Your message dated Wed, 14 Feb 2018 08:50:00 +0000
with message-id <e1elslm-000b5h...@fasolo.debian.org>
and subject line Bug#890371: fixed in dialign-t 1.0.2-10
has caused the Debian Bug report #890371,
regarding dialign-t FTCBFS: passes -mmmx for !x86 builds
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
890371: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=890371
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: dialign-t
Version: 1.0.2-9
Tags: patch
User: helm...@debian.org
Usertags: rebootstrap
dialign-t fails to cross build from source, because it determines
compiler flags from the build architecture rather than the host
architecture. Thus cross building for e.g. mips can include -mmmx.
The attached patch goes a little further than s/BUILD/HOST/. It removes
the need to invoke the shell for each make invocation by relying on
dpkg's architecture.mk. It also enables -mmmx for more architectures
that may be relevant by matching on the cpu. It will enable these flags
on e.g.:
* x32
* kfreebsd-amd64
* hurd-i386
* musl-linux-i386
Please consider applying it.
Helmut
diff --minimal -Nru dialign-t-1.0.2/debian/changelog
dialign-t-1.0.2/debian/changelog
--- dialign-t-1.0.2/debian/changelog 2016-12-17 12:49:37.000000000 +0100
+++ dialign-t-1.0.2/debian/changelog 2018-02-14 07:52:36.000000000 +0100
@@ -1,3 +1,10 @@
+dialign-t (1.0.2-9.1) UNRELEASED; urgency=medium
+
+ * Non-maintainer upload.
+ * Fix FTCBFS: fix build/host confusion. (Closes: #-1)
+
+ -- Helmut Grohne <hel...@subdivi.de> Wed, 14 Feb 2018 07:52:36 +0100
+
dialign-t (1.0.2-9) unstable; urgency=medium
* Team upload.
diff --minimal -Nru dialign-t-1.0.2/debian/rules dialign-t-1.0.2/debian/rules
--- dialign-t-1.0.2/debian/rules 2016-12-17 11:36:41.000000000 +0100
+++ dialign-t-1.0.2/debian/rules 2018-02-14 07:52:36.000000000 +0100
@@ -2,7 +2,10 @@
SRCDIR=$(CURDIR)/source
-export SSEFLAGS := $(shell if [ `dpkg-architecture -qDEB_BUILD_ARCH` = amd64
-o `dpkg-architecture -qDEB_BUILD_ARCH` = i386 ] ; then echo "-mfpmath=sse
-msse -mmmx" ; fi)
+include /usr/share/dpkg/architecture.mk
+ifneq ($(filter $(DEB_HOST_ARCH_CPU),amd64 i386),)
+export SSEFLAGS = -mfpmath=sse -msse -mmmx
+endif
export DEB_BUILD_MAINT_OPTIONS += hardening=+all
%:
--- End Message ---
--- Begin Message ---
Source: dialign-t
Source-Version: 1.0.2-10
We believe that the bug you reported is fixed in the latest version of
dialign-t, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 890...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated dialign-t package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Wed, 14 Feb 2018 09:27:32 +0100
Source: dialign-t
Binary: dialign-tx dialign-tx-data
Architecture: source
Version: 1.0.2-10
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Description:
dialign-tx - Segment-based multiple sequence alignment
dialign-tx-data - Segment-based multiple sequence alignment (data files)
Closes: 890371
Changes:
dialign-t (1.0.2-10) unstable; urgency=medium
.
[ Helmut Grohne ]
* Fix FTCBFS: fix build/host confusion. (Closes: #890371)
.
[ Andreas Tille ]
* cme fix dpkg-control
* debhelper 11
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