See <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/542/>
------------------------------------------ Started by timer Building in workspace <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/> > git rev-parse --is-inside-work-tree # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url > https://github.com/cytoscape/cytoscape-gui-distribution.git # timeout=10 Fetching upstream changes from https://github.com/cytoscape/cytoscape-gui-distribution.git > git --version # timeout=10 > git -c core.askpass=true fetch --tags --progress > https://github.com/cytoscape/cytoscape-gui-distribution.git > +refs/heads/*:refs/remotes/origin/* > git rev-parse refs/remotes/origin/release/3.5.0^{commit} # timeout=10 > git rev-parse refs/remotes/origin/origin/release/3.5.0^{commit} # timeout=10 Checking out Revision 498169082f768d6b1976de900640e4b53da21e74 (refs/remotes/origin/release/3.5.0) > git config core.sparsecheckout # timeout=10 > git checkout -f 498169082f768d6b1976de900640e4b53da21e74 > git rev-list 498169082f768d6b1976de900640e4b53da21e74 # timeout=10 > git tag -a -f -m Jenkins Build #542 > jenkins-next-release-cytoscape-3-gui-distribution-542 # timeout=10 Parsing POMs [workspace] $ /opt/jdk1.8.0_45/bin/java -Djava.awt.headless=true -Xmx2048M -XX:MaxPermSize=512M -cp /opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.6.jar:/opt/maven/boot/plexus-classworlds-2.4.jar org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven /var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.33.jar /opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.6.jar /opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.6.jar 58818 Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; support was removed in 8.0 <===[JENKINS REMOTING CAPACITY]===> channel started log4j:WARN No appenders could be found for logger (org.apache.commons.beanutils.converters.BooleanConverter). log4j:WARN Please initialize the log4j system properly. Executing Maven: -B -f <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/pom.xml> clean deploy -Pall [INFO] Scanning for projects... [INFO] ------------------------------------------------------------------------ [INFO] Reactor Build Order: [INFO] [INFO] Cytoscape Desktop Application Distribution [INFO] Cytoscape Third-Party Dependencies (third-party) [INFO] SplashScreen Launcher [INFO] Cytoscape Launcher [INFO] Splash Updater [INFO] Cytoscape Command Line Provider Implementation [INFO] Cytoscape Diagnostics [INFO] Cytoscape Branding [INFO] Cytoscape Application Implementation Metadata [INFO] Cytoscape GUI-Distribution Integration Test (integration-test) [INFO] Cytoscape Feature Repository [INFO] Cytoscape Karaf Distribution [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Desktop Application Distribution 3.5.1 [INFO] ------------------------------------------------------------------------ [INFO] [INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ parent --- [WARNING] Failed to getClass for org.apache.maven.plugin.source.SourceJarMojo [INFO] [INFO] --- maven-source-plugin:2.4:jar (attach-sources) @ parent --- [INFO] [INFO] --- maven-install-plugin:2.3.1:install (default-install) @ parent --- [INFO] Installing <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/pom.xml> to /opt/tomcat-home/.m2/repository/org/cytoscape/distribution/parent/3.5.1/parent-3.5.1.pom [INFO] [INFO] --- maven-deploy-plugin:2.5:deploy (default-deploy) @ parent --- Uploading: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/distribution/parent/3.5.1/parent-3.5.1.pom Uploaded: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/distribution/parent/3.5.1/parent-3.5.1.pom (3 KB at 15.7 KB/sec) Downloading: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/distribution/parent/maven-metadata.xml Downloaded: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/distribution/parent/maven-metadata.xml (973 B at 5.8 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/distribution/parent/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/distribution/parent/maven-metadata.xml (973 B at 9.2 KB/sec) [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Third-Party Dependencies (third-party) 3.5.1 [INFO] ------------------------------------------------------------------------ [INFO] [INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ third-party --- [INFO] Deleting <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/third-party/target> [INFO] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ third-party --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/third-party/src/main/resources> [INFO] [INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ third-party --- [INFO] No sources to compile [INFO] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ third-party --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/third-party/src/test/resources> [INFO] [INFO] --- maven-compiler-plugin:3.3:testCompile (default-testCompile) @ third-party --- [INFO] No sources to compile [INFO] [INFO] --- maven-surefire-plugin:2.12.4:test (default-test) @ third-party --- [INFO] No tests to run. [JENKINS] Recording test results[INFO] [INFO] --- maven-bundle-plugin:3.0.0:bundle (default-bundle) @ third-party --- [WARNING] Bundle org.cytoscape.distribution:third-party:bundle:3.5.1 : Invalid package name: 'org.jdesktop.swingx.autocomplete.doc-files' [WARNING] Failed to getClass for org.apache.maven.plugin.source.SourceJarMojo [INFO] [INFO] --- maven-source-plugin:2.4:jar (attach-sources) @ third-party --- [INFO] No sources in project. Archive not created. [INFO] [INFO] --- maven-bundle-plugin:3.0.0:bundle (default) @ third-party --- [WARNING] Bundle org.cytoscape.distribution:third-party:bundle:3.5.1 : Invalid package name: 'org.jdesktop.swingx.autocomplete.doc-files' [INFO] [INFO] --- maven-install-plugin:2.5.1:install (default-install) @ third-party --- [INFO] Installing <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/third-party/target/third-party-3.5.1.jar> to /opt/tomcat-home/.m2/repository/org/cytoscape/distribution/third-party/3.5.1/third-party-3.5.1.jar [INFO] Installing <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/third-party/pom.xml> to /opt/tomcat-home/.m2/repository/org/cytoscape/distribution/third-party/3.5.1/third-party-3.5.1.pom [INFO] [INFO] --- maven-bundle-plugin:3.0.0:install (default-install) @ third-party --- [WARNING] Exception while updating local OBR: Unable to read repository xml: file:/opt/tomcat-home/.m2/repository/repository.xml org.apache.maven.plugin.MojoExecutionException: Unable to read repository xml: file:/opt/tomcat-home/.m2/repository/repository.xml at org.apache.felix.obrplugin.ObrUpdate.parseRepositoryXml(ObrUpdate.java:324) at org.apache.felix.obrplugin.ObrInstall.execute(ObrInstall.java:131) at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:101) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:209) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59) at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156) at org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:117) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:497) at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329) at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239) at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:178) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:497) at hudson.maven.Maven3Builder.call(Maven3Builder.java:136) at hudson.maven.Maven3Builder.call(Maven3Builder.java:71) at hudson.remoting.UserRequest.perform(UserRequest.java:118) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:328) at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:745) Caused by: org.xmlpull.v1.XmlPullParserException: unexpected type (position:END_DOCUMENT null@1:0 in java.io.InputStreamReader@27f75124) at org.kxml2.io.KXmlParser.exception(Unknown Source) at org.kxml2.io.KXmlParser.nextTag(Unknown Source) at org.apache.felix.bundlerepository.impl.PullParser.parseRepository(PullParser.java:43) at org.apache.felix.bundlerepository.impl.DataModelHelperImpl.repository(DataModelHelperImpl.java:147) at org.apache.felix.bundlerepository.impl.DataModelHelperImpl.repository(DataModelHelperImpl.java:118) at org.apache.felix.obrplugin.ObrUpdate.parseRepositoryXml(ObrUpdate.java:316) ... 33 more [INFO] [INFO] --- maven-deploy-plugin:2.8.1:deploy (default-deploy) @ third-party --- Uploading: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/distribution/third-party/3.5.1/third-party-3.5.1.jar Uploaded: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/distribution/third-party/3.5.1/third-party-3.5.1.jar (18230 KB at 22787.2 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/distribution/third-party/3.5.1/third-party-3.5.1.pom Uploaded: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/distribution/third-party/3.5.1/third-party-3.5.1.pom (10 KB at 138.7 KB/sec) Downloading: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/distribution/third-party/maven-metadata.xml Downloaded: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/distribution/third-party/maven-metadata.xml (546 B at 9.7 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/distribution/third-party/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/distribution/third-party/maven-metadata.xml (546 B at 16.2 KB/sec) [INFO] [INFO] --- maven-bundle-plugin:3.0.0:deploy (default-deploy) @ third-party --- [INFO] Remote OBR update disabled (enable with -DremoteOBR) [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building SplashScreen Launcher 3.5.1 [INFO] ------------------------------------------------------------------------ Downloading: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/launcher/3.5.0/launcher-3.5.0.pom Downloading: http://code.cytoscape.org/nexus/content/repositories/thirdparty/org/cytoscape/launcher/3.5.0/launcher-3.5.0.pom Downloading: http://code.cytoscape.org/nexus/content/repositories/biopax-release/org/cytoscape/launcher/3.5.0/launcher-3.5.0.pom Downloading: http://code.cytoscape.org/nexus/content/repositories/ops4j-release/org/cytoscape/launcher/3.5.0/launcher-3.5.0.pom Downloading: http://code.cytoscape.org/nexus/content/repositories/spring-osgi/org/cytoscape/launcher/3.5.0/launcher-3.5.0.pom Downloading: http://code.cytoscape.org/nexus/content/repositories/spring-osgi-external/org/cytoscape/launcher/3.5.0/launcher-3.5.0.pom Downloading: http://maven.itextpdf.com/org/cytoscape/launcher/3.5.0/launcher-3.5.0.pom Downloading: http://code.cytoscape.org/nexus/content/repositories/zodiac-release/org/cytoscape/launcher/3.5.0/launcher-3.5.0.pom Downloading: http://code.cytoscape.org/nexus/content/repositories/zodiac-milestone/org/cytoscape/launcher/3.5.0/launcher-3.5.0.pom Downloading: http://code.cytoscape.org/nexus/content/repositories/sonatype-oss/org/cytoscape/launcher/3.5.0/launcher-3.5.0.pom Downloading: http://code.cytoscape.org/nexus/content/repositories/ebi/org/cytoscape/launcher/3.5.0/launcher-3.5.0.pom Downloading: http://repo1.maven.org/maven2/org/cytoscape/launcher/3.5.0/launcher-3.5.0.pom [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary: [INFO] [INFO] Cytoscape Desktop Application Distribution ........ SUCCESS [2.636s] [INFO] Cytoscape Third-Party Dependencies (third-party) .. SUCCESS [56.971s] [INFO] SplashScreen Launcher ............................. FAILURE [0.764s] [INFO] Cytoscape Launcher ................................ SKIPPED [INFO] Splash Updater .................................... SKIPPED [INFO] Cytoscape Command Line Provider Implementation .... SKIPPED [INFO] Cytoscape Diagnostics ............................. SKIPPED [INFO] Cytoscape Branding ................................ SKIPPED [INFO] Cytoscape Application Implementation Metadata ..... SKIPPED [INFO] Cytoscape GUI-Distribution Integration Test (integration-test) SKIPPED [INFO] Cytoscape Feature Repository ...................... SKIPPED [INFO] Cytoscape Karaf Distribution ...................... SKIPPED [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 1:03.132s [INFO] Finished at: Tue Aug 08 20:21:26 UTC 2017 [INFO] Final Memory: 70M/538M [INFO] ------------------------------------------------------------------------ [ERROR] Failed to execute goal on project splash-launcher: Could not resolve dependencies for project org.cytoscape.gui-distribution:splash-launcher:jar:3.5.1: Failed to collect dependencies for [org.cytoscape:launcher:jar:3.5.0 (compile)]: Failed to read artifact descriptor for org.cytoscape:launcher:jar:3.5.0: Could not transfer artifact org.cytoscape:launcher:pom:3.5.0 from/to itextpdf.com (http://maven.itextpdf.com/): Access denied to: http://maven.itextpdf.com/org/cytoscape/launcher/3.5.0/launcher-3.5.0.pom -> [Help 1] [ERROR] [ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch. [ERROR] Re-run Maven using the -X switch to enable full debug logging. [ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/DependencyResolutionException [ERROR] [ERROR] After correcting the problems, you can resume the build with the command [ERROR] mvn <goals> -rf :splash-launcher [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/branding/pom.xml> to org.cytoscape.distribution/branding/3.5.1/branding-3.5.1.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/third-party/pom.xml> to org.cytoscape.distribution/third-party/3.5.1/third-party-3.5.1.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/third-party/target/third-party-3.5.1.jar> to org.cytoscape.distribution/third-party/3.5.1/third-party-3.5.1.jar [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/features/pom.xml> to org.cytoscape.distribution/features/3.5.1/features-3.5.1.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/splash-launcher/pom.xml> to org.cytoscape.gui-distribution/splash-launcher/3.5.1/splash-launcher-3.5.1.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/assembly/pom.xml> to org.cytoscape.distribution/cytoscape/3.5.1/cytoscape-3.5.1.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/launcher/pom.xml> to org.cytoscape.distribution/karaf-launcher/3.5.1/karaf-launcher-3.5.1.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/diagnostics/pom.xml> to org.cytoscape.distribution/diagnostics-impl/3.5.1/diagnostics-impl-3.5.1.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/pom.xml> to org.cytoscape.distribution/parent/3.5.1/parent-3.5.1.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/integration-test/pom.xml> to org.cytoscape.distribution/integration-test/3.5.1/integration-test-3.5.1.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/application-metadata-impl/pom.xml> to org.cytoscape.distribution/application-metadata-impl/3.5.1/application-metadata-impl-3.5.1.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/cmdline-impl/pom.xml> to org.cytoscape.distribution/cmdline-impl/3.5.1/cmdline-impl-3.5.1.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/next-release-cytoscape-3-gui-distribution/ws/splash-updater-impl/pom.xml> to org.cytoscape.distribution/splash-updater-impl/3.5.1/splash-updater-impl-3.5.1.pom Sending e-mails to: cytoscape-cvs@googlegroups.com channel stopped -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to cytoscape-cvs+unsubscr...@googlegroups.com. To post to this group, send email to cytoscape-cvs@googlegroups.com. Visit this group at https://groups.google.com/group/cytoscape-cvs. For more options, visit https://groups.google.com/d/optout.
