Dear Emmanuele and Mathieu,
On 3/19/24 08:51, Mathieu Malaterre wrote:
On Tue, Mar 19, 2024 at 8:44 AM Emanuele Rocca wrote:
Hi,
On 2024-03-19 06:24, Sébastien Jodogne wrote:
Because of bug #1060104, a large majority of the packages related to
medical imaging have just disappeared from
Dear all,
Because of bug #1060104, a large majority of the packages related to
medical imaging have just disappeared from Debian Unstable.
But, if I correctly understand #1060104, it is specific to one single
platform (armel).
My question is: Rather than penalizing all platforms (including
Dear all,
Because of bug #1060104, a large majority of the packages related to
medical imaging have just disappeared from Debian Unstable.
But, if I correctly understand #1060104, it is specific to one single
platform (armel).
My question is: Rather than penalizing all platforms (including
Hello,
Even if I'm tagged as the maintainer of "orthanc-python", I don't know
how autopkgtest/flaky works (I haven't implemented such tests by
myself). I consequently forward your message to the Debian Med mailing
list, as I cannot help on this bug by myself.
Regards,
Sébastien-
> I looked at
error with latest upstream
> version[1]. I really hope Sebastian can clarify this.
>
> Kind regards
> Andreas.
>
>
> [1] https://salsa.debian.org/med-team/orthanc-dicomweb/-/jobs/4867398#L2591
>
> --
> http://fam-tille.de
--
Sébastien Jodogne
Web: https://www.info.ucl.ac.be/~sjodogne/
Twitter: https://twitter.com/sjodogne
Dear Étienne,
Thanks for your investigation! I confirm that you have found the proper
way of fixing this issue.
I have just committed an adapted patch in the upstream project, which
provides better compatibility with non-GNU/Linux environments:
and GNU Health... sorry for the delay, I got
feedback yesterday that required a rework for this application.
Cheers,
Sébastien-
--
Sébastien Jodogne
Mail: s.jodo...@orthanc-labs.com
Web: http://www.orthanc-labs.com/
Twitter: https://twitter.com/sjodogne
Dear Étienne and Nilesh,
On 24/11/22 17:25, Étienne Mollier wrote:
Control: tags -1 - patch
Hi Nilesh,
Nilesh Patra, on 2022-11-24:
On Fri, 18 Nov 2022 22:48:42 +0100 =?utf-8?Q?=C3=89tienne?= Mollier
wrote:
orthanc-dicomweb is currently affected by a failure to build
from source
Package: ftp.debian.org
Severity: normal
The explanation for this removal request is detailed in Bug#1015187:
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1015187
Dear Mathieu,
I confirm that this is an acceptable patch, except that it could be
applied only to "JsonCppConfiguration.cmake" (the
"DownloadOrthancFramework.cmake" is part of the skeleton that is copied
in each Orthanc official plugin).
It was on my plan to do this patch by myself, once I
This issue has been escalated on the Debian Med mailing list:
https://lists.debian.org/debian-med/2021/06/msg00014.html
This issue has been escalated on the Debian Med mailing list:
https://lists.debian.org/debian-med/2021/06/msg00014.html
This issue has been escalated on the Debian Med mailing list:
https://lists.debian.org/debian-med/2021/06/msg00014.html
Hello Mathieu,
This issue comes from the fact that many JavaScript packages have
recently changed their installation paths.
I guess that your issue can be fixed by reverting the following changeset:
> That log was using the experimental package and local config, right?
> It would be helpful if you could share how far you got using the package
> in unstable instead, and no custom config. I.e. using llvm-11.
No, this log was generated using only the packages from unstable, simply
by running
> Thanks for your bugreport - and for being the first known user of the
> emscripten package in Debian (besides my own use of it for the olm
> package).
This is really nice to see other work on WebAssembly in Debian! :-)
I think there will be other topics to be discussed, notably how to
properly
hem if someone else meets a similar problem in another context.
Best Regards,
Sébastien-
[1]
https://salsa.debian.org/med-team/civetweb/-/commit/ccb62139b6139ea6efc2432c12018de6e3c16003
On 3/11/20 14:11, Andreas Tille wrote:
> [including the list again]
> Hi Sébastien,
>
> On Mon, Nov 02, 2020
As suggested by Andreas, I've been in touch with the FTP team.
Following this discussion, I've uploaded orthanc-1.7.2+dfsg-3 to
unstable, that doesn't contain the NEW changes.
For reference, here are the two changesets to revert once
"liborthancframework-dev" and "liborthancframework1"
Dear all,
Because of the bug #966655 [1], and because of the fact that
orthanc-1.7.2+dfsg-2 is pending in the NEW queue [2], I cannot commit
the fix regarding the missing build dependency on tzdata until the NEW
packages get accepted.
But, as #966655 is tagged as serious, the entire Orthanc
Hello,
Thanks for your report. Unfortunately, as long as orthanc-1.7.2+dfsg-2
is pending in the NEW queue [1], no further patch can be applied.
Kind Regards,
Sébastien-
[1] https://ftp-master.debian.org/new.html
On 1/08/20 11:08, Gianfranco Costamagna wrote:
> Source: orthanc
> Version:
Dear Gilles,
I finally managed to find a few hours to finalize your patch. I had to
extend it a bit so for it to work correctly [1].
Version "1.2+dfsg-2" of the package has just been uploaded accordingly.
> It's not a problem doing the upload. this is the easy part :)
> What I'm uncomfortable
_CTYPE=fr_FR.UTF-8 (charmap=UTF-8),
> LANGUAGE=fr_FR.UTF-8 (charmap=UTF-8)
> Shell: /bin/sh linked to /bin/dash
> Init: systemd (via /run/systemd/system)
> LSM: AppArmor: enabled
>
>
>
> ___
> Debian-med-packaging mailing list
&
Thanks for your in-depth analysis!
As this problem is way too involved given my understanding of the Debian
package management process, I have followed the simple path you provided
by requesting the removal of the armel binaries of orthanc-dicomweb:
Package: ftp.debian.org
Severity: normal
The explanation for this removal request is detailed in Bug#959473:
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=959473
Sébastien-
On 8/04/20 10:34, Karsten Hilbert wrote:
> On Wed, Apr 08, 2020 at 07:50:06AM +0200, Sébastien Jodogne wrote:
>
>> Sorry for having overlooked this issue.
>>
>> I have migrated Karsten's instructions into the "README.Debian" file of
>> the "
arsten Hilbert wrote:
> On Mon, Apr 06, 2020 at 01:43:57PM -0700, tony mancill wrote:
>
>> On Fri, Dec 30, 2016 at 12:15:45PM +0100, Karsten Hilbert wrote:
>>> On Fri, Dec 30, 2016 at 10:57:56AM +0100, Sébastien Jodogne wrote:
>>>
>>>> Sorry,
Package: ftp.debian.org
Severity: normal
The "orthanc" package for s390x was removed, because of issue #954317:
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=954317
As this package depends on "orthanc", it must also be removed.
y "orthanc-python".
Regards,
Sébastien-
On 3/04/20 11:07, Andreas Tille wrote:
> Hi Sébastien,
>
> I'm extremely short in time but I stumbled upon this:
>
> On Fri, Apr 03, 2020 at 08:39:12AM +0200, Sébastien Jodogne wrote:
>> That being said, I have changed
Dear Alex,
Thanks so much for your careful review of the package!
According to your message, I have applied several fixes to it:
https://salsa.debian.org/med-team/orthanc-python/-/commits/master
if this is a python module then it should follow python guidelines.
The name in this case should
Package: ftp.debian.org
Severity: normal
The "orthanc" package for s390x was removed, because of issue #954317:
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=954317
As this package depends on "orthanc", it must also be removed.
Package: ftp.debian.org
Severity: normal
The "orthanc" package for s390x was removed, because of issue #954317:
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=954317
As this package depends on "orthanc", it must also be removed.
Package: ftp.debian.org
Severity: normal
The "orthanc" package for s390x was removed, because of issue #954317:
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=954317
As this package depends on "orthanc", it must also be removed.
Package: ftp.debian.org
Severity: normal
The "orthanc" package for s390x was removed, because of issue #954317:
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=954317
As this package depends on "orthanc", it must also be removed.
Package: ftp.debian.org
Severity: normal
One unit test fails on s390x architecture:
https://buildd.debian.org/status/fetch.php?pkg=orthanc=s390x=1.6.0%2Bdfsg-1=1584552281=0
[ RUN ] ParsedDicomFile.ToJsonFlags2
/<>/UnitTestsSources/FromDcmtkTests.cpp:732: Failure
Expected equality of these
Dear Ivo,
Please could you indicate where I can find information about how to
remove the old armel build?
some info is here:
https://wiki.debian.org/ftpmaster_Removals
Note that you can close this bug once the removal is done (otherwise
this bug would prevent migration to testing).
et/cgi-bin/mailman/listinfo/debian-med-packaging
--
Sébastien Jodogne
Mail: s.jodo...@orthanc-labs.com
Web: http://www.orthanc-labs.com/
Twitter: https://twitter.com/sjodogne
Be part of OrthancCon 2019! http://conference.orthanc-server.com/
__
> Debian-med-packaging mailing list
> debian-med-packag...@alioth-lists.debian.net
> https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-p
> ackaging
--
Sébastien Jodogne
Mail: s.jodo...@orthanc-labs.com
Web: http://www.orthanc-labs.com/
Twitter: https://twitter.com/sjodogne
Hello,
Thanks for the report! This is now fixed in the upstream mainline by
the two following changesets:
https://bitbucket.org/sjodogne/orthanc/commits/c8b75e207a82179a3f99a8bc
60b43626f8f3c34b
https://bitbucket.org/sjodogne/orthanc/commits/8849677c2cbcf0b5ac990e83
8c72ace6453b059b
Orthanc
Hello,
No: If the "--upgrade" command-line option is provided, the Orthanc server
will never start. If no upgrade is required, this is a void operation that
returns immediately.
I would have thought so. However, why does this script: [...]
producing the following log ? [...]
Dear Karsten,
Sorry for the delay.
may I ask for confirmation of the following behaviour:
If Orthanc is manually started for a DB upgrade
(say, on Debian:)
/usr/sbin/Orthanc --upgrade --trace /etc/orthanc/
BUT the database is already at the required version THEN
Orthanc
Dear Gert,
orthnac build depends on libdcmtk-dev, and this pulls in libssl1.0-dev
(since dcmtk (a) does not yet support openssl-1.1 and (b) it is used by
programs that require QT which conflicts with openssl-1.1).
libssl1.0-dev conflicts with libssl-dev, and hence the build failure.
The
Hello,
I have just updated the orthanc-postgresql package:
https://anonscm.debian.org/viewvc/debian-med?view=revision=22821
This new version of the package solves the severe FTBFS Bug#839309
(orthanc-postgresql: Could NOT find PostgreSQL).
In the absence of Andreas, please someone could
> - I would not have guessed that adding --upgrade might have made
> a difference to a failure that tells me "stack smashing detected"
> at the console :-)
Just to be sure: Is your issue an immediate crash with "stack smashing
detected", or is your issue a failure while executing the
Hello,
> On Sun, Mar 20, 2016 at 06:09:15PM +0100, Karsten Hilbert wrote:
> > >
> > > Have you added the "--upgrade" option so that Orthanc would automatically
> > > upgrade the database schema?
>
> I wonder whether this should be done in a postinst script.
>
> > Also, would Debian benefit
Hello,
I have spent a couple of hours trying to reproduce this issue, but I was unable
to do so. Here are the tests I made:
* Upgrade from Orthanc 0.9.4 + PosgreSQL plugins 1.3 (database schema v5), to
Orthanc mainline + PostgreSQL plugins 2.0 (database schema v6).
* Upgrade from Orthanc
Hello,
> > Is there anything else I can provide to get this bug looked at ?
>
> Even if I risk to be a pain in the behind - since this
> package is of such importance to responsible Medical Care
> I allow myself to re-inquire about the state of this bug.
Unfortunately, this item is low-priority
gt; LC_MONETARY = "fr_BE.UTF-8",
> LC_ADDRESS = "fr_BE.UTF-8",
> LC_TELEPHONE = "fr_BE.UTF-8",
> LC_NAME = "fr_BE.UTF-8",
> LC_MEASUREMENT = "fr_BE.UTF-8",
> LC_IDENTIFICATION = "fr_BE.UT
> > The problem is visibly that the macro "__linux" is not defined
> > anymore as it used to be, maybe because of an update of gcc.
>
> umh, isn't this the jurisdiction of glibc, rather than gcc? *shrugs*
You're of course right :)
> > Reading the new version of the "Pre-defined Compiler
Hello Andreas,
> > However, I have no access to a ppc/ppc64el computer, so I cannot check by
> > myself whether the patch actually solves this Debian bug. Could someone
> > help by testing the patch, or by giving me access to a test computer?
>
> The "lazy" solution is to upload your change and
Hello,
Thanks for reporting this issue. Here is the problematic excerpt in the code:
#if defined(_WIN32)
#include
#elif defined(__linux) || defined(__FreeBSD_kernel__) || defined(__APPLE__) ||
defined(__FreeBSD__)
#include
#else
#error Support your platform here
#endif
The problem is visibly
Hi Andreas,
> please double check my commits whether all files end up where they
> should be. The package builds nor also for arch all binary packages.
>
> I also fixed some other minor issues.
>
> Hope this helps and let me know if it should be sponsored as it is
> now.
I am extremely
Dear Andreas,
> > I am really sorry, but despite hours of work and readings, I am still
> > totally unable to reproduce (and thus fix) this bug by myself.
> > [...]
>
> Try
>
> pdebuild [pbuilder options] -- --debbuildopts -A
>
> This will produce the broken package.
Great! The option "-A"
Dear all,
> Right. I was just wondering why this was actually happening on the buildd,
> until I realised that it was a source-only upload of orthonc.
>
> Sebastien: you can see a log of the package build for arch=all on the
> package tracker, or directly on
>
>
Hello,
Thank for reporting this issue. However, I need help: I am indeed unable to
reproduce it...
According to your report, the file
"/usr/lib/orthanc/libModalityWorklists.so.1.0.0" lies both in package "orthanc"
and "orthanc-doc":
>
> Call Stack (most recent call first):
> > CMakeLists.txt:283 (include)
> >
> >
> > -- Configuring incomplete, errors occurred!
>
> --
> Martin Michlmayr
> Linux for HPE Helion, Hewlett Packard Enterprise
>
>
--
Sébastien Jodogne
Mail: s.jodo...@gmail.com
Web: http://www.sjodogne.be/
Twitter: https://twitter.com/sjodogne
Hello Karsten,
> Is there anything else I can provide to get this bug looked at ?
I am back from vacations. I will look at the upgrade problem as soon as
possible.
As a quick hack to unblock you, I would suggest to apply the "Generic
replication" procedure [1]. In your case, the procedure
Hello,
> 4) the existing orthanc_db is 0.8 and the jump is to Orthanc 1.0 (orthanc-pg
> 2.0)
Have you added the "--upgrade" option so that Orthanc would automatically
upgrade the database schema?
Sébastien-
Dear David,
Note however that, in the context of Orthanc, if the DICOM file is sent
>> through the REST API, then this decoding/re-encoding chain does not take
>> place (accordingly to your intuition). This would also be the case if
>> DICOMweb STOW-RS is used. [...]
>>
>
> Whether the data set
Orthanc will not modify the file by itself, except if the input file is
corrupted, which could lead to undefined behavior. Garbage in, garbage out.
Regards,
Sébastien-
On Sun, Jan 31, 2016 at 7:45 PM, Karsten Hilbert
wrote:
> On Sun, Jan 31, 2016 at 07:42:26PM +0100,
>
> > Orthanc will not modify the file by itself, except if the input file is
> > corrupted
>
> I hadn't been made aware of this "except" so far. This means
> more testing will need to be done because eventually Orthanc
> _does_ modify input files sometimes. Sigh.
>
Well, Orthanc does not modify
Dear Maria,
Thanks for your report! However, this issue is already fixed in the upstream
code since February 16th, 2015 [1].
Unfortunately, I am still waiting for sponsor to review/upload the latest
version of the Orthanc package [2]. I have therefore tagged your bug as closed
in the
Package: sponsorship-requests
Severity: wishlist
Dear mentors,
I am looking for a sponsor for my package orthanc:
* Package name: orthanc
Version : 0.2.1-3
Upstream Author : Sebastien Jodogne s.jodo...@gmail.com
* URL : https://code.google.com/p/orthanc/
*
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