[deal.II] Re: error running after update

2018-04-26 Thread Jane Lee
Daniel, Denis, Thanks for all your help. I did re-install the current development version. Problem was with the new update on command line tools in XCode, so with the current development version and downgrading the command line tools and xcode for now has worked. On Tuesday, April 24, 2018

[deal.II] Re: error running after update

2018-04-24 Thread Denis Davydov
p.s. given recent updates to petsc/slepc 3.9 you would need to install a current development version of deal.II, i.e. spack install dealii@develop The soon-to-be-release 9.0 will support new petsc/slepc. On Wednesday, April 25, 2018 at 12:04:06 AM UTC+2, Denis Davydov wrote: > > @Jane > > If you

[deal.II] Re: error running after update

2018-04-24 Thread Denis Davydov
@Jane If you need to get it going soon, try following https://github.com/dealii/dealii/wiki/deal.II-in-Spack Roughly it's only 3 steps (assuming that you have XCode and command-line tools): 1. install gcc with spack 2. configure gfortran to be used with clang

[deal.II] Re: error running after update

2018-04-24 Thread Daniel Arndt
Jane, this looks like you are using a compiler (clang on macOS?) that doesn't define std::auto_ptr anymore and the used boost library doesn't detect this. A recent developer version (there will soon be a release) should circumvent the problem. How did you install deal.II? Are you using spack