Re: [COOT] Pointer Atoms - Potassium

2022-12-05 Thread John Smith
Great, thanks! On Fri, Dec 2, 2022 at 6:44 PM Paul Emsley wrote: > > On 02/12/2022 15:30, John Smith wrote: > > Dear all! > I am using Coot 0.9.8.5 EL (ccp4) and I want to add K/potassium ions > during model building. > Adding Na and Cl is straightforward, but if I click on Pointer Atom Type >

Re: [COOT] Pointer Atoms - Potassium

2022-12-02 Thread Paul Emsley
On 02/12/2022 15:30, John Smith wrote: Dear all! I am using Coot 0.9.8.5 EL (ccp4) and I want to add K/potassium ions during model building. Adding Na and Cl is straightforward, but if I click on Pointer Atom Type other, enter K and hit OK, then a grey atom is added, but it does not refine.

Re: [COOT] Pointer Atoms - Potassium

2022-12-02 Thread Sheriff, Steven
John: I recently (22-Nov) pointed out to Paul Emsley that if one entered potassium through the popup menu, it places the "K" of potassium in the wrong column of a PDB file, column 13 rather than column 14. The element is right-justified, so single letter elements use only column 14, but two

[COOT] Pointer Atoms - Potassium

2022-12-02 Thread John Smith
Dear all! I am using Coot 0.9.8.5 EL (ccp4) and I want to add K/potassium ions during model building. Adding Na and Cl is straightforward, but if I click on Pointer Atom Type other, enter K and hit OK, then a grey atom is added, but it does not refine. *Warning: Failed to match the dictionary.*