Hello,
Just a quick question, is there an easy way to toggle off and on the lines
showing the end and start of a chain were there are missing residues? I have
one initial structure that has a bunch of fragments and the lines go all over
the place making any possible analysis next to
https://pemsley.github.io/coot/blog/2020/06/25/turn-off-missing-loops.html
set_draw_missing_residues_loops(0)
El mié, 3 de nov. de 2021 a la(s) 09:18, Thomas, Leonard M. (lmtho...@ou.edu)
escribió:
> Hello,
>
> Just a quick question, is there an easy way to toggle off and on the lines
>
Hi Coot users-
In one of Paul’s demo videos (https://youtu.be/OTygXRLKb68) he uses
Ctrl-Shift-scroll to advance through molecule representations (color by
molecule, C-a trace, etc). This seems extremely useful to me, and it works when
I try it on a Linux machine, but not on my Mac. It also
Hi All:
I have a structure that has a lot of D-amino acids. When I open the mtz and
pdb it shows me C-beta outlier warning (Molprobity Warnig). I have also
downloaded D-amino acids peptides and corresponding mtz files from the PDB
and got similar warnings.
Can you please guide me how to get rid
On 03/11/2021 23:22, prasun kumar wrote:
Sorry Paul for not putting it more clearly.
After running Refmac5 from CCP4i2, I open the mtz file and pdb in
COOT. There I get a warning message (Picture attached). I can get this
off if I turn off the run Molprobity option in CCP4i2. I was just
On 03/11/2021 22:28, prasun kumar wrote:
I have a structure that has a lot of D-amino acids. When I open the
mtz and pdb
open it in Coot you mean?
it shows me C-beta outlier warning (Molprobity Warnig).
Coot doesn't do that. Are you talking about some other program?
I have also downloaded
Sorry Paul for not putting it more clearly.
After running Refmac5 from CCP4i2, I open the mtz file and pdb in COOT.
There I get a warning message (Picture attached). I can get this off if I
turn off the run Molprobity option in CCP4i2. I was just wondering if I can
get any clue to handle this
Ursula,
I have the same problem when running Coot for Mac (0.9.6 from CCP4, XQuartz
2.8.1) on MacBook Pro (macOS 10.14.6) with an external monitor. I think this
problem only occurs when you also have your laptop open. The Coot display
window is not visible. I know the model window is
