Bug#1043686: Please provide a proper download location for beads

seems to fix the bug is located at https://salsa.debian.org/med-team/beads/-/tree/1.1.22-1?ref_type=tags To me it looks like it is the HEAD of the master branch. Could you confirm this is correct ? Sincerely, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Researcher at CNRS ⢿⡄⠘⠷⠚

Bug#1043686: Please provide a proper download location for beads

e anymore. But it might still be useful to the community. In the hope I have answered your question correctly :-) Most sincerely Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Researcher at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org boo

Bug#1056549: grantlee5: Is there intention to port the lib to Qt6 ?

On Thu, Nov 23, 2023 at 11:24:39AM +0100, Sune Stolborg Vuorela wrote: On Thursday, November 23, 2023 10:52:56 AM CET Filippo Rusconi wrote: include(KDEInstallDirs) include(KDEFrameworkCompilerSettings NO_POLICY_SCOPE) include(KDECMakeSettings) include(KDEGitCommitHooks) KDEInstallDirs

Bug#1056549: grantlee5: Is there intention to port the lib to Qt6 ?

Greetings, Sune Thank you for your response, On Thu, Nov 23, 2023 at 09:22:21AM +0100, Sune Stolborg Vuorela wrote: On Wednesday, November 22, 2023 3:49:57 PM CET Filippo Rusconi wrote: There appears to be an effort upstream to port Grantlee to Qt6. Is there any intention downstream

Bug#1056549: grantlee5: Is there intention to port the lib to Qt6 ?

=en_US.UTF-8 Shell: /bin/sh linked to /usr/bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Researcher at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org

Bug#1050899: qa.debian.org: https://qa.debian.org lists repository size not matching GitLab's data

of that ddpo page, nothing changes. What is it that I am misunderstanding on the whole repository size problematic ? Thank you for your kind attention and for your help, Sincerely Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Researcher at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msx

Bug#1024878: RM: msxpertsuite

/system) LSM: AppArmor: enabled -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org

Bug#1024780: msxpertsuite: FTBFS with new qcustomplot

, that was expected but I am planning to write to FTPMasters to remove that package since it is now fully superseded by the two massxpert/minexpert2 packages. I'll do that. Tank you for your *hardwork* on our distribution! Sincerely, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist

Bug#1023550: transition: qcustomplot

-- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org

Bug#1023550: transition: qcustomplot

and then the build of autopkgtest fails? I'd be happy to learn more about all this, but for the moment these inconsistencies make me dubitative... Sincerely, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org

Bug#1023550: transition: qcustomplot

Greetings Sebastian, On Sat, Nov 19, 2022 at 08:17:41PM +0100, Sebastian Ramacher wrote: Hi Filippo On 2022-11-11 10:56:08 +0100, Filippo Rusconi wrote: Greetings Sebastian, Thank your for your message. On Thu, Nov 10, 2022 at 11:04:54PM +0100, Sebastian Ramacher wrote: > Control: tags

Bug#1023550: transition: qcustomplot

Greetings, Sebastian, On Sat, Nov 19, 2022 at 08:17:41PM +0100, Sebastian Ramacher wrote: Hi Filippo On 2022-11-11 10:56:08 +0100, Filippo Rusconi wrote: Greetings Sebastian, Thank your for your message. On Thu, Nov 10, 2022 at 11:04:54PM +0100, Sebastian Ramacher wrote: > Control: tags

Bug#1024106: traceshark: QCustomPlot transition

) Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) (ignored: LC_ALL set to en_US.UTF-8), LANGUAGE=en_US.UTF-8 Shell: /bin/sh linked to /usr/bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS

Bug#1024105: nageru: QCustomPlot transition

: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) (ignored: LC_ALL set to en_US.UTF-8), LANGUAGE=en_US.UTF-8 Shell: /bin/sh linked to /usr/bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS

Bug#1024104: wsjtx: QCustomPlot transition

, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) (ignored: LC_ALL set to en_US.UTF-8), LANGUAGE=en_US.UTF-8 Shell: /bin/sh linked to /usr/bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer

Bug#1024103: wfview: QCustomPlot transition

=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) (ignored: LC_ALL set to en_US.UTF-8), LANGUAGE=en_US.UTF-8 Shell: /bin/sh linked to /usr/bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS

Bug#1024102: polyphone: QCustomPlot transition

; PREEMPT) Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) (ignored: LC_ALL set to en_US.UTF-8), LANGUAGE=en_US.UTF-8 Shell: /bin/sh linked to /usr/bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist

Bug#1024101: js8call: QCustomPlot transition

: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) (ignored: LC_ALL set to en_US.UTF-8), LANGUAGE=en_US.UTF-8 Shell: /bin/sh linked to /usr/bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS

Bug#1024100: libxtrx: QCustomPlot transition

threads; PREEMPT) Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) (ignored: LC_ALL set to en_US.UTF-8), LANGUAGE=en_US.UTF-8 Shell: /bin/sh linked to /usr/bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research

Bug#1023550: transition: qcustomplot

Greetings Sebastian, Thank your for your message. On Thu, Nov 10, 2022 at 11:04:54PM +0100, Sebastian Ramacher wrote: Control: tags -1 moreinfo Control: forwarded -1 https://release.debian.org/transitions/html/auto-qcustomplot.html Hi Filippo On 2022-11-06 15:29:32 +0100, Filippo Rusconi

Bug#1023550: transition: qcustomplot

bqcustomplot2.1"; is_bad = .depends ~ "libqcustomplot2.0"; Sincerely, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org signature.asc Description: PGP signature

Bug#1019507: ITP: libquazip1-qt6 -- Qt/C++ wrapper over minizip - Version 1 (Qt6)

Greetings, On Tue, Sep 13, 2022 at 07:51:26AM +0200, Andreas Tille wrote: Hi, Am Mon, Sep 12, 2022 at 08:08:40PM +0200 schrieb Filippo Rusconi: > Thank you for the offer, but the package was just sponsored yesterday by > Adam Borowski (kilobyte) and is in the NEW queue. If you're inte

Bug#1019507: ITP: libquazip1-qt6 -- Qt/C++ wrapper over minizip - Version 1 (Qt6)

Greetings, Ben, On Mon, Sep 12, 2022 at 05:48:15PM +, Ben Westover wrote: Hello Filippo, On 9/12/22 10:08 AM, Filippo Rusconi wrote:> We do depend on Quazip and I very muuch would like to see a package for Qt6. Tell me how I can help and were to find the packaging repos. I'd be ea

Bug#1019507: ITP: libquazip1-qt6 -- Qt/C++ wrapper over minizip - Version 1 (Qt6)

the packaging repos. I'd be eager to review/test the packaging. Sincerely, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org

Bug#1000955: libkf5globalaccel-bin: /usr/bin/kglobalaccel5 eats up huge amount of CPU after suspend

3 ii libxcb11.14-3 libkf5globalaccel-bin recommends no packages. libkf5globalaccel-bin suggests no packages. -- no debconf information -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org

Bug#990517: installation-reports: Installation report (problems)

Package: installation-reports Severity: normal See attached file. Thank you for your hard work on Debian ! Filippo Please make sure that any installation logs that you think would be useful are attached to this report. Please compress large files using

Bug#989418: unblock: libpappsomspp/0.8.25-2

-- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org

Bug#988139: khal fails to run with ModuleNotFoundError: No module named 'xdg.BaseDirectory' error

1 ii python3-tzlocal2.1-1 ii python3-urwid 2.1.2-1 ii python3-xdg0.27-2 Versions of packages khal recommends: ii python3-setproctitle 1.2.1-1+b1 Versions of packages khal suggests: pn khal-doc -- no debconf information -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org

Bug#986280: ITP: libfdeep -- Header-only library for using Keras models in C++

Package: wnpp Severity: wishlist Owner: Filippo Rusconi X-Debbugs-Cc: debian-de...@lists.debian.org, lopi...@debian.org * Package name: libfdeep Version : 0.15.2 Upstream Author : Tobias Hermann (https://github.com/Dobiasd) * URL : /https://github.com/Dobiasd

Bug#986239: ITP: fplus -- Helps developers writing concise and readable C++ code

Package: wnpp Severity: wishlist Owner: Filippo Rusconi X-Debbugs-Cc: debian-de...@lists.debian.org, lopi...@debian.org * Package name: fplus Version : 0.2.13 Upstream Author : Tobias Hermann (https://github.com/Dobiasd/FunctionalPlus) * URL : https://github.com

Bug#985964: ITP: librdata -- C/C++ library to manipulate GNU R data frames.

Package: wnpp Severity: wishlist Owner: Filippo Rusconi X-Debbugs-Cc: debian-de...@lists.debian.org * Package name: librdata Version : 0.1.0 Upstream Author : Evan Miller * URL : https://github.com/WizardMac/librdata * License : MIT/X Programming Lang: C, C

Bug#982567: openms build-depends on removed package

Greetings, Adrian, On Mon, Mar 01, 2021 at 02:32:03AM +0200, Adrian Bunk wrote: On Sat, Feb 20, 2021 at 05:03:45PM +0100, Filippo Rusconi wrote: Greetings, Andreas and Michael, I hope you are doing fine. On Fri, Feb 19, 2021 at 10:19:11PM +0100, Andreas Tille wrote: > Hi Fili

Bug#982567: openms build-depends on removed package

and explanations. I am no on vacation, which means I'll finally find some time to try understand the implications of that SeqAn upgrade. I'll keep you posted with my findings. Cheers, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer

Bug#963021: colorcode: optionnaly display number of remaining possible positions

of ColorCode. I hope he will consider favourably your suggestion. I am not in the condition to try coding this... with real life tasks having too large a footprint at the moment. I'll keep this bug informed about the answer of Dirk. Cheers, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD

Bug#961805: ITP: libcustompwiz -- Library to load mzML/mzXML files (dev files)

Package: wnpp Severity: wishlist Owner: Filippo Rusconi . * Package name: libcustompwiz Version : 3.0.0 Upstream Author : Filipo Rusconi and Proteowizard authors * URL : https://salsa.debian.org/debichem-team/custompwiz * License : GPL-3+ Programming Lang: C

Bug#961085: ITP: toppic -- Top-down proteoform identification and characterization

Source: toppic Section: science Priority: optional Maintainer: The Debichem Group Uploaders: Filippo Rusconi Build-Depends: debhelper-compat (= 12), dpkg-dev (>= 1.18.25), cmake (>= 3.12) Standards-Version: 4.5.0 Homepage: http://proteomics.informatics.iup

Bug#959637: Please provide pristine-tar for libodsstream - or at least way to get upstream source (Was: Bug#959637: beads: FTBFS: build-dependency not installable: libodsstream-qt5-dev)

a look at it. Ciao Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org

Bug#924843: Any chance for some target fix for msxpertsuite

by the release team about this. Which is fine. Cheers, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org

Bug#924843: msxpertsuite: FTBFS: MassSpectrum.cpp:50:10: fatal error: pwiz/data/msdata/MSDataFile.hpp: No such file or directory

org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures. -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿

Bug#802377: O: docbook5-xml -- standard XML documentation system for software and systems

Greetings, Daniel, I have asked for membership to the Debian XML SGML Team on salsa.d.o. I am interested in learning the packaging of DocBook and related stuff because I base the documentation of my own software on that tool chain. Sincerely, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD

Bug#923928: unblock: daps/3.0.0-3

), LANGUAGE=en_US:en (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org

Bug#923927: unblock: isospec/1.9.1-5

: AppArmor: enabled -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org

Bug#584472: fop: please support OpenType fonts

[java2-runtime-headless] 9.0.4+12-4 Versions of packages fop recommends: ii libsaxon-java 1:6.5.5-12 Versions of packages fop suggests: ii fop-doc 1:2.3-2 -- no debconf information -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http

Bug#773656: I would like to resume packaging DAPS

would like DAPS to be as soon as possible in Debian for my needs and potentially for others'. Cheers, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org

Bug#919624: ITP: daps -- DocBook-based authoring and publishing system

Package: wnpp Severity: wishlist Owner: Filippo Rusconi * Package name: daps Version : 3.0.0 Upstream Author : Frank Sundermeyer * URL : http://opensuse.github.io/daps * License : GPL-3.0 Programming Lang: Shell, Python Description: DocBook Authoring

Bug#916234: depending software build failure (arm64, armel, mips)

ends on: ii pkg-config 0.29-4+b1 libeigen3-dev recommends no packages. Versions of packages libeigen3-dev suggests: pn libeigen3-doc pn libmpfrc++-dev -- no debconf information -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpe

Bug#916218: ITP: isospec -- Isotopic fine structure calculator

Package: wnpp Severity: wishlist Owner: Filippo Rusconi * Package name: isospec Version : 1.9.0 Upstream Author : Micha Startek and Mateusz Lacki * URL : https://github.com/MatteoLacki/IsoSpec * License : (BSD-2-Clause) Programming Lang: (C++, Python and R

Bug#913969: RM: openms [armel armhf] -- ANAIS; The software cannot build on the armel+armhf platforms

Package: ftp.debian.org Severity: normal Please, see the #90 bug for an explanation. Thanks to Adrian Bunk for the bug report and the tip. Sincerely, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org

Bug#907388: test

done the test. thanks for your patience. On Mon, Aug 27, 2018 at 02:14:36PM +0200, Filippo Rusconi wrote: Package: msxpertsuite Version: 5.3.3-1 Severity: wishlist -BEGIN PGP SIGNED MESSAGE- Hash: SHA1 test - -- System Information: Debian Release: buster/sid APT prefers testing APT

Bug#907388: test

Package: msxpertsuite Version: 5.3.3-1 Severity: wishlist -BEGIN PGP SIGNED MESSAGE- Hash: SHA1 test - -- System Information: Debian Release: buster/sid APT prefers testing APT policy: (500, 'testing'), (500, 'stable'), (1, 'experimental') Architecture: amd64 (x86_64) Kernel: Linux

Bug#901535: cb2bib FTCBFS: does not pass cross flags to qmake

dh_auto_configure do it. That makes cb2bib cross buildable. Please consider applying the attached patch. Thanks for the patch. Could you please enlighten me on the presence of the lonely +override_dh_auto_install: patch line, please? Thank you, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD

Bug#896141: msxpertsuite: binary-all FTBFS

On Fri, Apr 20, 2018 at 12:01:43PM +0300, Adrian Bunk wrote: On Fri, Apr 20, 2018 at 10:21:36AM +0200, Filippo Rusconi wrote: ... Can you provide more insight into this copy error? As I tell you, that error does not happen on my unstable chroot, running dpkg-buildpackage -A exactly the same

Bug#896141: msxpertsuite: binary-all FTBFS

ild/massxpert/user-manual' And the build finishes successfully the package creation step. Cheers, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Scientist at CNRS ⢿⡄⠘⠷⠚⠋⠀ Debian Developer ⠈⠳⣄ http://msxpertsuite.org http://www.debian.org

Bug#889701: comet-ms: unsatisfiable build dependency

As a follow-up, I just got a mail from upstream as a response to my enquiry of today. Upstream is OK to fix the autorship/license problems soon, to I'm optimistic about the resolution of this bug. Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http

Bug#889701: comet-ms: unsatisfiable build dependency

rop these packages altogether, which is a real pity because they are good stuff. Cheers, Filippo -- ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD ⣾⠁⢠⠒⠀⣿⡁ Debian Developer ⢿⡄⠘⠷⠚⠋⠀ http://msxpertsuite.org ⠈⠳⣄ http://www.debian.org

Bug#883538: ITP: libmsnumpress -- numerical compression in mass spectrometry data

Package: wnpp Severity: wishlist Owner: Filippo Rusconi <lopi...@debian.org> * Package name: libmsnumpress Version : 1.0.0 Upstream Author : Johan Teleman et al <johan.tele...@immun.lth.se> * URL : https://github.com/ms-numpress/ms-numpress

Bug#864513: lutefisk FTCBFS: uses the build architecture compiler

ln -s $(BUILDDIR)/Makefile.linux $(BUILDDIR)/Makefile override_dh_auto_build: - - $(MAKE) all -C $(BUILDDIR) + dh_auto_build --builddirectory=$(BUILDDIR) -- all override_dh_clean: dh_clean -- -- Filippo Rusconi, PhD - public crypto key B053 304E 17D6 D419 DD9B 4651 41A

Bug#832137: When selection option index 0 (Burn ISO) from the ISO Menu, nothing happens. The other menus seem to work.

Package: bashburn Version: 3.0.1-2 Severity: important Greetings, The subject actually says it all. This bug makes bashburn unsuitable to burn ISO images. Sincerely Filippo -- System Information: Debian Release: stretch/sid APT prefers testing APT policy: (500,

Bug#804496: openms: GSL transition requires rebuild

he new dependency and that fails with an error due to an abi change. I have sent that error message to upstream. I am waiting for their response. Regards, Filippo -- Filippo Rusconi, PhD - public crypto key 7694CF42@ pgp.mit.edu Researcher at CNRS and Debian Developer <lopi...@debian.or

Bug#797999: Tested with unstable today : no change only a black screen => qt 5.5.1 does not fix the dual screen problem (on nvidia at least)

at 01:57:15PM +0100, Eric Valette wrote: A someone suggested that qt 5.5+ may solve the problem, I did a quick test today (5.5.1-6) -- eric -- -- Filippo Rusconi, PhD - public crypto key 7694CF42@ pgp.mit.edu Researcher at CNRS and Debian Developer

Bug#802517: Crashes each time a union boolean operation is tried

Package: freecad Version: 0.15.4671+dfsg1-1 Severity: important Greetings, whenever I try a union boolean operation, the program crashes with the following error: *** Abort *** an exception was raised, but no catch was found. ... The exception is:SIGSEGV 'segmentation violation'

Bug#768058: ITP: comet-ms -- Tandem mass spectrometry (MS/MS) search engine

Package: wnpp Severity: wishlist Owner: Filippo Rusconi lopi...@debian.org * Package name: comet-ms Version : 2014022 Upstream Author : Michael R. Hoopmann and colleagues * URL : http://sourceforge.net/projects/comet-ms/ * License : Apache Programming Lang: C

Bug#764519: ITP: hekate

Package: wnpp Owner: Filippo Rusconi lopi...@debian.org Severity: wishlist * Package name: hekate Version : 2014108~git Upstream Author : Andrew Holding andrew.hold...@cruk.cam.ac.uk * URL or Web page : https://github.com/MRC-LMB-MassSpec/Hekate * License : GPL-3

Bug#763747: ITP: libmstoolkit

Package: wnpp Owner: Filippo Rusconi lopi...@debian.org Severity: wishlist * Package name: libmstoolkit Version : 72.0.0-1 Upstream Author : michael.hoopm...@gmail.com * URL or Web page : https://code.google.com/p/mstoolkit/ * License : BSD-3-Clause Description

Bug#758949: mmass: Patch for wxWidgets3.0 compatibility

stand and be seated straight as a `i', so I can test the patch. If it works fine, I'll upload soon. Cheers, Filippo -- Filippo Rusconi, PhD - public crypto key 7694CF42@ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org

Bug#758116: Please be verbose whether you would like to get your Blend promoted by tasksel

think that Debian still has the reputation of being difficult to deal with at install time. Thanks, Andreas to bring this forward for us not at the DebConf or not immediately involved with the installer-related topics. Cheers, Filippo -- Filippo Rusconi, PhD - public crypto key 7694CF42

Bug#633876: closed by Filippo Rusconi lopi...@debian.org (Bug#633876: fixed in cb2bib 1.4.9-2)

Cheers, --Barak. Thanks for this mail, I could get the git repos' debian branch. I implemented the new version of d/rules and I uploaded a new version as I think it is indeed much cleaner. Thank you, Cheers, Filippo -- Filippo Rusconi

Bug#738137: libpwiz: FTBFS on mips*: virtual memory exhausted

. Sincerely, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject

Bug#740309: [Debichem-devel] Bug#740309: libpwiz FTBFS: configure: error: cannot compile a test that uses Boost thread

error exit status 2 E: Failed autobuilding of package Thanks for the report. Same problem here, I'm investigating this one. Cheers, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert

Bug#736760: Conflict between debian/upstream (DEP-12) debian/upstream/ (uscan)

of reverting the change in devscripts. +1 Happy hacking, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org -- To UNSUBSCRIBE, email to debian-bugs-dist-requ

Bug#738137: [Debichem-devel] Bug#738137: libpwiz: FTBFS on mips*: virtual memory exhausted

think that this might work? I mean, are the mips systems characterized by this string: mips-linux-gnu Same for mipsel-linux-gnu? Thank you for your help, Ciao Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org

Bug#737533: ITP: r-cran-rnetcdf -- GNU R package that provides an R Interface to NetCDF Datasets

please enhance the long description since not every reader knows about netcdf and it just helps people who don't if they realise tht this package is not for them without doing additional research. We'll do that. Cheers, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu

Bug#736536: ITP: libwildmagic -- libraries for mathematics, physics, numerical methods

Package: wnpp Severity: wishlist Owner: Filippo Rusconi lopi...@debian.org * Package name: libwildmagic Version : 5.11 Upstream Author : Dave Eberly debe...@geometrictools.com * URL : http://geometrictools.com/ * License : Boostv1.0 Programming Lang: C

Bug#731064: [Debichem-devel] Bug#731064: libpwiz: FTBFS on ia64 mips mipsel s390x

/boost_aux/boost/atomic + cd $(BUILD_DIR) autotools/configure --prefix=/usr \ VERBOSE=1 $(MAKE) \ VERBOSE=1 DESTDIR=$(INSTALL_DIR) $(MAKE) install -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org

Bug#722606: printing fails with Perl error

Package: muttprint Version: 0.73-4 Severity: important Greetings, this is an error that did not occur until very recently. When trying to print a message from the mutt MUA, the following message is shown in the console: This shouldn't happen at /usr/share/perl/5.18/Text/Wrap.pm line 84, STDIN

Bug#720995: Please, package new version of the seqan software project

keep you posted. Ciao Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org

Bug#714365: [Debichem-devel] Bug#714365: src:openms: FTBFS against glpk 4.51-1

-use.patch force-use-shared-object-libs-upon-linking.patch +glpk-4.49.patch ___ Debichem-devel mailing list debichem-de...@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debichem-devel -- -- Filippo Rusconi, PhD

Bug#720995: Please, package new version of the seqan software project

Package: seqan-dev Version: 1.4.1 Severity: wishlist Greetings, Fellow Debianists, only a friendly ping to remind you that a new 1.4.1 version of the Seqan software project is available since 11. July 2013. I would be glad to be able to use that new version to package the openMS software suite.

Bug#718569: mouse-selectability of objects is lost right after saving a project

Package: freecad Version: 0.13~20121120.git5082ae2-2~exp2 Severity: normal Tags: upstream Greetings, I have to admit I do not know if this is a bug or a feature but I systematically loose selectability of any item in my project upon saving a file. The only way I found to be able to select items

Bug#718515: deleting a distance object makes the program segfault (example file provided)

Package: freecad Version: 0.13~20121120.git5082ae2-2~exp2 Severity: important Greetings, This is a reproducible problem and a recurrent one: I create lots of distance object using the measure tool. I do not want, however, to have them stored in the file, and I thus erase them right after the

Bug#702466: 702...@bugs.debian.org: no follow-up...

be interesting to have that fix in the next stable. Any directions ? Cheers, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org -- To UNSUBSCRIBE, email

Bug#702573: libopenms1 - No stable ABI

-- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact

Bug#702606: [Debichem-devel] Bug#702606: openms: FTBFS due to truncated object files

and I have already added a .NOTPARALLEL statement in debian/rules. Cheers, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org -- To UNSUBSCRIBE, email

Bug#702466: tag biology::nuceleic-acids is erroneous and affects a number of packages

Package: debtags Version: 1.10.1 Severity: minor Tags: patch Greetings, I found that the biology tag has a subtag nuceleic-acids that should be spelled nucleic-acids. I am providing a patch according to the debtags man page example Produce a local tag patch and another patch created after

Bug#695553: [Debichem-devel] Bug#695553: tandem-mass: FTBFS: cannot stat `debian/tmp/bin/tandem': No such file or directory

debichem-de...@lists.alioth.debian.org Uploaders: Filippo Rusconi lopi...@debian.org Standards-Version: 3.9.3 Build-Depends: debhelper (= 7.0.50~), diff -Nru tandem-mass-20121001/debian/tandem-mass.install tandem-mass-20121001/debian/tandem-mass.install --- tandem-mass-20121001/debian/tandem

Bug#693998: ITP: linux-minidisc -- Free software for accessing NetMD and HiMD MiniDisc devices

of possible trademark violations. If you have a better idea, I'd be happy to hear it ;). minidisk-intercessor minidisk-accessor ??? Ciao Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert

Bug#693978: seemingly erroneous --color and --notify options in git-buildpackage manpage

Package: git-buildpackage Version: 0.6.0~git20120601 Severity: minor Tags: patch Greetings, git-buildpackage (testing) fails when called with '--notify=on' or '--color=on', while it does not fail when called with '--git-notify=on' or '--git-color=on'. '--color' and '--notify' are erroneously

Bug#693532: missing dependency

Package: notmuch Version: 0.13.2-1 Severity: important Greetings, notmuch should depend on libmail-box-perl, which is not installed along with notmuch. When apt-get installing that package, the software works as expected. Thanks -- System Information: Debian Release: wheezy/sid APT prefers

Bug#693044: ITP: proteowizard -- library to perform proteomics data analyses

Package: wnpp Severity: wishlist Owner: Filippo Rusconi lopi...@debian.org * Package name: proteowizard Version : 3.0.4098 Upstream Author : Spielberg Family Center for Applied Proteomics * URL : http://proteowizard.sourceforge.net/ * License : Apache License

Bug#645318: Text does not scroll correctly in the feed reader

not observed that failure anymore since a while... You can close the bug. Thank you. Cheers, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS and Debian Developer lopi...@debian.org Author of ``massXpert'' at http://www.massxpert.org

Bug#691129: ITP: openms -- package for LC/MS data management and analysis

Package: wnpp Severity: wishlist Owner: Filippo Rusconi lopi...@debian.org * Package name: openms Version : 1.9.0 Upstream Author : Oliver Kohlbacher oliver.kohlbac...@uni-tuebingen.de * URL : http://open-ms.sourceforge.net * License : (Artistic) Programming

Bug#690177: ITP: python-mzml -- mzML mass spectrometric data parsing

Package: wnpp Severity: wishlist Owner: Filippo Rusconi lopi...@debian.org * Package name: python-mzml Version : 0.7.4 Upstream Author : Christian Fufezan christ...@fufezan.net * URL : http://pymzml.github.com/ * License : LGPL Programming Lang: Python

Bug#667129: cb2bib: ftbfs with GCC-4.7

indeed, and to Matthias Klose d...@debian.org and Cyril Brulebois k...@debian.org for handling that bug (with a patch) that somehow escaped my radar. I am handling that bug right away. All the best, Filippo -- Filippo Rusconi, PhD - public crypto key C78F687C @ pgp.mit.edu Researcher at CNRS

Bug#645318: Text does not scroll correctly in the feed reader

Package: akregator Version: 4:4.4.11.1+l10n-1 Severity: important Greetings, the text that is displayed for any given feed sometimes fails to scroll correctly. Oddly, indeed, when scrolling with mouse wheel, with PgUp/PgDown or with the scrollbar, only two or three lines at the top of the reader

Bug#645338: Print rendering output is different from input

2.7.2-8 pn python-lxml 2.3-0.1+b2 pn python-numpy 1:1.5.1-2+b1 pn python-uniconvertor none pn ruby 4.8 pn ruby1.8 [ruby] 1.8.7.352-2 pn skencil none -- no debconf information -- -- Filippo Rusconi

Bug#632934: texlive-latex-extra: The achemso class (American Chemical Society) is outdated.

Package: texlive-latex-extra Version: 2009-10 Severity: wishlist Greetings, the achemso package (upstream http://pubs.acs.org/paragonplus/submission/general/achemso.tds.zip) is outdated. Present version in testing : [2009/09/01 v3.3a Submission to ACS journals] Present version at ACS :

Bug#624371: ITP: ADIOS -- ADIOS Adaptable IO subsystem for science

. That is, by providing *what* ? Best regards, Filippo -- Filippo Rusconi, PhD - CNRS - public key C78F687C Author of ``massXpert'' at http://www.massxpert.org signature.asc Description: Digital signature

Bug#622972: ITP: qonjugator -- Qonjugator conjugates verbs in different languages

Package: wnpp Severity: wishlist Owner: Filippo Rusconi rusconi-deb...@laposte.net * Package name: qonjugator Version : 0.17 Upstream Author : Glad Deschrijver glad.deschrij...@gmail.com * URL : http://qt-apps.org/content/show.php/Qonjugator?content=112575 * License

Bug#614373: wget: mixes dpatch and 3.0 (quilt) | wget: diff for NMU version 1.12-2.2

to agree, I am eager to prepare a new patch in order to fix the mishap in one go. I would not be able to upload the package but could provide you with the files in some way. Best regards, Filippo -- Filippo Rusconi, PhD - CNRS - public key C78F687C Author of ``massXpert'' at http

Bug#614373: wget: diff for NMU version 1.12-2.2

tags 614373 + patch tags 614373 + pending thanks Dear maintainer, I've prepared an NMU for wget (versioned as 1.12-2.2) and uploaded it to DELAYED/7. Please feel free to tell me if I should delay it longer. Best regards. Filippo Rusconi -- Filippo Rusconi, PhD - CNRS - public key C78F687C

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