[COOT] Open windows with startup script

2009-02-26 Thread Meindert Lamers
Dear all, I was wondering if there is a way to open the following windows using a startup script. -Cell & symmetry -Stereo/mono -Refine regularize control -Bond parameters. I can get windows to open for Model/Fit/Refine, Display Manager, & "Go to atom" using: (post-model-fit-refine-dialog) (post-

Re: [COOT] how to optimise the geometry in the coot

2009-02-26 Thread Paul Emsley
Jhon Thomas wrote: Hello paul I am completley naive with coot.I am using the coot present with the ccp4-6.0.2, which is an older version of coot. I am facing very difficulty in optimising the geometry of the model in coot.I follow the tutorial for optimisation of the geometry. i go like this.

Re: [COOT] python or scheme

2009-02-26 Thread Ethan A Merritt
On Thursday 26 February 2009, William G. Scott wrote: > > As far as learning scheme, > > My $0.02: > > From a purely practical standpoint, if, like me, you have limited > time, energy and mental capacity, python would probably yield a better > investment payback. I hope you will pardon my

[COOT] how to optimise the geometry in the coot

2009-02-26 Thread Jhon Thomas
Hello paul I am completley naive with coot.I am using the coot present with the ccp4-6.0.2, which is an older version of coot. I am facing very difficulty in optimising the geometry of the model in coot.I follow the tutorial for optimisation of the geometry. i go like this. 1) a) real space refin

Re: [COOT] python or scheme

2009-02-26 Thread William G. Scott
As far as learning scheme, My $0.02: From a purely practical standpoint, if, like me, you have limited time, energy and mental capacity, python would probably yield a better investment payback. There are numerous extensions available that make parsing things like pdb files very simple, t

Re: [COOT] python or scheme

2009-02-26 Thread Pete Meyer
> I am new to coot, but I have already discovered how powerful extensions and > key bindings can be. My question is quite simple: if I want to generate my > own extension or keybinding, which scripting language is better suited? I am > not very familiar with either but willing to experiment. I'd u

Re: [COOT] python or scheme?

2009-02-26 Thread Kevin Cowtan
Some of these things are not difficult, they just need a little time and the ideas. I wonder if we need a 'Coot Janitors' project, modelled on the Linux 'kernel janitors', which helps people get involved in doing some of the easier jobs that needs to be done. If we were to start writing 'how