[COOT] imodel vs delete-residue-with-altconf

2011-12-09 Thread Judit Debreczeni
I used to use delete-residue-with-altconf in an extension, looping over a subset of residues returned by residues-with-alt-confs. As delete-residue-with-altconf no longer exists, I use delete-residue-with-full-spec instead, which requires an imodel. Unfortunately, residues-with-alt-confs does not

[COOT] Coot 0.6.2 and X11

2011-12-09 Thread Matthew J. Whitley
Hello all, Today I upgraded Coot from version 0.6.1 to 0.6.2 on my Mac (OS X 10.6.8). The installation was successful, but now Coot won't run anymore. When I start the program, I get the following error: dyld: Library not loaded: /usr/X11/lib/libX11.6.dylib Referenced from:

Re: [COOT] Coot 0.6.2 and X11

2011-12-09 Thread Prof. William G. Scott
Well, I just build a version for 10.6, and haven't had a chance to point anyone to its web location, so I am guessing you installed the one I compiled for 10.7…. So please try this one and lemme know if it works please. Bill http://sage.ucsc.edu/~wgscott/coot/ William G. Scott Professor

[COOT] help me to install coot on ubuntu11.10!

2011-12-09 Thread 王瑞
I have updated ubuntu11.04 to 11.10, ccp4-6.2.0 works well, but coot can't work any more, the following is its tips: COOT_PREFIX is /home/dell/Documents/ccp4-packages/Coot-0.6.2 /home/dell/Documents/ccp4-packages/Coot-0.6.2/bin/coot-real

Re: [COOT] help me to install coot on ubuntu11.10!

2011-12-09 Thread Miguel Ortiz Lombardia
El 10/12/11 02:00, 王瑞 escribió: I have updated ubuntu11.04 to 11.10, ccp4-6.2.0 works well, but coot can't work any more, the following is its tips: COOT_PREFIX is /home/dell/Documents/ccp4-packages/Coot-0.6.2 /home/dell/Documents/ccp4-packages/Coot-0.6.2/bin/coot-real