncola; ^ numpy/linalg/lapack_lite/f2c_blas.c: In function ‘dgemm_’: numpy/linalg/lapack_lite/f2c_blas.c:6895:20: warning: variable ‘ncola’ set but not used [-Wunused-but-set-variable] static integer ncola; ^ numpy/linalg/lapack_lite/f2c_blas.c: In function ‘sgemm_’: numpy/linalg/lapack_lite/f2c_blas.c:11514:20: warning: variable ‘ncola’ set but not used [-Wunused-but-set-variable] static integer ncola; ^ numpy/linalg/lapack_lite/f2c_blas.c: In function ‘zgemm_’: numpy/linalg/lapack_lite/f2c_blas.c:15736:20: warning: variable ‘ncola’ set but not used [-Wunused-but-set-variable] static integer ncola; ^ x86_64-linux-gnu-gcc: numpy/linalg/lapack_litemodule.c x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c_z_lapack.c x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c_config.c x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c_d_lapack.c x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c_s_lapack.c x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c_lapack.c x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c_c_lapack.c x86_64-linux-gnu-gcc: numpy/linalg/lapack_lite/f2c.c x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/numpy/linalg/lapack_litemodule.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/python_xerbla.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_z_lapack.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_c_lapack.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_d_lapack.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_s_lapack.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_lapack.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_blas.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_config.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c.o -Lbuild/temp.linux-x86_64-2.7 -o build/lib.linux-x86_64-2.7/numpy/linalg/lapack_lite.so building 'numpy.linalg._umath_linalg' extension compiling C sources C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC compile options: '-Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c' x86_64-linux-gnu-gcc: build/src.linux-x86_64-2.7/numpy/linalg/umath_linalg.c x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/numpy/linalg/umath_linalg.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/python_xerbla.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_z_lapack.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_c_lapack.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_d_lapack.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_s_lapack.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_lapack.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_blas.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c_config.o build/temp.linux-x86_64-2.7/numpy/linalg/lapack_lite/f2c.o -Lbuild/temp.linux-x86_64-2.7 -lnpymath -o build/lib.linux-x86_64-2.7/numpy/linalg/_umath_linalg.so building 'numpy.random.mtrand' extension compiling C sources C compiler: x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC compile options: '-D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -Inumpy/core/include -Ibuild/src.linux-x86_64-2.7/numpy/core/include/numpy -Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -I/usr/include/python2.7 -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -Ibuild/src.linux-x86_64-2.7/numpy/core/src/private -Ibuild/src.linux-x86_64-2.7/numpy/core/src/npymath -c' x86_64-linux-gnu-gcc: numpy/random/mtrand/distributions.c x86_64-linux-gnu-gcc: numpy/random/mtrand/mtrand.c x86_64-linux-gnu-gcc: numpy/random/mtrand/initarray.c x86_64-linux-gnu-gcc: numpy/random/mtrand/randomkit.c x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/numpy/random/mtrand/mtrand.o build/temp.linux-x86_64-2.7/numpy/random/mtrand/randomkit.o build/temp.linux-x86_64-2.7/numpy/random/mtrand/initarray.o build/temp.linux-x86_64-2.7/numpy/random/mtrand/distributions.o -Lbuild/temp.linux-x86_64-2.7 -o build/lib.linux-x86_64-2.7/numpy/random/mtrand.so Creating build/scripts.linux-x86_64-2.7/f2py adding 'build/scripts.linux-x86_64-2.7/f2py' to scripts changing mode of build/scripts.linux-x86_64-2.7/f2py from 644 to 755 warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution changing mode of <https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/.env/bin/f2py> to 755 Successfully installed numpy Cleaning up... [beam_PerformanceTests_Compressed_TextIOIT] $ /bin/bash -xe /tmp/jenkins4422819881351835652.sh + .env/bin/pip install -e 'src/sdks/python/[gcp,test]' Obtaining file://<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/src/sdks/python> Running setup.py (path:<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/src/sdks/python/setup.py)> egg_info for package from file://<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/src/sdks/python> <https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/src/sdks/python/setup.py>:66: UserWarning: You are using version 1.5.4 of pip. However, version 7.0.0 is recommended. _PIP_VERSION, REQUIRED_PIP_VERSION no previously-included directories found matching 'doc/.build' Installed <https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/src/sdks/python/nose-1.3.7-py2.7.egg> /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'python_requires' warnings.warn(msg) warning: no files found matching 'README.md' warning: no files found matching 'NOTICE' warning: no files found matching 'LICENSE' Installing extra requirements: 'gcp,test' Requirement already satisfied (use --upgrade to upgrade): avro>=1.8.1,<2.0.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): crcmod>=1.7,<2.0 in /usr/lib/python2.7/dist-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): dill==0.2.6 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): grpcio>=1.0,<2 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): httplib2>=0.8,<0.10 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): mock>=1.0.1,<3.0.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): oauth2client>=2.0.1,<5 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): protobuf>=3.5.0.post1,<4 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): pyyaml>=3.12,<4.0.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): pyvcf>=0.6.8,<0.7.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): six>=1.9,<1.12 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): typing>=3.6.0,<3.7.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): futures>=3.1.1,<4.0.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): hdfs3>=0.3.0,<0.4.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): pyhamcrest>=1.9,<2.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): google-apitools>=0.5.18,<=0.5.20 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): proto-google-cloud-datastore-v1>=0.90.0,<=0.90.4 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): googledatastore==7.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): google-cloud-pubsub==0.26.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): google-cloud-bigquery==0.25.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): enum34>=1.0.4 in /home/jenkins/.local/lib/python2.7/site-packages (from grpcio>=1.0,<2->apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): pyasn1>=0.1.7 in /home/jenkins/.local/lib/python2.7/site-packages (from oauth2client>=2.0.1,<5->apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): pyasn1-modules>=0.0.5 in /home/jenkins/.local/lib/python2.7/site-packages (from oauth2client>=2.0.1,<5->apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): rsa>=3.1.4 in /home/jenkins/.local/lib/python2.7/site-packages (from oauth2client>=2.0.1,<5->apache-beam==2.4.0.dev) Requirement already satisfied (use --upgrade to upgrade): googleapis-common-protos>=1.5.2,<2.0dev in /home/jenkins/.local/lib/python2.7/site-packages (from proto-google-cloud-datastore-v1>=0.90.0,<=0.90.4->apache-beam==2.4.0.dev) Installing collected packages: apache-beam Running setup.py develop for apache-beam <https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/src/sdks/python/setup.py>:66: UserWarning: You are using version 1.5.4 of pip. However, version 7.0.0 is recommended. _PIP_VERSION, REQUIRED_PIP_VERSION /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'python_requires' warnings.warn(msg) warning: no files found matching 'README.md' warning: no files found matching 'NOTICE' warning: no files found matching 'LICENSE' Creating <https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/.env/lib/python2.7/site-packages/apache-beam.egg-link> (link to .) Adding apache-beam 2.4.0.dev to easy-install.pth file Installed <https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/src/sdks/python> Successfully installed apache-beam Cleaning up... [beam_PerformanceTests_Compressed_TextIOIT] $ /bin/bash -xe /tmp/jenkins452099973575670171.sh + .env/bin/python PerfKitBenchmarker/pkb.py --project=apache-beam-testing --dpb_log_level=INFO --maven_binary=/home/jenkins/tools/maven/latest/bin/mvn --bigquery_table=beam_performance.compressed_textioit_pkb_results --official=true --benchmarks=beam_integration_benchmark --beam_it_timeout=1200 --beam_it_profile=io-it --beam_prebuilt=true --beam_sdk=java --beam_it_module=sdks/java/io/file-based-io-tests --beam_it_class=org.apache.beam.sdk.io.text.TextIOIT '--beam_it_options=[--project=apache-beam-testing,--tempRoot=gs://temp-storage-for-perf-tests,--numberOfRecords=1000000,--filenamePrefix=gs://temp-storage-for-perf-tests/beam_PerformanceTests_Compressed_TextIOIT/87/,--compressionType=GZIP]' '--beam_extra_mvn_properties=[filesystem=gcs]' Traceback (most recent call last): File "PerfKitBenchmarker/pkb.py", line 21, in <module> sys.exit(Main()) File "<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py",> line 869, in Main SetUpPKB() File "<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py",> line 740, in SetUpPKB vm_util.GenTempDir() File "<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/PerfKitBenchmarker/perfkitbenchmarker/vm_util.py",> line 121, in GenTempDir temp_dir.CreateTemporaryDirectories() File "<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/PerfKitBenchmarker/perfkitbenchmarker/temp_dir.py",> line 62, in CreateTemporaryDirectories os.makedirs(path) File "<https://builds.apache.org/job/beam_PerformanceTests_Compressed_TextIOIT/ws/.env/lib/python2.7/os.py",> line 157, in makedirs mkdir(name, mode) OSError: [Errno 13] Permission denied: '/tmp/perfkitbenchmarker/runs/fccd8076' Build step 'Execute shell' marked build as failure