Hello, I tried installing deal.ii today. Installation went fine without any errors however when I did make test, it failed all 6 tests. What should I do? Any help is highly appreciated. Thanks!
The error I get is as follows: Running quicktests... Test project /home/japan/dealii/build/tests/quick_tests Start 1: step.debug 1/6 Test #1: step.debug .......................***Failed 6.59 sec make[7]: *** [tests/quick_tests/CMakeFiles/step.debug.run] Error 1 make[6]: *** [tests/quick_tests/CMakeFiles/step.debug.run.dir/all] Error 2 make[5]: *** [tests/quick_tests/CMakeFiles/step.debug.run.dir/rule] Error 2 make[4]: *** [step.debug.run] Error 2 Test step.debug: RUN =============================== OUTPUT BEGIN =============================== [ 0%] Built target kill-step.debug-OK [ 0%] Built target obj_non_matching_inst [ 2%] Built target obj_non_matching_debug [ 11%] Built target obj_boost_serialization_debug [ 11%] Built target obj_boost_system_debug [ 13%] Built target obj_boost_iostreams_debug [ 15%] Built target obj_muparser_debug [ 15%] Built target expand_instantiations_exe [ 20%] Built target obj_numerics_inst [ 28%] Built target obj_numerics_debug [ 37%] Built target obj_fe_inst [ 48%] Built target obj_fe_debug [ 51%] Built target obj_dofs_inst [ 53%] Built target obj_dofs_debug [ 57%] Built target obj_lac_inst [ 66%] Built target obj_lac_debug [ 68%] Built target obj_base_inst [ 82%] Built target obj_base_debug [ 86%] Built target obj_grid_inst [ 88%] Built target obj_grid_debug [ 88%] Built target obj_hp_inst [ 91%] Built target obj_hp_debug [ 93%] Built target obj_multigrid_inst [ 95%] Built target obj_multigrid_debug [ 97%] Built target obj_distributed_inst [ 97%] Built target obj_distributed_debug [ 97%] Built target obj_algorithms_inst [ 97%] Built target obj_algorithms_debug [ 97%] Built target obj_matrix_free_inst [ 97%] Built target obj_matrix_free_debug [ 97%] Built target obj_meshworker_inst [ 97%] Built target obj_meshworker_debug [ 97%] Built target obj_opencascade_inst [100%] Built target obj_opencascade_debug [100%] Built target obj_physics_inst [100%] Built target obj_physics_debug [100%] Built target obj_physics_elasticity_inst [100%] Built target obj_physics_elasticity_debug [100%] Built target deal_II.g [100%] Built target step.debug step.debug: RUN failed. Output: ./step.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `CXXABI_1.3.9' not found (required by ./step.debug) ./step.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by ./step.debug) ./step.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by ./step.debug) ./step.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `CXXABI_1.3.9' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./step.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./step.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./step.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `CXXABI_1.3.8' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./step.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by /usr/lib/x86_64-linux-gnu/libtbb.so.2) tests/quick_tests/CMakeFiles/step.debug.run.dir/build.make:57: recipe for target 'tests/quick_tests/CMakeFiles/step.debug.run' failed CMakeFiles/Makefile2:10014: recipe for target 'tests/quick_tests/CMakeFiles/step.debug.run.dir/all' failed CMakeFiles/Makefile2:10021: recipe for target 'tests/quick_tests/CMakeFiles/step.debug.run.dir/rule' failed Makefile:3425: recipe for target 'step.debug.run' failed step.debug: ****** RUN failed ******* =============================== OUTPUT END =============================== Expected stage PASSED - aborting CMake Error at /home/japan/dealii/cmake/scripts/run_test.cmake:140 (MESSAGE): *** abort Start 2: step.release 2/6 Test #2: step.release .....................***Failed 4.57 sec make[7]: *** [tests/quick_tests/CMakeFiles/step.release.run] Error 1 make[6]: *** [tests/quick_tests/CMakeFiles/step.release.run.dir/all] Error 2 make[5]: *** [tests/quick_tests/CMakeFiles/step.release.run.dir/rule] Error 2 make[4]: *** [step.release.run] Error 2 Test step.release: RUN =============================== OUTPUT BEGIN =============================== [ 0%] Built target kill-step.release-OK [ 0%] Built target obj_non_matching_inst [ 0%] Built target obj_non_matching_release [ 9%] Built target obj_boost_serialization_release [ 9%] Built target obj_boost_system_release [ 9%] Built target obj_boost_iostreams_release [ 9%] Built target obj_muparser_release [ 9%] Built target expand_instantiations_exe [ 14%] Built target obj_numerics_inst [ 23%] Built target obj_numerics_release [ 33%] Built target obj_fe_inst [ 45%] Built target obj_fe_release [ 47%] Built target obj_dofs_inst [ 50%] Built target obj_dofs_release [ 54%] Built target obj_lac_inst [ 61%] Built target obj_lac_release [ 64%] Built target obj_base_inst [ 76%] Built target obj_base_release [ 80%] Built target obj_grid_inst [ 83%] Built target obj_grid_release [ 83%] Built target obj_hp_inst [ 85%] Built target obj_hp_release [ 88%] Built target obj_multigrid_inst [ 90%] Built target obj_multigrid_release [ 92%] Built target obj_distributed_inst [ 95%] Built target obj_distributed_release [ 95%] Built target obj_algorithms_inst [ 95%] Built target obj_algorithms_release [ 95%] Built target obj_matrix_free_inst [ 97%] Built target obj_matrix_free_release [ 97%] Built target obj_meshworker_inst [ 97%] Built target obj_meshworker_release [ 97%] Built target obj_opencascade_inst [ 97%] Built target obj_opencascade_release [ 97%] Built target obj_physics_inst [ 97%] Built target obj_physics_release [ 97%] Built target obj_physics_elasticity_inst [100%] Built target obj_physics_elasticity_release [100%] Built target deal_II [100%] Built target step.release step.release: RUN failed. Output: ./step.release: /home/japan/anaconda3/lib/libstdc++.so.6: version `CXXABI_1.3.9' not found (required by ./step.release) ./step.release: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by ./step.release) ./step.release: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by ./step.release) ./step.release: /home/japan/anaconda3/lib/libstdc++.so.6: version `CXXABI_1.3.9' not found (required by /home/japan/dealii/build/lib/libdeal_II.so.9.0.0-pre) ./step.release: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by /home/japan/dealii/build/lib/libdeal_II.so.9.0.0-pre) ./step.release: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by /home/japan/dealii/build/lib/libdeal_II.so.9.0.0-pre) ./step.release: /home/japan/anaconda3/lib/libstdc++.so.6: version `CXXABI_1.3.8' not found (required by /home/japan/dealii/build/lib/libdeal_II.so.9.0.0-pre) ./step.release: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by /usr/lib/x86_64-linux-gnu/libtbb.so.2) tests/quick_tests/CMakeFiles/step.release.run.dir/build.make:57: recipe for target 'tests/quick_tests/CMakeFiles/step.release.run' failed CMakeFiles/Makefile2:9917: recipe for target 'tests/quick_tests/CMakeFiles/step.release.run.dir/all' failed CMakeFiles/Makefile2:9924: recipe for target 'tests/quick_tests/CMakeFiles/step.release.run.dir/rule' failed Makefile:3386: recipe for target 'step.release.run' failed step.release: ****** RUN failed ******* =============================== OUTPUT END =============================== Expected stage PASSED - aborting CMake Error at /home/japan/dealii/cmake/scripts/run_test.cmake:140 (MESSAGE): *** abort Start 3: affinity.debug 3/6 Test #3: affinity.debug ...................***Failed 3.95 sec make[7]: *** [tests/quick_tests/CMakeFiles/affinity.debug.run] Error 1 make[6]: *** [tests/quick_tests/CMakeFiles/affinity.debug.run.dir/all] Error 2 make[5]: *** [tests/quick_tests/CMakeFiles/affinity.debug.run.dir/rule] Error 2 make[4]: *** [affinity.debug.run] Error 2 Test affinity.debug: RUN =============================== OUTPUT BEGIN =============================== [ 0%] Built target kill-affinity.debug-OK [ 0%] Built target obj_non_matching_inst [ 2%] Built target obj_non_matching_debug [ 11%] Built target obj_boost_serialization_debug [ 11%] Built target obj_boost_system_debug [ 13%] Built target obj_boost_iostreams_debug [ 15%] Built target obj_muparser_debug [ 15%] Built target expand_instantiations_exe [ 20%] Built target obj_numerics_inst [ 28%] Built target obj_numerics_debug [ 37%] Built target obj_fe_inst [ 48%] Built target obj_fe_debug [ 51%] Built target obj_dofs_inst [ 53%] Built target obj_dofs_debug [ 57%] Built target obj_lac_inst [ 66%] Built target obj_lac_debug [ 68%] Built target obj_base_inst [ 82%] Built target obj_base_debug [ 86%] Built target obj_grid_inst [ 88%] Built target obj_grid_debug [ 88%] Built target obj_hp_inst [ 91%] Built target obj_hp_debug [ 93%] Built target obj_multigrid_inst [ 95%] Built target obj_multigrid_debug [ 97%] Built target obj_distributed_inst [ 97%] Built target obj_distributed_debug [ 97%] Built target obj_algorithms_inst [ 97%] Built target obj_algorithms_debug [ 97%] Built target obj_matrix_free_inst [ 97%] Built target obj_matrix_free_debug [ 97%] Built target obj_meshworker_inst [ 97%] Built target obj_meshworker_debug [ 97%] Built target obj_opencascade_inst [100%] Built target obj_opencascade_debug [100%] Built target obj_physics_inst [100%] Built target obj_physics_debug [100%] Built target obj_physics_elasticity_inst [100%] Built target obj_physics_elasticity_debug [100%] Built target deal_II.g [100%] Built target affinity.debug affinity.debug: RUN failed. Output: ./affinity.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by ./affinity.debug) ./affinity.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `CXXABI_1.3.9' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./affinity.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./affinity.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./affinity.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `CXXABI_1.3.8' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./affinity.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by /usr/lib/x86_64-linux-gnu/libtbb.so.2) tests/quick_tests/CMakeFiles/affinity.debug.run.dir/build.make:57: recipe for target 'tests/quick_tests/CMakeFiles/affinity.debug.run' failed CMakeFiles/Makefile2:9949: recipe for target 'tests/quick_tests/CMakeFiles/affinity.debug.run.dir/all' failed CMakeFiles/Makefile2:9956: recipe for target 'tests/quick_tests/CMakeFiles/affinity.debug.run.dir/rule' failed Makefile:3399: recipe for target 'affinity.debug.run' failed affinity.debug: ****** RUN failed ******* =============================== OUTPUT END =============================== Expected stage PASSED - aborting CMake Error at /home/japan/dealii/cmake/scripts/run_test.cmake:140 (MESSAGE): *** abort Start 4: tbb.debug 4/6 Test #4: tbb.debug ........................***Failed 3.78 sec make[7]: *** [tests/quick_tests/CMakeFiles/tbb.debug.run] Error 1 make[6]: *** [tests/quick_tests/CMakeFiles/tbb.debug.run.dir/all] Error 2 make[5]: *** [tests/quick_tests/CMakeFiles/tbb.debug.run.dir/rule] Error 2 make[4]: *** [tbb.debug.run] Error 2 Test tbb.debug: RUN =============================== OUTPUT BEGIN =============================== [ 0%] Built target kill-tbb.debug-OK [ 0%] Built target obj_non_matching_inst [ 2%] Built target obj_non_matching_debug [ 11%] Built target obj_boost_serialization_debug [ 11%] Built target obj_boost_system_debug [ 13%] Built target obj_boost_iostreams_debug [ 15%] Built target obj_muparser_debug [ 15%] Built target expand_instantiations_exe [ 20%] Built target obj_numerics_inst [ 28%] Built target obj_numerics_debug [ 37%] Built target obj_fe_inst [ 48%] Built target obj_fe_debug [ 51%] Built target obj_dofs_inst [ 53%] Built target obj_dofs_debug [ 57%] Built target obj_lac_inst [ 66%] Built target obj_lac_debug [ 68%] Built target obj_base_inst [ 82%] Built target obj_base_debug [ 86%] Built target obj_grid_inst [ 88%] Built target obj_grid_debug [ 88%] Built target obj_hp_inst [ 91%] Built target obj_hp_debug [ 93%] Built target obj_multigrid_inst [ 95%] Built target obj_multigrid_debug [ 97%] Built target obj_distributed_inst [ 97%] Built target obj_distributed_debug [ 97%] Built target obj_algorithms_inst [ 97%] Built target obj_algorithms_debug [ 97%] Built target obj_matrix_free_inst [ 97%] Built target obj_matrix_free_debug [ 97%] Built target obj_meshworker_inst [ 97%] Built target obj_meshworker_debug [ 97%] Built target obj_opencascade_inst [100%] Built target obj_opencascade_debug [100%] Built target obj_physics_inst [100%] Built target obj_physics_debug [100%] Built target obj_physics_elasticity_inst [100%] Built target obj_physics_elasticity_debug [100%] Built target deal_II.g [100%] Built target tbb.debug tbb.debug: RUN failed. Output: ./tbb.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `CXXABI_1.3.9' not found (required by ./tbb.debug) ./tbb.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by ./tbb.debug) ./tbb.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `CXXABI_1.3.9' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./tbb.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./tbb.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./tbb.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `CXXABI_1.3.8' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./tbb.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by /usr/lib/x86_64-linux-gnu/libtbb.so.2) tests/quick_tests/CMakeFiles/tbb.debug.run.dir/build.make:57: recipe for target 'tests/quick_tests/CMakeFiles/tbb.debug.run' failed CMakeFiles/Makefile2:9788: recipe for target 'tests/quick_tests/CMakeFiles/tbb.debug.run.dir/all' failed CMakeFiles/Makefile2:9795: recipe for target 'tests/quick_tests/CMakeFiles/tbb.debug.run.dir/rule' failed Makefile:3334: recipe for target 'tbb.debug.run' failed tbb.debug: ****** RUN failed ******* =============================== OUTPUT END =============================== Expected stage PASSED - aborting CMake Error at /home/japan/dealii/cmake/scripts/run_test.cmake:140 (MESSAGE): *** abort Start 5: lapack.debug 5/6 Test #5: lapack.debug .....................***Failed 9.65 sec /home/japan/dealii/tests/quick_tests/lapack.cc: In function ‘int main()’: /home/japan/dealii/tests/quick_tests/lapack.cc:100:25: error: variable ‘std::ofstream logfile’ has initializer but incomplete type std::ofstream logfile(logname.c_str()); ^ make[7]: *** [tests/quick_tests/CMakeFiles/lapack.debug.dir/lapack.cc.o] Error 1 make[6]: *** [tests/quick_tests/CMakeFiles/lapack.debug.dir/all] Error 2 make[5]: *** [tests/quick_tests/CMakeFiles/lapack.debug.run.dir/rule] Error 2 make[4]: *** [lapack.debug.run] Error 2 Test lapack.debug: BUILD =============================== OUTPUT BEGIN =============================== lapack.debug: BUILD failed. Output: [ 0%] Built target kill-lapack.debug-OK [ 0%] Built target obj_non_matching_inst [ 2%] Built target obj_non_matching_debug [ 10%] Built target obj_boost_serialization_debug [ 10%] Built target obj_boost_system_debug [ 13%] Built target obj_boost_iostreams_debug [ 15%] Built target obj_muparser_debug [ 15%] Built target expand_instantiations_exe [ 19%] Built target obj_numerics_inst [ 28%] Built target obj_numerics_debug [ 36%] Built target obj_fe_inst [ 47%] Built target obj_fe_debug [ 50%] Built target obj_dofs_inst [ 52%] Built target obj_dofs_debug [ 56%] Built target obj_lac_inst [ 65%] Built target obj_lac_debug [ 67%] Built target obj_base_inst [ 80%] Built target obj_base_debug [ 84%] Built target obj_grid_inst [ 86%] Built target obj_grid_debug [ 86%] Built target obj_hp_inst [ 89%] Built target obj_hp_debug [ 91%] Built target obj_multigrid_inst [ 93%] Built target obj_multigrid_debug [ 95%] Built target obj_distributed_inst [ 95%] Built target obj_distributed_debug [ 95%] Built target obj_algorithms_inst [ 95%] Built target obj_algorithms_debug [ 95%] Built target obj_matrix_free_inst [ 95%] Built target obj_matrix_free_debug [ 95%] Built target obj_meshworker_inst [ 95%] Built target obj_meshworker_debug [ 95%] Built target obj_opencascade_inst [ 97%] Built target obj_opencascade_debug [ 97%] Built target obj_physics_inst [ 97%] Built target obj_physics_debug [ 97%] Built target obj_physics_elasticity_inst [ 97%] Built target obj_physics_elasticity_debug [ 97%] Built target deal_II.g [100%] Building CXX object tests/quick_tests/CMakeFiles/lapack.debug.dir/lapack.cc.o tests/quick_tests/CMakeFiles/lapack.debug.dir/build.make:62: recipe for target 'tests/quick_tests/CMakeFiles/lapack.debug.dir/lapack.cc.o' failed CMakeFiles/Makefile2:10047: recipe for target 'tests/quick_tests/CMakeFiles/lapack.debug.dir/all' failed CMakeFiles/Makefile2:9827: recipe for target 'tests/quick_tests/CMakeFiles/lapack.debug.run.dir/rule' failed Makefile:3347: recipe for target 'lapack.debug.run' failed lapack.debug: ****** BUILD failed ******* =============================== OUTPUT END =============================== Expected stage PASSED - aborting CMake Error at /home/japan/dealii/cmake/scripts/run_test.cmake:140 (MESSAGE): *** abort Start 6: umfpack.debug 6/6 Test #6: umfpack.debug ....................***Failed 3.83 sec make[7]: *** [tests/quick_tests/CMakeFiles/umfpack.debug.run] Error 1 make[6]: *** [tests/quick_tests/CMakeFiles/umfpack.debug.run.dir/all] Error 2 make[5]: *** [tests/quick_tests/CMakeFiles/umfpack.debug.run.dir/rule] Error 2 make[4]: *** [umfpack.debug.run] Error 2 Test umfpack.debug: RUN =============================== OUTPUT BEGIN =============================== [ 0%] Built target kill-umfpack.debug-OK [ 0%] Built target obj_non_matching_inst [ 2%] Built target obj_non_matching_debug [ 10%] Built target obj_boost_serialization_debug [ 10%] Built target obj_boost_system_debug [ 13%] Built target obj_boost_iostreams_debug [ 15%] Built target obj_muparser_debug [ 15%] Built target expand_instantiations_exe [ 19%] Built target obj_numerics_inst [ 28%] Built target obj_numerics_debug [ 36%] Built target obj_fe_inst [ 47%] Built target obj_fe_debug [ 50%] Built target obj_dofs_inst [ 52%] Built target obj_dofs_debug [ 56%] Built target obj_lac_inst [ 65%] Built target obj_lac_debug [ 67%] Built target obj_base_inst [ 80%] Built target obj_base_debug [ 84%] Built target obj_grid_inst [ 86%] Built target obj_grid_debug [ 86%] Built target obj_hp_inst [ 89%] Built target obj_hp_debug [ 91%] Built target obj_multigrid_inst [ 93%] Built target obj_multigrid_debug [ 95%] Built target obj_distributed_inst [ 95%] Built target obj_distributed_debug [ 95%] Built target obj_algorithms_inst [ 95%] Built target obj_algorithms_debug [ 95%] Built target obj_matrix_free_inst [ 95%] Built target obj_matrix_free_debug [ 95%] Built target obj_meshworker_inst [ 95%] Built target obj_meshworker_debug [ 95%] Built target obj_opencascade_inst [ 97%] Built target obj_opencascade_debug [ 97%] Built target obj_physics_inst [ 97%] Built target obj_physics_debug [ 97%] Built target obj_physics_elasticity_inst [ 97%] Built target obj_physics_elasticity_debug [ 97%] Built target deal_II.g [100%] Built target umfpack.debug umfpack.debug: RUN failed. Output: ./umfpack.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `CXXABI_1.3.9' not found (required by ./umfpack.debug) ./umfpack.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by ./umfpack.debug) ./umfpack.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `CXXABI_1.3.9' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./umfpack.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./umfpack.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.20' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./umfpack.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `CXXABI_1.3.8' not found (required by /home/japan/dealii/build/lib/libdeal_II.g.so.9.0.0-pre) ./umfpack.debug: /home/japan/anaconda3/lib/libstdc++.so.6: version `GLIBCXX_3.4.21' not found (required by /usr/lib/x86_64-linux-gnu/libtbb.so.2) tests/quick_tests/CMakeFiles/umfpack.debug.run.dir/build.make:57: recipe for target 'tests/quick_tests/CMakeFiles/umfpack.debug.run' failed CMakeFiles/Makefile2:10144: recipe for target 'tests/quick_tests/CMakeFiles/umfpack.debug.run.dir/all' failed CMakeFiles/Makefile2:10151: recipe for target 'tests/quick_tests/CMakeFiles/umfpack.debug.run.dir/rule' failed Makefile:3477: recipe for target 'umfpack.debug.run' failed umfpack.debug: ****** RUN failed ******* =============================== OUTPUT END =============================== Expected stage PASSED - aborting CMake Error at /home/japan/dealii/cmake/scripts/run_test.cmake:140 (MESSAGE): *** abort 0% tests passed, 6 tests failed out of 6 Total Test time (real) = 32.38 sec The following tests FAILED: 1 - step.debug (Failed) 2 - step.release (Failed) 3 - affinity.debug (Failed) 4 - tbb.debug (Failed) 5 - lapack.debug (Failed) 6 - umfpack.debug (Failed) Errors while running CTest *************************************************************************** ** Error: Some of the quick tests failed. ** *************************************************************************** Please scroll up or check the file tests/quick_tests/quicktests.log for the error messages. If you are unable to fix the problems, see the FAQ or write to the mailing list linked at http://www.dealii.org The affinity test can fail when you are linking in a library like BLAS which uses OpenMP. Even without calling any BLAS functions, OpenMP messes with the thread affinity which causes TBB to run single-threaded only. You can fix this by exporting OMP_NUM_THREADS=1. Also see GOMP_CPU_AFFINITY and OMP_PROC_BIND. CMake Error at /home/japan/dealii/tests/quick_tests/run.cmake:68 (MESSAGE): tests/quick_tests/CMakeFiles/test.dir/build.make:57: recipe for target 'tests/quick_tests/CMakeFiles/test' failed make[3]: *** [tests/quick_tests/CMakeFiles/test] Error 1 CMakeFiles/Makefile2:10273: recipe for target 'tests/quick_tests/CMakeFiles/test.dir/all' failed make[2]: *** [tests/quick_tests/CMakeFiles/test.dir/all] Error 2 CMakeFiles/Makefile2:10280: recipe for target 'tests/quick_tests/CMakeFiles/test.dir/rule' failed make[1]: *** [tests/quick_tests/CMakeFiles/test.dir/rule] Error 2 Makefile:3529: recipe for target 'test' failed make: *** [test] Error 2 -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. To unsubscribe from this group and stop receiving emails from it, send an email to dealii+unsubscr...@googlegroups.com. For more options, visit https://groups.google.com/d/optout.