Bug#457361: 'import site' failed; use -v for traceback

2007-12-21 Thread Ondrej Certik
Package: python2.4-minimal Version: 2.4.4-6 Severity: minor --- Please enter the report below this line. --- When installing python, in cowbuilder (and a normal system), I can see: Setting up python2.4-minimal (2.4.4-6) ... 'import site' failed; use -v for traceback Setting up python2.4

Bug#448530: bug reproduced

2007-12-20 Thread Ondrej Certik
I have forwarded this bug upstream: http://projects.scipy.org/pipermail/numpy-discussion/2007-December/030320.html Do you think you could take part in the discussion in there to help trace this bug down? Hi Jan, upstream is willing to help with fixing this bug, but unfortunately, I don't

Bug#448530: bug reproduced

2007-12-20 Thread Ondrej Certik
On Dec 20, 2007 5:36 PM, Ondrej Certik [EMAIL PROTECTED] wrote: I have forwarded this bug upstream: http://projects.scipy.org/pipermail/numpy-discussion/2007-December/030320.html Do you think you could take part in the discussion in there to help trace this bug down? Hi Jan

Bug#456869: [PATCH] petsc4py: FTBFS: /usr/lib/petsc/include/petsc.h:138:17: error: mpi.h: No such file or directory

2007-12-20 Thread Ondrej Certik
Hi Manuel, Hello Ondrej, attached you'll find a patch that solved the FTBFS of your package for me. It patches the source directly, so you have to convert it so it can be used with your favorite patch system. The problem is that you can't find the MPI includes, as you already stated in

Bug#457088: [Pkg-openmpi-maintainers] Bug#457088: Bug#457088: Bug#457088: mpi.h is missing

2007-12-20 Thread Ondrej Certik
Hi Manuel, thanks for sorting this out. No. We never stated that mpi.h is symlinked in /usr/include. I said in my previous mail that mpi.h can be found in the /usr/include/mpi directory which is a symlink to /usr/lib/openmpi/include/. This is like all MPI packages do it. To the best of my

Bug#448530: bug reproduced

2007-12-20 Thread Ondrej Certik
Upstream also noticed a very similar, if not the same, bug: http://projects.scipy.org/scipy/numpy/ticket/551 Ondrej -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]

Bug#453690: dch -t -D unstable modifies the entry again

2007-12-20 Thread Ondrej Certik
On Dec 20, 2007 10:24 PM, Adam D. Barratt [EMAIL PROTECTED] wrote: retitle 453690 debchange doesn't work correctly with the changelog release heuristic thanks Hi, On Fri, 2007-11-30 at 17:17 +0100, Ondrej Certik wrote: dch -t -D unstable dch -t -D UNRELEASED to switch just

Bug#457060: move include files to /usr/include

2007-12-19 Thread Ondrej Certik
Package: python-numpy Version: 1:1.0.4-3 Severity: normal --- Please enter the report below this line. --- the files like arrayobject.h, arrayscalars.h etc. used to be in: /usr/lib/python2.4/site-packages/numpy/core/include/numpy/ now they are in

Bug#457088: mpi.h is missing

2007-12-19 Thread Ondrej Certik
Package: libopenmpi-dev Version: 1.2.4-5 Severity: serious --- Please enter the report below this line. --- Hi, the mpi.h is missing. I found it in /usr/lib/openmpi/include/ please add at least a symlink or something to /usr/include the is breaks the python-petsc4py package for example:

Bug#455886: fixed

2007-12-19 Thread Ondrej Certik
Package: openmpi --- Please enter the report below this line. --- This problem seems to be fixed: http://buildd.debian.org/pkg.cgi?pkg=libmesh Feel free to close the bug report. However, a different problem seems to have arised: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=457088 Again,

Bug#457088: [Pkg-openmpi-maintainers] Bug#457088: mpi.h is missing

2007-12-19 Thread Ondrej Certik
On Dec 19, 2007 7:15 PM, Dirk Eddelbuettel [EMAIL PROTECTED] wrote: On Wed, Dec 19, 2007 at 06:49:15PM +0100, Ondrej Certik wrote: Package: libopenmpi-dev Version: 1.2.4-5 Severity: serious --- Please enter the report below this line. --- Hi, the mpi.h is missing. I found

Bug#457088: [Pkg-openmpi-maintainers] Bug#457088: mpi.h is missing

2007-12-19 Thread Ondrej Certik
| I meant something like /usr/include/openmpi/ You lost me. Please make up your mind as to whether you think it is a problem because we do or do not use /usr/include, or /usr/include/openmpi ? We use /usr/include/openmpi now, and we think that's the right way: I agree that is the right way,

Bug#457088: [Pkg-openmpi-maintainers] Bug#457088: Bug#457088: Bug#457088: mpi.h is missing

2007-12-19 Thread Ondrej Certik
On Dec 20, 2007 12:29 AM, Manuel Prinz [EMAIL PROTECTED] wrote: Dear Sune! Am Mittwoch, den 19.12.2007, 23:43 +0100 schrieb Sune Vuorela: I have read the discussion in the bug report. If it is anywhere else, please point to it instead of playing smart-ass. That applies to everyone: I

Bug#457088: [Pkg-openmpi-maintainers] Bug#457088: Bug#457088: Bug#457088: mpi.h is missing

2007-12-19 Thread Ondrej Certik
On Dec 20, 2007 8:00 AM, Ondrej Certik [EMAIL PROTECTED] wrote: On Dec 20, 2007 12:29 AM, Manuel Prinz [EMAIL PROTECTED] wrote: Dear Sune! Am Mittwoch, den 19.12.2007, 23:43 +0100 schrieb Sune Vuorela: I have read the discussion in the bug report. If it is anywhere else, please

Bug#457088: [Pkg-openmpi-maintainers] Bug#457088: Bug#457088: Bug#457088: mpi.h is missing

2007-12-19 Thread Ondrej Certik
On Dec 20, 2007 8:12 AM, Ondrej Certik [EMAIL PROTECTED] wrote: On Dec 20, 2007 8:00 AM, Ondrej Certik [EMAIL PROTECTED] wrote: On Dec 20, 2007 12:29 AM, Manuel Prinz [EMAIL PROTECTED] wrote: Dear Sune! Am Mittwoch, den 19.12.2007, 23:43 +0100 schrieb Sune Vuorela: I have read

Bug#456887: please add TAB completion for pdf.gz and ps.gz files

2007-12-18 Thread Ondrej Certik
Package: evince Version: 2.20.2-1 Severity: wishlist --- Please enter the report below this line. --- Hi, currently, the TAB completion works fine, if the filename ends with ps or pdf, but it fails when it ends with ps.gz or pdf.gz (evince can display those files just fine). Otherwise,

Bug#456892: FTBFS

2007-12-18 Thread Ondrej Certik
Package: python-scipy Version: 0.6.0-5 Severity: normal --- Please enter the report below this line. --- When trying to build the source package from unstable, I get: [...] swig: scipy/linsolve/umfpack/umfpack.i swig -python -o build/src.linux-i686-2.4/scipy/linsolve/umfpack/_umfpack_wrap.c

Bug#454484: closed by Ondrej Certik [EMAIL PROTECTED] (seems to work, closing)

2007-12-17 Thread Ondrej Certik
On Dec 15, 2007 12:47 AM, Erich Schubert [EMAIL PROTECTED] wrote: Hi, Your mails never reached me. Did you send them to the BTS only maybe? Yes, only to BTS, I thought they will be automatically forwarded to you. Sorry about that. As you can see from the original bug report, I didn't have

Bug#452268: all fonts are unreadable

2007-12-17 Thread Ondrej Certik
On Nov 21, 2007 4:19 PM, Julien Cristau [EMAIL PROTECTED] wrote: reassign 452268 xserver-xorg-video-intel 2:2.2.0-1 forcemerge 439210 452268 kthxbye On Wed, Nov 21, 2007 at 15:19:45 +0100, Ondrej Certik wrote: I use unstable and in some recent upgrade (I think yesterday, or the day

Bug#456721: libpetsc.so depends on unexistent libraries

2007-12-17 Thread Ondrej Certik
Package: libpetsc2.3.3 Version: 2.3.3-3 Severity: normal --- Please enter the report below this line. --- Hi Adam, libmesh FTBFS with these errors (on buildbots, pbuilder and my system): configure:1632: mpicxx

Bug#448530: bug reproduced

2007-12-17 Thread Ondrej Certik
Hi Jan, indeed I also get the segfault now: $ LD_PRELOAD=/usr/lib/atlas/sse2/libblas.so.3 python test.py About to multiply Segmentation fault $ LD_PRELOAD=/usr/lib/atlas/sse/libblas.so.3 python test.py About to multiply Multiplied I have forwarded this bug upstream:

Bug#456730: FTBFS

2007-12-17 Thread Ondrej Certik
Package: petsc Severity: serious --- Please enter the report below this line. --- Hi Adam, latest petsc from unstable FTBFS in pbuilder for me: [...] TESTING: checkCCompiler from config.setCompilers(/tmp/buildd/petsc-2.3.3/python/BuildSystem/config/setCompilers.py:380)

Bug#456721: libpetsc.so depends on unexistent libraries

2007-12-17 Thread Ondrej Certik
On Dec 17, 2007 7:41 PM, Adam C Powell IV [EMAIL PROTECTED] wrote: reassign 456721 libopenmpi1 severity 456721 grave thanks Moving libmpi_*.so.0 to /usr/lib/openmpi/lib/ with no symlinks from /usr/lib *breaks every package which links with those libraries*. The soname ends in .so.0, so the

Bug#448530: more info

2007-12-14 Thread Ondrej Certik
Hi Jan, could you please send us more information about this bug? We would like to reproduce it and fix it. See my previous email about that, or browse it online here: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=448530 Thanks a lot, Ondrej -- To UNSUBSCRIBE, email to [EMAIL PROTECTED]

Bug#455890: pychess fails to start

2007-12-13 Thread Ondrej Certik
I can't reproduce this bug. Pychess loads without any problems on my system. I tried installing pychess on a new system (which didn't have pychess till then) and there also it loaded properly. Has this got something to do with your local settings? Can you please try to reproduce this on some

Bug#455890: pychess fails to start

2007-12-13 Thread Ondrej Certik
Let me first close the bug :-) I disagree with closing the bug, see below. Please remove PYTHONPATH from environ or set it to /usr/lib/python2.4/site-packages/ See this (from the source code): if PYTHONPATH in os.environ: path = os.path.abspath(os.environ[PYTHONPATH])

Bug#455890: pychess fails to start

2007-12-13 Thread Ondrej Certik
So the user may just add some or no directories to PYTHONPATH and the default path is still appended. Of course, all other python programs work, only pychess doesn't, because it screwes up the paths. Yes, I agree with you. I shall forward this report upstream and discuss with them.

Bug#455886: mpicc seems missing on buildbots

2007-12-12 Thread Ondrej Certik
Package: openmpi Severity: normal --- Please enter the report below this line. --- Hi, libmesh depends on openmpi, it build in pbuilder, however it fails on buildbots: http://buildd.debian.org/fetch.cgi?pkg=libmesh;ver=0.6.1.dfsg-1;arch=amd64;stamp=1197413726 I suspect the problem is with

Bug#455890: pychess fails to start

2007-12-12 Thread Ondrej Certik
Package: pychess Version: 0.8~beta2-2 Severity: normal --- Please enter the report below this line. --- $ pychess Traceback (most recent call last): File /usr/games/pychess, line 37, in ? import pychess.Main File /usr/lib/python2.4/site-packages/pychess/Main.py, line 14, in ? from

Bug#455886: Fwd: [Pkg-openmpi-maintainers] Bug#455886: mpicc seems missing on buildbots

2007-12-12 Thread Ondrej Certik
As far as I can tell, the compilers should work fine as long if you have the libopenmpi-dev package installed. Though, we're experiencing some problems with multiple MPI implementations installed, see #452047 and #451993. It sounds like it affects you as well but I'm not quite sure from your

Bug#455886: [Pkg-openmpi-maintainers] Bug#455886: Fwd: Bug#455886: mpicc seems missing on buildbots

2007-12-12 Thread Ondrej Certik
On Dec 12, 2007 2:28 PM, Sylvestre Ledru [EMAIL PROTECTED] wrote: I think this problem occurs because g++ is not installed for this package (g++ seems to be mandatory). However, openmi is providing an cxx alternative even when C++ compiler is not installed. Is it the right way ?

Bug#455886: Fwd: [Pkg-openmpi-maintainers] Bug#455886: Fwd: Bug#455886: mpicc seems missing on buildbots

2007-12-12 Thread Ondrej Certik
I always forgot to forward to the list, instead of the author... Dirk, what's the best way to deal with that? Blocking the bugs? Reassigning them to dpkg? Raising the dpkg bugs to serious? I'm not sure what is the correct procedure here. But as this affects every package that wants a) move to

Bug#455670: [Pkg-scicomp-devel] Bug#455670: FTBFS with GCC 4.3: missing #includes

2007-12-11 Thread Ondrej Certik
Your package fails to build with GCC 4.3. Version 4.3 has not been released yet but I'm building with a snapshot in order to find errors and give people an advance warning. In GCC 4.3, the C++ header dependencies have been cleaned up. The advantage of this is that programs will compile

Bug#450500: [Pkg-scicomp-devel] Bug#450500: Bug#450500: Bug#450500: libmesh: New upstream

2007-12-09 Thread Ondrej Certik
The libmesh in new is 0.6.1. But we need to wait until it propagates to unstable and test it. The current libmesh in unstable is not working correctly with petsc and openmpi. When the 0.6.1 is in unstable and working, we'll package the 0.6.2 and upload it to NEW. So expect 0.6.1 to be in unstable

Bug#455292: work in progress

2007-12-09 Thread Ondrej Certik
This is a huge task. But a work on this has started already, please follow all development here: http://wiki.sagemath.org/DebianSAGE Ondrej -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]

Bug#454484: please check again

2007-12-08 Thread Ondrej Certik
Hi, the new packages are in the archive, please try it again. I am not able to reproduce it. I purged all atlas packages and did: $ wajig install python-scipy Reading package lists... Done Building dependency tree Reading state information... Done The following packages were

Bug#416677: fixed?

2007-12-08 Thread Ondrej Certik
This bug seems to went away in the current unstable: [EMAIL PROTECTED]:/tmp$ cat crash.py from numpy import array sel = array([False,True]) p1 = array([11.]) p1[sel] = p1 [EMAIL PROTECTED]:/tmp$ python crash.py [EMAIL PROTECTED]:/tmp$ Could you please confirm it? We'll then close the bug in a

Bug#448530: unable to reproduce

2007-12-08 Thread Ondrej Certik
Hi, I am sorry it has taken so long to repond to this bugreport. We just moved the package to DPMT, so now we should be able to respond much more quickly. I am unable to run your script on the current unstable. Am I doing something wrong? $ python test.py Traceback (most recent call last):

Bug#454484: unable to reproduce

2007-12-06 Thread Ondrej Certik
Thanks very much for this bugreport. I just installed it on my system and it works: $ wajig install python-scipy Reading package lists... Done Building dependency tree Reading state information... Done Suggested packages: python-profiler The following NEW packages will be installed:

Bug#454429: python-numpy - FTBFS: Not fullfillable build-conflicts

2007-12-06 Thread Ondrej Certik
Thanks for the bug report. We are working on exactly this problem, and it seems we finally made a progress, python-numpy got built on many architectures now: http://buildd.debian.org/pkg.cgi?pkg=python-numpy Once python-numpy gets to unstable on most of the architectures, we'll fix the rest.

Bug#454158: closed by Sebastian Dröge [EMAIL PROTECTED] (Re: Bug#454158: Unhandled Exception on startup, tomboy won't start)

2007-12-04 Thread Ondrej Certik
I was using tomboy for managing my notes, but today I am not able to start it up. :( This was a bug in cli-common and is now fixed with 0.5.2. I upgraded all packages, including cli-common and the bug is still there. Could you please reopen the bug? $ dpkg -l cli-common

Bug#454289: Please add a command line option not to write .upload file

2007-12-04 Thread Ondrej Certik
Package: dput Version: 0.9.2.28 Severity: wishlist --- Please enter the report below this line. --- Hi, first, thanks for working on dput, it's a very nice program. One thing that I am missing is to use dput with pbuilder, i.e. use it to upload packages from a directory, to which it doesn't

Bug#454158: closed by Sebastian Dröge [EMAIL PROTECTED] (Re: Bug#454158: Unhandled Exception on startup, tomboy won't start)

2007-12-04 Thread Ondrej Certik
On Dec 4, 2007 2:20 PM, Sebastian Dröge [EMAIL PROTECTED] wrote: Am Dienstag, den 04.12.2007, 14:11 +0100 schrieb Ondrej Certik: I was using tomboy for managing my notes, but today I am not able to start it up. :( This was a bug in cli-common and is now fixed with 0.5.2. I

Bug#454158: closed by Sebastian Dröge [EMAIL PROTECTED] (Re: Bug#454158: Unhandled Exception on startup, tomboy won't start)

2007-12-04 Thread Ondrej Certik
On Dec 4, 2007 3:22 PM, Sebastian Dröge [EMAIL PROTECTED] wrote: Am Dienstag, den 04.12.2007, 15:16 +0100 schrieb Arthur Petitpierre: Selon Sebastian Dröge [EMAIL PROTECTED]: Try apt-get --reinstall install libmono-addins2.0-cil Sorry but it doesn't work : [15:[EMAIL

Bug#452991: fix

2007-12-03 Thread Ondrej Certik
The following patch fixes it: http://projects.scipy.org/scipy/scipy/changeset/3450 A new revision with this patch included will be uploaded soon. Ondrej -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]

Bug#454158: Unhandled Exception on startup, tomboy won't start

2007-12-03 Thread Ondrej Certik
Package: tomboy Version: 0.8.2-1 Severity: grave --- Please enter the report below this line. --- $ tomboy [DEBUG]: NoteManager created with note path /home/ondra/.tomboy. ** (Tomboy:30324): WARNING **: The following assembly referenced from /usr/lib/tomboy/Tomboy.exe could not be loaded:

Bug#426012: Depends on python-numpy-dev

2007-12-01 Thread Ondrej Certik
On Dec 1, 2007 7:11 PM, Kumar Appaiah [EMAIL PROTECTED] wrote: severity 426012 normal thanks On Wed, Aug 01, 2007 at 10:19:26PM +0200, Josselin Mouette wrote: Package: python-numpy Version: 1:1.0.3-1 Severity: normal Hi, currently python-numpy depends on python-numpy-dev. As the

Bug#452991: confirmed

2007-12-01 Thread Ondrej Certik
Hi Eike, sorry for a later reply, I somehow wasn't subscribed to the bug reports. Thanks very much for reporting it. Yes, I can reproduce the bug, it behaves the same on my computer. I reported the bug upstream: http://projects.scipy.org/pipermail/scipy-dev/2007-December/008017.html Feel free

Bug#453710: [patch] kill the build if the memory/disk is low

2007-11-30 Thread Ondrej Certik
Package: pbuilder Version: 0.176 Severity: wishlist Tags: patch --- Please enter the report below this line. --- Hi, we need a feature to kill the build if the free disk (or memory) space is running low. I am attaching a preliminary patch, that implements this feature, it applies cleanly

Bug#450443: FTBFS

2007-11-30 Thread Ondrej Certik
Package: python-numpy Version: 1:1.0.3-1 Thanks very much for the patch. I am going to try to fix it now as part of the Debian Python Modules Team. Ondrej -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]

Bug#453690: dch -t -D unstable modifies the entry again

2007-11-30 Thread Ondrej Certik
debian/changelog cython (0.9.6.8.ds-1~oc4) UNRELEASED; urgency=low [ Ondrej Certik ] * Initial Debian upload * Added a patch for handling the @classmethod decorators [ Sandro Tosi ] * debian/watch - added missing file TODO before a first upload: * cython man page (otherwise

Bug#452268: all fonts are unreadable

2007-11-21 Thread Ondrej Certik
Package: xserver-xorg Version: 1:7.2-5 Severity: serious --- Please enter the report below this line. --- I use unstable and in some recent upgrade (I think yesterday, or the day before that), all fonts became unreadable. When I start xterm in .xsession, the font is readable, but whenever I

Bug#451039: ITP: cython -- C-Extensions for Python

2007-11-13 Thread Ondrej Certik
Package name: cython Version: 0.9.6.8.ds Upstream Author: Stefan Behnel, Robert Bradshaw, and William Stein URL: http://www.cython.org/ License: Python Software Foundation License Description: C-Extensions for Python Cython is a language that makes

Bug#451039: ITP: cython -- C-Extensions for Python

2007-11-12 Thread Ondrej Certik
Package: wnpp Severity: wishlist X-Debbugs-CC: [EMAIL PROTECTED] --- Please fill out the fields below. --- Package name: cython Version: 0.9.6.8.ds Upstream Author: Stefan Behnel, Robert Bradshaw, and William Stein URL: http://www.cython.org/ License: Python

Bug#448158: more information

2007-11-08 Thread Ondrej Certik
OK, so petsc seems to be ok now. I am going to try libmesh. Please don't close this issue yet - there could be other problems with g77/gfortran and maybe the proposed fix is not really a fix (i.e. causes other problems). Need to check libmesh out first. I was able to compile libmesh, with the

Bug#448158: more information

2007-11-08 Thread Ondrej Certik
Okay, I will upload a new PETSc with this fix and the new watch file you sent me. Thanks! Nice. Check it in pbuilder first please - it's working for me, but it's better if it is tested twice. Great. I can't wait to try out the new libmesh with its new elements for 4th order Cahn-Hilliard

Bug#448158: more information

2007-11-07 Thread Ondrej Certik
I just tried building petsc in my unstable chroot, and it worked fine. Perhaps I have a package installed which is not in the Build-Depends? Here's the post-configure Fortran build info: Fortran Compiler version: - Using C/C++ linker: Using Fortran

Bug#450518: mpicc not found

2007-11-07 Thread Ondrej Certik
Package: libopenmpi-dev Version: 1.2.4-3 Severity: grave --- Please enter the report below this line. --- $ wajig install libopenmpi-dev Reading package lists... Done Building dependency tree Reading state information... Done The following packages were automatically installed and are no longer

Bug#448158: more information

2007-11-07 Thread Ondrej Certik
TESTING: checkCxxCompiler from config.setCompilers(/tmp/buildd/petsc-2.3.3/python/BuildSystem/config/setCompilers.py:541) TESTING: checkFortranCompiler from config.setCompilers(/tmp/buildd/petsc-2.3.3/python/BuildSystem/config/setCompilers.py:708)

Bug#450500: [Pkg-scicomp-devel] Bug#450500: libmesh: New upstream available

2007-11-07 Thread Ondrej Certik
There is a new upstream libmesh available, version 0.6.1. Please package it when you get a chance (and when we can resolve the PETSc build problems...) Thanks for the info. I tried to package the new version a week ago, but currently I am not able to get libmesh compile and link and make

Bug#450518: [Pkg-openmpi-maintainers] Bug#450518: mpicc not found

2007-11-07 Thread Ondrej Certik
Something is wrong with update-alternatives - probably screwed up by mpich, or lam packages. Any ideas? In clean state, this is what I get in pbuilder: # update-alternatives --list mpicc No alternatives for mpicc. # and outside: $ sudo update-alternatives --list mpicc $ Which means this

Bug#450518: [Pkg-openmpi-maintainers] Bug#450518: mpicc not found

2007-11-07 Thread Ondrej Certik
Hi Dirk and Manuel, Thanks for taking the time to report a bug. Thanks for a quick reply. | $ wajig install libopenmpi-dev At this point, did you have other MPI packages like LAM or MPICH installed? Nothing. I purged everything. I installed openmpi. I purged openmpi and checked again

Bug#450518: [Pkg-openmpi-maintainers] Bug#450518: mpicc not found

2007-11-07 Thread Ondrej Certik
On Nov 7, 2007 11:24 PM, Ondrej Certik [EMAIL PROTECTED] wrote: Something is wrong with update-alternatives - probably screwed up by mpich, or lam packages. Any ideas? In clean state, this is what I get in pbuilder: # update-alternatives --list mpicc No alternatives for mpicc

Bug#450518: [Pkg-openmpi-maintainers] Bug#450518: mpicc not found

2007-11-07 Thread Ondrej Certik
When I was switching between lam and ompi, something similar happened to me and I also had to resort to update-alternatives. IIRC I used --auto but I didn't write that down. Now, having gotten here, would you agree that is not a bug in the Open MPI packages but rather than some fragility in

Bug#448158: more information

2007-11-07 Thread Ondrej Certik
On Nov 7, 2007 9:52 PM, Ondrej Certik [EMAIL PROTECTED] wrote: TESTING: checkCxxCompiler from config.setCompilers(/tmp/buildd/petsc-2.3.3/python/BuildSystem/config/setCompilers.py:541) TESTING: checkFortranCompiler from config.setCompilers(/tmp/buildd/petsc-2.3.3/python/BuildSystem/config

Bug#448158: more information

2007-11-01 Thread Ondrej Certik
Package: petsc --- Please enter the report below this line. --- Hi Adam, I have some bad news - I am not able to build the package from source. How to reproduce: $ sudo apt-get update $ apt-get source petsc $ cd petsc-2.3.3 $ debuild [...] TESTING: SGIMPICheck from

Bug#448444: merge hg-buildpackage with git-buildpackage?

2007-10-28 Thread Ondrej Certik
Package: hg-buildpackage Version: 1.0.3 Severity: wishlist --- Please enter the report below this line. --- Hi, I want to use Mercurial for my packages and I have a couple of suggestions about the hg-buildpackage. I find it not very convenient to keep the bacula.upstream directory around. Why

Bug#447345: compiz doesn't seem to start

2007-10-21 Thread Ondrej Certik
On 10/21/07, Brice Goglin [EMAIL PROTECTED] wrote: Ondrej Certik wrote: Package: compiz Version: 0.5.2-2 Severity: normal --- Please enter the report below this line. --- I have Intel 945GM, running xserver-xorg-video-intel. I followed: http://wiki.debian.org/Compiz and some

Bug#447345: compiz doesn't seem to start

2007-10-20 Thread Ondrej Certik
Package: compiz Version: 0.5.2-2 Severity: normal --- Please enter the report below this line. --- I have Intel 945GM, running xserver-xorg-video-intel. I followed: http://wiki.debian.org/Compiz and some other howtos, when I do: $ LIBGL_ALWAYS_INDIRECT=TRUE compiz --replace

Bug#446108: oowriter crashes everytime

2007-10-17 Thread Ondrej Certik
Today I upgraded sid and it started to work... I was using oowriter from testing for last couple of days, today I did: $ wajig update Get:1 http://ftp.cz.debian.org sid Release.gpg [189B] Ign http://ftp.cz.debian.org sid/main Translation-en_US Get:2 http://ftp.cz.debian.org sid Release [79.6kB]

Bug#446108: oowriter crashes everytime

2007-10-15 Thread Ondrej Certik
I tried oowriter from testing (2.2.1-8) and that works fine. So there is a problem with oowriter in unstable on my machine. I'll be happy to provide any information that could lead to catch the bug. Ondrej -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble?

Bug#445771: python-scipy: indirectly build-depends on contrib package

2007-10-15 Thread Ondrej Certik
Thanks for the bugreport. It builds in cowbuilder on my computer just fine, but you are right nevertheless and a new revision will be uploaded soon, that will be using libsuitesparse-dev directly instead of libufsparse-dev. Ondrej -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject

Bug#322454: status

2007-10-15 Thread Ondrej Certik
Hi, what is the status of this bug? Does it still apply for the python-scipy 0.6.0 that is in sid now? Ondrej -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]

Bug#446108: oowriter crashes everytime

2007-10-11 Thread Ondrej Certik
Whenever I try to run oowriter, it crashes: since when? Unfortunately I don't remember when I used oowriter the last time, I think it's a month or less, definitely less than 2 months. (I update to the latest sid regularly, like every week or more often.) $ oowriter

Bug#446108: oowriter crashes everytime

2007-10-11 Thread Ondrej Certik
On 10/11/07, Cyril Brulebois [EMAIL PROTECTED] wrote: Ondrej Certik [EMAIL PROTECTED] (11/10/2007): So I don't think this is a broken mix, nor do I think any of them are related to this bug. BTW, do you know some more robust command to list all packages, that don't match the ones in sid

Bug#446108: oowriter crashes everytime

2007-10-10 Thread Ondrej Certik
Package: openoffice.org-writer Version: 2.2.1-9 Severity: serious --- Please enter the report below this line. --- Whenever I try to run oowriter, it crashes: $ oowriter /usr/lib/openoffice/program/soffice: line 360: 14843 Bus error $sd_prog/$sd_binary $@ ** (process:14826): WARNING **:

Bug#435102: confirmed here (/dev/rtc timeout)

2007-09-24 Thread Ondrej Certik
Well, I don't know. There are several possible scenarios. Maybe a misdesigned RTC chip (generally integrated in the chipset), or poor design of the motherboard. The interrupt is absent, or not routed to the processor, or used for something else, or... the kernel misdetected the chip, and

Bug#426012: unblocking 426012

2007-09-23 Thread Ondrej Certik
unblock 426012 by 435591 thankyou even though the bug 435591 is not fixed, the bug 426012 is fixed, so I am unblocking this. Ondrej -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]

Bug#435102: confirmed here (/dev/rtc timeout)

2007-09-20 Thread Ondrej Certik
So people using normal hardware and good kernels with proper RTC interrupts don't want to use --directisa. Setting it by default would work everywhere, but with degraded functionality for the majority. It would be a pity. Where is the real problem, that it doesn't work for me without the

Bug#435591: dependency

2007-09-19 Thread Ondrej Certik
This bug didn't render python-scipy uninstallable, there were other problems. At the moment, the Build-Depends for python-scipy are: python-numpy (= 1:1.0.2), and when this bug is fixed, we simply change that to python-numpy-dev as it should be. Ondrej -- To UNSUBSCRIBE, email to [EMAIL

Bug#442237: [Pkg-scicomp-devel] Bug#442237: file conflicts between packages

2007-09-14 Thread Ondrej Certik
Ah, thanks for noting this. I probably should clean up the mp packages anyway: it provides way too many binaries (all symlinks to the same file) and even still uses some gtk1 stuff. I'll try to get this fixed in the weekend. In the meantime, I just moved /usr/bin/newsp to

Bug#442265: Please uncomment the ls aliases

2007-09-14 Thread Ondrej Certik
Package: bash Version: 3.1dfsg-8 Severity: wishlist --- Please enter the report below this line. --- Currently, the /etc/skel/.bashrc contains: # some more ls aliases #alias ll='ls -l' #alias la='ls -A' #alias l='ls -CF' but I am always uncommenting them. I think they could be uncommented by

Bug#442267: [dch] allow to change distribution from command line

2007-09-14 Thread Ondrej Certik
) UNRELEASED; urgency=low * First unnofficial package revision -- Ondrej Certik [EMAIL PROTECTED] Fri, 07 Sep 2007 00:23:39 +0200 However, when testing the package, I need to temporarily change it to unstable in order to upload to my local repository (it's not a solution to change all

Bug#442267: [dch] allow to change distribution from command line

2007-09-14 Thread Ondrej Certik
and it adds a new line with * into the changelog. Could this behavior be changed? dch -r -D UNRELEASED :-) Awesome! I am sorry I missed that. :) This doesn't add a new entry but does exhibit a problem that your original command (dch -r ) also has - it adds a trailing space to the

Bug#442237: [Pkg-scicomp-devel] Bug#442237: Bug#442237: file conflicts between packages

2007-09-14 Thread Ondrej Certik
abinit now conflicts with mp the -2 version will be uploaded today. I'm not sure that is a good solution. The packages are totally unrelated and so there is no reason for them to conflict. The correct solution is to remove the conflicting file, which I will do tomorrow. In fact, as I

Bug#437842: I second this

2007-09-13 Thread Ondrej Certik
I am for it. Because I think such issues should be discussed in public. Ondrej -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of unsubscribe. Trouble? Contact [EMAIL PROTECTED]

Bug#435102: confirmed here (/dev/rtc timeout)

2007-09-11 Thread Ondrej Certik
Package: util-linux Version: 2.13-3 The same problem occurs here for fujitsu siemens Pi1505 and also for Intel Core Quad computer. $ sudo /etc/init.d/hwclock.sh restart Saving the system clock.. select() to /dev/rtc to wait for clock tick timed out And the clocks are simply wrong everytime I

Bug#441931: py.test -d fails but py.test works

2007-09-11 Thread Ondrej Certik
Package: python-codespeak-lib Version: 0.9.0-3.1 Severity: normal --- Please enter the report below this line. --- $ wget http://sympy.googlecode.com/files/sympy-0.5.3.tar.gz $ tar xzf sympy-0.5.3.tar.gz $ cd sympy-0.5.3 $ py.test [...] sympy/solvers/tests/test_solvers.py[5] .

Bug#441302: ITP: getxpath -- extract a value from a XML file using a XPATH expression

2007-09-08 Thread Ondrej Certik
same here, do we really need a package for a wrapper around xsltproc, where the GPL header is larger than the script itself? Why not to put that script inside the xsltproc package instead of creating a new one? Ondrej -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of

Bug#441043: qemubuilder fails on amd64 - kernel panic in qemu

2007-09-07 Thread Ondrej Certik
On 9/6/07, Junichi Uekawa [EMAIL PROTECTED] wrote: When running on amd64 architecture and emulating amd64 architecture: Looks like initrd is br0ken to me. Please give specific versions. on i386: $ sudo apt-get install linux-image-2.6.22-2-amd64 $ cat pbuilderrc-amd64.config

Bug#440944: fix

2007-09-06 Thread Ondrej Certik
On 9/6/07, Junichi Uekawa [EMAIL PROTECTED] wrote: So I am pretty sure I am using it in some unsupported way. I think there should be an example in the man page how to use it. Yes, I think there needs to be some example files to get people started. http://wiki.debian.org/qemubuilder is a

Bug#440944: qemu killed

2007-09-06 Thread Ondrej Certik
It happens all the time. Here is more information: $ cat .pbuilderrc KERNEL_IMAGE=/boot/vmlinuz-2.6.21-1-686 INITRD=/boot/initrd.img-2.6.21-1-686 ARCH=i386 BASEPATH=/tmp/base-i386.qemu MEMORY_MEGS=64 $ sudo qemubuilder --create [...] PCI: Ignore bogus resource 6 [0:0] of :00:02.0 NET:

Bug#441043: qemubuilder fails on amd64 - kernel panic in qemu

2007-09-06 Thread Ondrej Certik
Package: qemubuilder Version: 0.39 Severity: normal When running on amd64 architecture and emulating amd64 architecture: $ cat .pbuilderrc KERNEL_IMAGE=/boot/vmlinuz-2.6.22-2-amd64 INITRD=/boot/initrd.img-2.6.22-2-amd64 MIRRORSITE=http://ftp.cz.debian.org/debian ARCH=amd64

Bug#440944: qemu killed

2007-09-06 Thread Ondrej Certik
It happens all the time. Here is more information: - received termination signal with exit-code 0, killing child process (qemu) - killed (qemu) - child process terminated with status: f It is correct behavior, yes. Not a bug. I thought it's a bug. Sorry about that. I updated

Bug#440944: qemu killed

2007-09-06 Thread Ondrej Certik
It happens all the time. Here is more information: - received termination signal with exit-code 0, killing child process (qemu) - killed (qemu) - child process terminated with status: f It is correct behavior, yes. Not a bug. I thought it's a bug. Sorry about that. I

Bug#440944: qemu killed

2007-09-06 Thread Ondrej Certik
There is a bug after all here - the terminal get's screwed up after finishing the run: [EMAIL PROTECTED]:~/debian$ [EMAIL PROTECTED]:~/debian$ [EMAIL PROTECTED]:~/debian$ [EMAIL PROTECTED]:~/debian$ [EMAIL PROTECTED]:~/debian$ [EMAIL PROTECTED]:~/debian$ [EMAIL PROTECTED]:~/debian$

Bug#440944: sudo qemubuilder --create fails on debootstrap

2007-09-05 Thread Ondrej Certik
Package: qemubuilder Version: 0.39 Severity: normal --- Please enter the report below this line. --- Hi, thanks for this package, it looks very promising. I never tried it before, but I have pbuilder and cowbuilder working correctly. [EMAIL PROTECTED]:~$ sudo qemubuilder --create 1+0 records

Bug#440944: fix

2007-09-05 Thread Ondrej Certik
Go to parameter.c, line 225 and add the line pc.arch=i386; in there, like this: /* define pc to be clear. */ memset (pc, 0, sizeof(pbuilderconfig)); pc.arch=i386; /* default command-line component */ pbuildercommandline[0]=pbuilder; The problem is, that the pc-arch was empty, so

Bug#434666: how to make it compile

2007-08-21 Thread Ondrej Certik
Hi, to make the package compile again, please add lam4-dev to Build-Depends. The package then compiles fine in cowbuilder. I would suggest to upload the package with this simple fix as soon as possible, so that other packages depending on petsc can also be uploaded, and then investigate, why it

Bug#434666: still doesn't work on i386

2007-08-18 Thread Ondrej Certik
Package: petsc I just tried it in cowbuilder and it still doesn't work: [...] patching file src/sys/utils/makefile patching file src/sys/objects/makefile touch patch PETSC_DIR=/tmp/buildd/petsc-2.3.3 ./config/configure.py \ --with-debugging=1 \ --useThreads 0

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