[PathwayCommons/factoid]

2024-05-07 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 9a48a6: 0.27.0

2024-05-07 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 9a48a6725c0a79c985f4262a2f70254b23b5a51e https://github.com/PathwayCommons/factoid/commit/9a48a6725c0a79c985f4262a2f70254b23b5a51e Author: Jeffrey Wong Date: 2024-05-07 (Tue, 07 May 2024

[PathwayCommons/factoid] 3c82d5: Merge pull request #1245 from PathwayCommons/v0.26.0

2024-05-07 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/PathwayCommons/factoid Commit: 3c82d53137ca38273c635e3a00e4bb018ed26b15 https://github.com/PathwayCommons/factoid/commit/3c82d53137ca38273c635e3a00e4bb018ed26b15 Author: Jeffrey Date: 2024-02-02 (Fri, 02 Feb 2024) Changed

[PathwayCommons/factoid] 9a48a6: 0.27.0

2024-05-07 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/v0.27.0 Home: https://github.com/PathwayCommons/factoid Commit: 9a48a6725c0a79c985f4262a2f70254b23b5a51e https://github.com/PathwayCommons/factoid/commit/9a48a6725c0a79c985f4262a2f70254b23b5a51e Author: Jeffrey Wong Date: 2024-05-07 (Tue, 07 May 2024

[PathwayCommons/factoid] 9a48a6: 0.27.0

2024-05-07 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/tags/v0.27.0 Home: https://github.com/PathwayCommons/factoid Commit: 9a48a6725c0a79c985f4262a2f70254b23b5a51e https://github.com/PathwayCommons/factoid/commit/9a48a6725c0a79c985f4262a2f70254b23b5a51e Author: Jeffrey Wong Date: 2024-05-07 (Tue, 07 May 2024

[PathwayCommons/factoid]

2024-05-07 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] efa241: Minor lint warn.

2024-05-07 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: efa2412b7f9427e870aeb692af40b416cb7a53ac https://github.com/PathwayCommons/factoid/commit/efa2412b7f9427e870aeb692af40b416cb7a53ac Author: Jeffrey Wong Date: 2024-05-07 (Tue, 07 May 2024

[PathwayCommons/factoid]

2024-05-03 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 045ff6: Accordion component; FAQ start

2024-05-03 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 045ff6bde6db171bcacb229709c001b8e48066be https://github.com/PathwayCommons/factoid/commit/045ff6bde6db171bcacb229709c001b8e48066be Author: Jeffrey Wong Date: 2024-05-01 (Wed, 01 May 2024

[PathwayCommons/factoid] 67869a: Accommodate large content.

2024-05-02 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1216_faq Home: https://github.com/PathwayCommons/factoid Commit: 67869ab2c72282542fa4b1f0e364d2ff01bc34c8 https://github.com/PathwayCommons/factoid/commit/67869ab2c72282542fa4b1f0e364d2ff01bc34c8 Author: Jeffrey Wong Date: 2024-05-02 (Thu, 02 May 2024

[PathwayCommons/factoid] c60b33: Toggle when header is clicked (not entire content)

2024-05-02 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1216_faq Home: https://github.com/PathwayCommons/factoid Commit: c60b33632d691be0985c2d3fe2a7c1a7f47f17a4 https://github.com/PathwayCommons/factoid/commit/c60b33632d691be0985c2d3fe2a7c1a7f47f17a4 Author: Jeffrey Wong Date: 2024-05-02 (Thu, 02 May 2024

[PathwayCommons/factoid] 71ee68: Accommodate small screen sizes

2024-05-02 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1216_faq Home: https://github.com/PathwayCommons/factoid Commit: 71ee68cf45a5e4255b90db265c60ccab68c45423 https://github.com/PathwayCommons/factoid/commit/71ee68cf45a5e4255b90db265c60ccab68c45423 Author: Jeffrey Wong Date: 2024-05-02 (Thu, 02 May 2024

[PathwayCommons/factoid] 3adb08: Adding in text from FAQ.

2024-05-02 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1216_faq Home: https://github.com/PathwayCommons/factoid Commit: 3adb083469757c7100be08216f176f2e7b34c8f4 https://github.com/PathwayCommons/factoid/commit/3adb083469757c7100be08216f176f2e7b34c8f4 Author: Jeffrey Wong Date: 2024-05-02 (Thu, 02 May 2024

[PathwayCommons/factoid] 045ff6: Accordion component; FAQ start

2024-05-02 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1216_faq Home: https://github.com/PathwayCommons/factoid Commit: 045ff6bde6db171bcacb229709c001b8e48066be https://github.com/PathwayCommons/factoid/commit/045ff6bde6db171bcacb229709c001b8e48066be Author: Jeffrey Wong Date: 2024-05-01 (Wed, 01 May 2024

[PathwayCommons/factoid]

2024-05-01 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] e6cff8: Prettify the relations and present subset in the UI.

2024-04-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: e6cff8f4667bbd13f4a5b6576e70961dd2e99edf https://github.com/PathwayCommons/factoid/commit/e6cff8f4667bbd13f4a5b6576e70961dd2e99edf Author: Jeffrey Wong Date: 2024-04-24 (Wed, 24 Apr 2024

[PathwayCommons/factoid] f297c9: Include fetch response in HTTPStatusError; Log HTT...

2024-04-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: f297c9915ecb52818d6343e6001c7919dd09fa21 https://github.com/PathwayCommons/factoid/commit/f297c9915ecb52818d6343e6001c7919dd09fa21 Author: Jeffrey Wong Date: 2024-04-25 (Thu, 25 Apr 2024

[PathwayCommons/factoid] 3ca56e: Revert update changes.

2024-04-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1251_more-informative-error-logging Home: https://github.com/PathwayCommons/factoid Commit: 3ca56e918350ab0308e703b746a57a859d1b https://github.com/PathwayCommons/factoid/commit/3ca56e918350ab0308e703b746a57a859d1b Author: Jeffrey Wong Date: 2024

[PathwayCommons/factoid] f46e47: ArticleIDError logged at info-level.

2024-04-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1251_more-informative-error-logging Home: https://github.com/PathwayCommons/factoid Commit: f46e4785cfa28ceb8025cb8dbf98d677be3843b0 https://github.com/PathwayCommons/factoid/commit/f46e4785cfa28ceb8025cb8dbf98d677be3843b0 Author: Jeffrey Wong Date: 2024

[PathwayCommons/factoid] f297c9: Include fetch response in HTTPStatusError; Log HTT...

2024-04-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1251_more-informative-error-logging Home: https://github.com/PathwayCommons/factoid Commit: f297c9915ecb52818d6343e6001c7919dd09fa21 https://github.com/PathwayCommons/factoid/commit/f297c9915ecb52818d6343e6001c7919dd09fa21 Author: Jeffrey Wong Date: 2024

[PathwayCommons/factoid] f297c9: Include fetch response in HTTPStatusError; Log HTT...

2024-04-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1251_rate-limit-update Home: https://github.com/PathwayCommons/factoid Commit: f297c9915ecb52818d6343e6001c7919dd09fa21 https://github.com/PathwayCommons/factoid/commit/f297c9915ecb52818d6343e6001c7919dd09fa21 Author: Jeffrey Wong Date: 2024-04-25 (Thu

[PathwayCommons/factoid] 4e28be: Linting.

2024-04-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1251_rate-limit-update Home: https://github.com/PathwayCommons/factoid Commit: 4e28bec594b5873a8d8c080626fb725bafc9df0a https://github.com/PathwayCommons/factoid/commit/4e28bec594b5873a8d8c080626fb725bafc9df0a Author: Jeffrey Wong Date: 2024-04-25 (Thu

[PathwayCommons/factoid] 4a3224: Include fetch response in HTTPStatusError; Log HTT...

2024-04-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1251_rate-limit-update Home: https://github.com/PathwayCommons/factoid Commit: 4a3224861254dcb434aa0baf41956ff0de0f8bad https://github.com/PathwayCommons/factoid/commit/4a3224861254dcb434aa0baf41956ff0de0f8bad Author: Jeffrey Wong Date: 2024-04-25 (Thu

[PathwayCommons/factoid] 722e0b: Min width of related paper to accommodate no abstr...

2024-04-24 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 722e0bc3da034bca790028df3f8443d347a98500 https://github.com/PathwayCommons/factoid/commit/722e0bc3da034bca790028df3f8443d347a98500 Author: Jeffrey Wong Date: 2024-04-24 (Wed, 24 Apr 2024

[PathwayCommons/factoid] 722e0b: Min width of related paper to accommodate no abstr...

2024-04-24 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1249_compressed-relPapers Home: https://github.com/PathwayCommons/factoid Commit: 722e0bc3da034bca790028df3f8443d347a98500 https://github.com/PathwayCommons/factoid/commit/722e0bc3da034bca790028df3f8443d347a98500 Author: Jeffrey Wong Date: 2024-04-24

[PathwayCommons/factoid] b94d70: Improve the formatting of paper relations.

2024-04-24 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1203_citation-relation Home: https://github.com/PathwayCommons/factoid Commit: b94d707ac6de655b44a2d4aa21589891a8cffae5 https://github.com/PathwayCommons/factoid/commit/b94d707ac6de655b44a2d4aa21589891a8cffae5 Author: Jeffrey Wong Date: 2024-04-24 (Wed

[PathwayCommons/factoid] c4febd: Prettify the relations and present subset in the UI.

2024-04-23 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1203_citation-relation Home: https://github.com/PathwayCommons/factoid Commit: c4febda5bdcbe5719235841f81ad49d8ad29f1fb https://github.com/PathwayCommons/factoid/commit/c4febda5bdcbe5719235841f81ad49d8ad29f1fb Author: Jeffrey Wong Date: 2024-04-23 (Tue

[PathwayCommons/factoid]

2024-04-22 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1203_paper-relations-crossref Home: https://github.com/PathwayCommons/factoid To unsubscribe from these emails, change your notification settings at https://github.com/PathwayCommons/factoid/settings/notifications -- You received this message because you

[PathwayCommons/factoid] ae66fd: Map a subset of Crossref relations to the PubMed s...

2024-04-22 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: ae66fd789fc9b1cceb65781efc3c0b9cfa20aba8 https://github.com/PathwayCommons/factoid/commit/ae66fd789fc9b1cceb65781efc3c0b9cfa20aba8 Author: Jeffrey Wong Date: 2024-04-18 (Thu, 18 Apr 2024

[PathwayCommons/factoid] 8aecb5: More intuitive names for relation type variables.

2024-04-22 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1203_paper-relations-crossref Home: https://github.com/PathwayCommons/factoid Commit: 8aecb5b6e6ac27c5806177a42d2737df7b3a16b6 https://github.com/PathwayCommons/factoid/commit/8aecb5b6e6ac27c5806177a42d2737df7b3a16b6 Author: Jeffrey Wong Date: 2024-04-22

[PathwayCommons/factoid] ae66fd: Map a subset of Crossref relations to the PubMed s...

2024-04-18 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1203_paper-relations-crossref Home: https://github.com/PathwayCommons/factoid Commit: ae66fd789fc9b1cceb65781efc3c0b9cfa20aba8 https://github.com/PathwayCommons/factoid/commit/ae66fd789fc9b1cceb65781efc3c0b9cfa20aba8 Author: Jeffrey Wong Date: 2024-04-18

[PathwayCommons/factoid]

2024-04-18 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1203_paper-relations-crossref Home: https://github.com/PathwayCommons/factoid To unsubscribe from these emails, change your notification settings at https://github.com/PathwayCommons/factoid/settings/notifications -- You received this message because you

[PathwayCommons/factoid]

2024-04-18 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1203_paper-relations-pubmed Home: https://github.com/PathwayCommons/factoid To unsubscribe from these emails, change your notification settings at https://github.com/PathwayCommons/factoid/settings/notifications -- You received this message because you

[PathwayCommons/factoid] ca71b5: Capture PubMedArticle attribute CommentsCorrection...

2024-04-18 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: ca71b5be253221c500faa0991753b1f8a0dc65e8 https://github.com/PathwayCommons/factoid/commit/ca71b5be253221c500faa0991753b1f8a0dc65e8 Author: Jeffrey Wong Date: 2024-04-18 (Thu, 18 Apr 2024

[PathwayCommons/factoid] ca71b5: Capture PubMedArticle attribute CommentsCorrection...

2024-04-18 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1203_paper-relations-pubmed Home: https://github.com/PathwayCommons/factoid Commit: ca71b5be253221c500faa0991753b1f8a0dc65e8 https://github.com/PathwayCommons/factoid/commit/ca71b5be253221c500faa0991753b1f8a0dc65e8 Author: Jeffrey Wong Date: 2024-04-18

[PathwayCommons/factoid] 03499c: Improved Hint model and tests.

2024-04-15 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: 03499c971ec02b035b7de515bd0f9e54ac633bad https://github.com/PathwayCommons/factoid/commit/03499c971ec02b035b7de515bd0f9e54ac633bad Author: Jeffrey Wong Date: 2024-04-15 (Mon

[PathwayCommons/factoid] 748b11: Remove unused import; Live tests for hint top-leve...

2024-04-05 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: 748b11bcf470b0b16e32dc6a95d8d1f054e6fec7 https://github.com/PathwayCommons/factoid/commit/748b11bcf470b0b16e32dc6a95d8d1f054e6fec7 Author: Jeffrey Wong Date: 2024-04-05 (Fri

[PathwayCommons/factoid] 9f95b0: Return ALL entities by section.

2024-04-04 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: 9f95b0f5a8891c2f9f2a3df74aa2f042054e1dff https://github.com/PathwayCommons/factoid/commit/9f95b0f5a8891c2f9f2a3df74aa2f042054e1dff Author: Jeffrey Wong Date: 2024-04-04 (Thu

[PathwayCommons/factoid] a5fd30: Iterate over each provider sequentially and fail s...

2024-04-04 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: a5fd306e6aa77e6321a781871556e4a1138199ed https://github.com/PathwayCommons/factoid/commit/a5fd306e6aa77e6321a781871556e4a1138199ed Author: Jeffrey Wong Date: 2024-04-04 (Thu

[PathwayCommons/factoid] 472a0e: Move the pubtator path to a config variable.

2024-04-04 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: 472a0e04c35b9d2401d86c04e4ca9301b851aaf4 https://github.com/PathwayCommons/factoid/commit/472a0e04c35b9d2401d86c04e4ca9301b851aaf4 Author: Jeffrey Wong Date: 2024-04-04 (Thu

[PathwayCommons/factoid] 08e36f: Correct bug in filtering Xrefs

2024-04-03 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: 08e36f88a4a7331a5c93dc0b58e8783169b642a7 https://github.com/PathwayCommons/factoid/commit/08e36f88a4a7331a5c93dc0b58e8783169b642a7 Author: Jeffrey Wong Date: 2024-04-03 (Wed

[PathwayCommons/factoid] 7800c4: Organism order calculation and tests.

2024-04-03 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: 7800c447e708f288aca764c7ce8227d01f9eaa0c https://github.com/PathwayCommons/factoid/commit/7800c447e708f288aca764c7ce8227d01f9eaa0c Author: Jeffrey Wong Date: 2024-04-03 (Wed

[PathwayCommons/factoid] 9a558a: Prevent semicolon delimited entries as xref id.

2024-04-03 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: 9a558a06ca646aaa9b186e362efff1ebb79e22d2 https://github.com/PathwayCommons/factoid/commit/9a558a06ca646aaa9b186e362efff1ebb79e22d2 Author: Jeffrey Wong Date: 2024-04-03 (Wed

[PathwayCommons/factoid] cc83f6: Drop commented out code for unique by entity text.

2024-04-02 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: cc83f6952fb98b25e18fb5751df64edd3ab730e4 https://github.com/PathwayCommons/factoid/commit/cc83f6952fb98b25e18fb5751df64edd3ab730e4 Author: Jeffrey Wong Date: 2024-04-02 (Tue

[PathwayCommons/factoid] bd8a38: Standardize the parameters for any hint provider (...

2024-03-28 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: bd8a3821c0a55d4f8e973d27930f4b9d9f835eba https://github.com/PathwayCommons/factoid/commit/bd8a3821c0a55d4f8e973d27930f4b9d9f835eba Author: Jeffrey Wong Date: 2024-03-28 (Thu

[PathwayCommons/factoid] f60b16: Hint 'texts' field listing all mentions for a giv...

2024-03-28 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: f60b1698eecd7b1365ec7328e45b294753594233 https://github.com/PathwayCommons/factoid/commit/f60b1698eecd7b1365ec7328e45b294753594233 Author: Jeffrey Wong Date: 2024-03-28 (Thu

[PathwayCommons/factoid] 14d809: Use the BioCJson information about database.

2024-03-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: 14d80932a1270113911f36365753a00b8d2a1aa7 https://github.com/PathwayCommons/factoid/commit/14d80932a1270113911f36365753a00b8d2a1aa7 Author: Jeffrey Wong Date: 2024-03-25 (Mon

[PathwayCommons/factoid] 5c021a: Utility with db identifier metadata.

2024-03-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: 5c021a107d5a0d516d9c636cb7fa9c02f2299f58 https://github.com/PathwayCommons/factoid/commit/5c021a107d5a0d516d9c636cb7fa9c02f2299f58 Author: Jeffrey Wong Date: 2024-03-25 (Mon

[PathwayCommons/factoid] ce0d5e: Refine definition of a valid xref.

2024-03-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: ce0d5ed5dfe8d4cfbdb27f00c6662dc25168268a https://github.com/PathwayCommons/factoid/commit/ce0d5ed5dfe8d4cfbdb27f00c6662dc25168268a Author: Jeffrey Wong Date: 2024-03-25 (Mon

[PathwayCommons/factoid] 764b6b: Ignore xrefs with a placeholder ID (e.g. -)

2024-03-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: 764b6b978983fa021da386b656269629a41d683b https://github.com/PathwayCommons/factoid/commit/764b6b978983fa021da386b656269629a41d683b Author: Jeffrey Wong Date: 2024-03-25 (Mon

[PathwayCommons/factoid] 377c8d: Reorg tests under pubtator

2024-03-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: 377c8de87f2a2dac82be6b94e9e3df874097efe6 https://github.com/PathwayCommons/factoid/commit/377c8de87f2a2dac82be6b94e9e3df874097efe6 Author: Jeffrey Wong Date: 2024-03-25 (Mon

[PathwayCommons/factoid] 009e8c: Clean up the Hint model.

2024-03-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: 009e8c31c7394ae3f922503149ff40c23ef9a0f3 https://github.com/PathwayCommons/factoid/commit/009e8c31c7394ae3f922503149ff40c23ef9a0f3 Author: Jeffrey Wong Date: 2024-03-25 (Mon

[PathwayCommons/factoid] e08c3f: Mock tests for get.

2024-03-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: e08c3f4d44cf6d03e5d1fc3d6379f16c395142ab https://github.com/PathwayCommons/factoid/commit/e08c3f4d44cf6d03e5d1fc3d6379f16c395142ab Author: Jeffrey Wong Date: 2024-03-25 (Mon

[PathwayCommons/factoid] 81b084: Non-Species annotations are unique to section.

2024-03-22 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: 81b08448266a54c550bc508d4df62e161c00c630 https://github.com/PathwayCommons/factoid/commit/81b08448266a54c550bc508d4df62e161c00c630 Author: Jeffrey Wong Date: 2024-03-22 (Fri

[PathwayCommons/factoid] f99988: Revert changes to request form.

2024-03-21 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] c7a483: Provide a wrapper for the get and map

2024-03-21 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: c7a4837f6cea08a1d2273f8c74f482426560c0bb https://github.com/PathwayCommons/factoid/commit/c7a4837f6cea08a1d2273f8c74f482426560c0bb Author: Jeffrey Wong Date: 2024-03-21 (Thu

[PathwayCommons/factoid] 388db4: Account for possible empty response from PubTator ...

2024-03-21 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: 388db49e2ddb45c3bc713059994ce16a18e84575 https://github.com/PathwayCommons/factoid/commit/388db49e2ddb45c3bc713059994ce16a18e84575 Author: Jeffrey Wong Date: 2024-03-21 (Thu

[PathwayCommons/factoid] b92252: First commit.

2024-03-21 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1148_pubtator-service Home: https://github.com/PathwayCommons/factoid Commit: b922523f48f2770a327deba0b203a1d5e45aab9a https://github.com/PathwayCommons/factoid/commit/b922523f48f2770a327deba0b203a1d5e45aab9a Author: Jeffrey Wong Date: 2024-03-20 (Wed

[PathwayCommons/factoid]

2024-03-20 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] fb18fa: Merge pull request #1115 from PathwayCommons/v0.22.0

2024-03-20 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: fb18fa57cfeaedef71ada09e28ec40054ebb167f https://github.com/PathwayCommons/factoid/commit/fb18fa57cfeaedef71ada09e28ec40054ebb167f Author: Jeffrey Date: 2023-02-06 (Mon, 06 Feb 2023

[PathwayCommons/factoid] 45e3bd: lint

2024-03-20 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] cc5f6f: Lint

2024-03-20 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/diff-master Home: https://github.com/PathwayCommons/factoid Commit: cc5f6fab4ad9e30614f9e6db1defa836445f140f https://github.com/PathwayCommons/factoid/commit/cc5f6fab4ad9e30614f9e6db1defa836445f140f Author: Jeffrey Wong Date: 2024-03-20 (Wed, 20 Mar 2024

[PathwayCommons/factoid] fb18fa: Merge pull request #1115 from PathwayCommons/v0.22.0

2024-03-20 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/diff-master Home: https://github.com/PathwayCommons/factoid Commit: fb18fa57cfeaedef71ada09e28ec40054ebb167f https://github.com/PathwayCommons/factoid/commit/fb18fa57cfeaedef71ada09e28ec40054ebb167f Author: Jeffrey Date: 2023-02-06 (Mon, 06 Feb 2023

[PathwayCommons/factoid]

2024-03-20 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid]

2024-03-20 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid]

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[PathwayCommons/factoid]

2024-03-20 Thread 'Jeffrey' via cytoscape-cvs
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2024-03-20 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid]

2024-03-20 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid]

2024-03-20 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid]

2024-03-20 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] f36409: 0.26.0

2024-02-02 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: f36409ce80988fec3371549b15138476514acdf1 https://github.com/PathwayCommons/factoid/commit/f36409ce80988fec3371549b15138476514acdf1 Author: Jeffrey Wong Date: 2024-02-02 (Fri, 02 Feb 2024

[PathwayCommons/factoid] af2414: Merge pull request #1232 from PathwayCommons/v0.25.0

2024-02-02 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/PathwayCommons/factoid Commit: af2414ae8b9a14fe9593e1c8a4213d213832cf3c https://github.com/PathwayCommons/factoid/commit/af2414ae8b9a14fe9593e1c8a4213d213832cf3c Author: Jeffrey Date: 2023-12-06 (Wed, 06 Dec 2023) Changed

[PathwayCommons/factoid] f36409: 0.26.0

2024-02-02 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/v0.26.0 Home: https://github.com/PathwayCommons/factoid Commit: f36409ce80988fec3371549b15138476514acdf1 https://github.com/PathwayCommons/factoid/commit/f36409ce80988fec3371549b15138476514acdf1 Author: Jeffrey Wong Date: 2024-02-02 (Fri, 02 Feb 2024

[PathwayCommons/factoid] f36409: 0.26.0

2024-02-02 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/tags/v0.26.0 Home: https://github.com/PathwayCommons/factoid Commit: f36409ce80988fec3371549b15138476514acdf1 https://github.com/PathwayCommons/factoid/commit/f36409ce80988fec3371549b15138476514acdf1 Author: Jeffrey Wong Date: 2024-02-02 (Fri, 02 Feb 2024

[PathwayCommons/factoid] ad7ab0: For preprints, fallback to publisher if no title e...

2024-01-25 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: ad7ab041654f6728f87373755b66fbb6052a280c https://github.com/PathwayCommons/factoid/commit/ad7ab041654f6728f87373755b66fbb6052a280c Author: Jeffrey Wong Date: 2024-01-24 (Wed, 24 Jan 2024

[PathwayCommons/factoid] ad7ab0: For preprints, fallback to publisher if no title e...

2024-01-24 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1236_missing-elife-title Home: https://github.com/PathwayCommons/factoid Commit: ad7ab041654f6728f87373755b66fbb6052a280c https://github.com/PathwayCommons/factoid/commit/ad7ab041654f6728f87373755b66fbb6052a280c Author: Jeffrey Wong Date: 2024-01-24 (Wed

[PathwayCommons/factoid] ffbdee: Hide uninformative 'submitted/public' admin icon.

2024-01-08 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: ffbdee8e52ba12d5658ed87fa8bac862b31413cd https://github.com/PathwayCommons/factoid/commit/ffbdee8e52ba12d5658ed87fa8bac862b31413cd Author: Jeffrey Wong Date: 2024-01-08 (Mon, 08 Jan 2024

[PathwayCommons/factoid] ffbdee: Hide uninformative 'submitted/public' admin icon.

2024-01-08 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] cd099c: Generate as complete as possible publication xref ...

2023-12-11 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: cd099cbd093957f2b3bcc56f540621a6737a761a https://github.com/PathwayCommons/factoid/commit/cd099cbd093957f2b3bcc56f540621a6737a761a Author: Jeffrey Wong Date: 2023-12-07 (Thu, 07 Dec 2023

[PathwayCommons/factoid] cd099c: Generate as complete as possible publication xref ...

2023-12-07 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1218_preprint-publicationXref Home: https://github.com/PathwayCommons/factoid Commit: cd099cbd093957f2b3bcc56f540621a6737a761a https://github.com/PathwayCommons/factoid/commit/cd099cbd093957f2b3bcc56f540621a6737a761a Author: Jeffrey Wong Date: 2023-12-07

[PathwayCommons/factoid]

2023-12-07 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 5451b4: Bump socket.io-parser and socket.io-client

2023-12-06 Thread 'dependabot[bot]' via cytoscape-cvs
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[PathwayCommons/factoid] 196c0f: 0.25.0

2023-12-06 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 196c0f34e486ccbc3d87e94c3158f0de085440ef https://github.com/PathwayCommons/factoid/commit/196c0f34e486ccbc3d87e94c3158f0de085440ef Author: Jeffrey Wong Date: 2023-12-06 (Wed, 06 Dec 2023

[PathwayCommons/factoid] 9e9fe2: Merge pull request #1191 from PathwayCommons/v0.24.0

2023-12-06 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/master Home: https://github.com/PathwayCommons/factoid Commit: 9e9fe2806a678af1ccaac77b86e05eaefa6dbb90 https://github.com/PathwayCommons/factoid/commit/9e9fe2806a678af1ccaac77b86e05eaefa6dbb90 Author: Jeffrey Date: 2023-07-04 (Tue, 04 Jul 2023) Changed

[PathwayCommons/factoid] 196c0f: 0.25.0

2023-12-06 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/v0.25.0 Home: https://github.com/PathwayCommons/factoid Commit: 196c0f34e486ccbc3d87e94c3158f0de085440ef https://github.com/PathwayCommons/factoid/commit/196c0f34e486ccbc3d87e94c3158f0de085440ef Author: Jeffrey Wong Date: 2023-12-06 (Wed, 06 Dec 2023

[PathwayCommons/factoid] 196c0f: 0.25.0

2023-12-06 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/tags/v0.25.0 Home: https://github.com/PathwayCommons/factoid Commit: 196c0f34e486ccbc3d87e94c3158f0de085440ef https://github.com/PathwayCommons/factoid/commit/196c0f34e486ccbc3d87e94c3158f0de085440ef Author: Jeffrey Wong Date: 2023-12-06 (Wed, 06 Dec 2023

[PathwayCommons/factoid]

2023-12-06 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 321b5c: No hyphens in db name

2023-12-06 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 321b5c: No hyphens in db name

2023-12-06 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid]

2023-12-06 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 41d8c7: Cover cases where there is a preprint, no paper ID

2023-12-05 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/unstable Home: https://github.com/PathwayCommons/factoid Commit: 41d8c78f9c65232ff5bdc965a765e3107d317599 https://github.com/PathwayCommons/factoid/commit/41d8c78f9c65232ff5bdc965a765e3107d317599 Author: Jeffrey Wong Date: 2023-12-04 (Mon, 04 Dec 2023

[PathwayCommons/factoid] 1ea323: Always provide a Google Scholar link based on title

2023-12-04 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1215_relPapers-preprints Home: https://github.com/PathwayCommons/factoid Commit: 1ea3236a36e1c3e2458fd91add68c821d6676e7e https://github.com/PathwayCommons/factoid/commit/1ea3236a36e1c3e2458fd91add68c821d6676e7e Author: Jeffrey Wong Date: 2023-12-04 (Mon

[PathwayCommons/factoid] 41d8c7: Cover cases where there is a preprint, no paper ID

2023-12-04 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1215_relPapers-preprints Home: https://github.com/PathwayCommons/factoid Commit: 41d8c78f9c65232ff5bdc965a765e3107d317599 https://github.com/PathwayCommons/factoid/commit/41d8c78f9c65232ff5bdc965a765e3107d317599 Author: Jeffrey Wong Date: 2023-12-04 (Mon

[PathwayCommons/factoid]

2023-12-04 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid]

2023-12-04 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid]

2023-12-04 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 048e38: Remove unused import

2023-12-04 Thread 'Jeffrey' via cytoscape-cvs
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[PathwayCommons/factoid] 23e51f: Provide structured output for relation JSON

2023-12-04 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1203_paper-relations Home: https://github.com/PathwayCommons/factoid Commit: 23e51fd86a929fabab6ea17fdb6c772bca9282c6 https://github.com/PathwayCommons/factoid/commit/23e51fd86a929fabab6ea17fdb6c772bca9282c6 Author: Jeffrey Wong Date: 2023-12-04 (Mon, 04

[PathwayCommons/factoid] f31fce: disable layout via keyboard.

2023-12-01 Thread 'Jeffrey' via cytoscape-cvs
Branch: refs/heads/iss1203_paper-relations Home: https://github.com/PathwayCommons/factoid Commit: f31fce32017714d1a2dfbf1d239df8e4c33806b6 https://github.com/PathwayCommons/factoid/commit/f31fce32017714d1a2dfbf1d239df8e4c33806b6 Author: Jeffrey Wong Date: 2023-09-08 (Fri, 08

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