Re: [COOT] Ligand density fit scores

2015-04-30 Thread Paul Emsley
On 28/04/15 10:41, Lau Sze Yi (SIgN) wrote: Hi, I fitted small molecule ligand into observed electron density using the Find Ligands function and did a density fit analysis. What is considered an acceptable score? You want a density correlation of greater than 0.89 to be better than the m

Re: [COOT] Ligand density fit scores

2015-04-28 Thread Tim Gruene
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Dear Sze Yi, I think Rupp-validation might be more helpful than a score cut-off in your case: Would you take a drug developed based on how the ligand fits the density you are observing? Best, Tim On 04/28/2015 11:41 AM, Lau Sze Yi (SIgN) wrote: > H