Bug#1072115: ERROR:: Failure to read or parse /usr/share/coot/ui/coot-gtk4.ui

2024-05-28 Thread picca
I forgot to add that you start this script like this Test-Command: xvfb-run -s "-screen 0 1024x768x24 -ac +extension GLX +render -noreset" sh debian/tests/gui Depends: mesa-utils, coot, xauth, xvfb, Restrictions: allow-stderr

Bug#1072115: ERROR:: Failure to read or parse /usr/share/coot/ui/coot-gtk4.ui

2024-05-28 Thread Picca Frédéric-Emmanuel
Package: coot Version: 1.1.08+dfsg-2 Severity: important X-Debbugs-Cc: pi...@debian.org while trying to start coot, I get this error message. $ coot INFO:: built with GTK 4.12.5 pdd /usr/share/coot WARNING:: Coot REFMAC dictionary override COOT_REFMAC_LIB_DIR /usr/share/coot/lib failed to find

Bug#1039087: Info received (removing embeded version of yajl)

2024-05-28 Thread PICCA Frederic-Emmanuel
Here the diff between the epics version (debian patch unapplyed) and the current 2.1.0 version of yajl (debian patch unapplyed). not that simple...diff --git a/src/yajl.c b/src/yajl.c index d477893..fdad3f6 100644 --- a/src/yajl.c +++ b/src/yajl.c @@ -1,5 +1,5 @@ /* - * Copyright (c) 2007-2014,

Bug#1039087: removing embeded version of yajl

2024-05-28 Thread PICCA Frederic-Emmanuel
following a different path..., I added this in the rules file -export POSIX_CFLAGS+=$(CFLAGS) +export POSIX_CFLAGS+=$(CFLAGS) $(shell pkgconf --cflags yajl) export POSIX_CFLAGS+=$(CPPFLAGS) export POSIX_CPPFLAGS+=$(CPPFLAGS) -export POSIX_LDFLAGS+=$(LDFLAGS) +export POSIX_LDFLAGS+=$(LDFLAGS)

Bug#1063631: [Debian-pan-maintainers] Bug#1063631: closing 1063631

2024-04-17 Thread PICCA Frederic-Emmanuel
I am working on it at the upstream level need a few more days. Cheers Fred

Bug#1069144: ADvice about htis pocl issue on armel

2024-04-17 Thread PICCA Frederic-Emmanuel
Hello Andreas, I have another autopkgtest failure on armel with silx and pocl The content of check_atomic32 is def check_atomic32(device): try: ctx = pyopencl.Context(devices=[device]) except: return False, f"Unable to create context on {device}" else: queue

Bug#1069144: silx: [armel] autopkgtest opencl failure

2024-04-17 Thread Picca Frédéric-Emmanuel
Package: silx Version: 2.0.1+dfsg-1 Severity: normal X-Debbugs-Cc: pi...@debian.org Hello, the armel autopkgtest fail with this error message 1016s autopkgtest [22:49:50]: test opencl: [--- 1017s pocl warning: encountered incomplete implementation in

Bug#1060318: Could be related to LLVM rather than PoCL: works with LLVM-15

2024-03-12 Thread PICCA Frederic-Emmanuel
bravo !!! This is team works. :)) Cheers Frederic

Bug#1065724: epics-base: FTBFS on amd64: Tests failed

2024-03-12 Thread PICCA Frederic-Emmanuel
Here an analyse of the FTBFS On the amd64, I have two failures dureing the test Test Summary Report --- testPVAServer.t(Wstat: 0 Tests: 0 Failed: 0) Parse errors: No plan found in TAP output Files=6, Tests=129, 1 wallclock secs ( 0.05 usr 0.01 sys + 0.09 cusr 0.06 csys

Bug#1060318: Info received (Bug#1060318: Info received (Bug#1060318: Info received (Bug#1060318: Info received (silx: autopkgtest failure with Python 3.12))))

2024-03-11 Thread PICCA Frederic-Emmanuel
A workaround for now is to use this POCL_WORK_GROUP_METHOD=cbs Jerome is helping also here trying to understand the problem... https://github.com/silx-kit/silx/issues/4073

Bug#1060318: Info received (Bug#1060318: Info received (Bug#1060318: Info received (Bug#1060318: Info received (silx: autopkgtest failure with Python 3.12))))

2024-03-11 Thread PICCA Frederic-Emmanuel
POCL_WORK_GROUP_METHOD=cbs python3 test.py make it works $ POCL_WORK_GROUP_METHOD=cbs python3 test.py [SubCFG] Form SubCFGs in bsort_all [SubCFG] Form SubCFGs in bsort_horizontal [SubCFG] Form SubCFGs in bsort_vertical [SubCFG] Form SubCFGs in bsort_book [SubCFG] Form SubCFGs in bsort_file

Bug#1060318: Info received (Bug#1060318: Info received (Bug#1060318: Info received (silx: autopkgtest failure with Python 3.12)))

2024-03-11 Thread PICCA Frederic-Emmanuel
With latest version (PAS OK) $ dpkg -l | grep pocl ii libpocl2-common5.0-2.1 all common files for the pocl library ii libpocl2t64:amd64 5.0-2.1

Bug#1060318: Info received (Bug#1060318: Info received (silx: autopkgtest failure with Python 3.12))

2024-03-11 Thread PICCA Frederic-Emmanuel
Debian12 (OK) $ dpkg -l | grep pocl ii libpocl2:amd64 3.1-3+deb12u1 amd64Portable Computing Language library ii libpocl2-common 3.1-3+deb12u1 all

Bug#1060318: Info received (Bug#1060318: Info received (silx: autopkgtest failure with Python 3.12))

2024-03-11 Thread PICCA Frederic-Emmanuel
On Debian12 it works out of the box $ POCL_DEBUG=1 python3 test.py [2024-03-11 10:05:31.837738936]POCL: in fn pocl_install_sigfpe_handler at line 229: | GENERAL | Installing SIGFPE handler... [2024-03-11 10:05:31.868890390]POCL: in fn POclCreateCommandQueue at line 98: | GENERAL |

Bug#1060318: Info received (silx: autopkgtest failure with Python 3.12)

2024-03-10 Thread PICCA Frederic-Emmanuel
We already had the warning message [2024-03-10 14:26:18.189651850]POCL: in fn void appendToProgramBuildLog(cl_program, unsigned int, std::string&) at line 111: | ERROR | warning: /home/picca/.cache/pocl/kcache/tempfile_msXjLw.cl:861:14: AVX vector argument of type '__private fl

Bug#1060318: Info received (silx: autopkgtest failure with Python 3.12)

2024-03-10 Thread PICCA Frederic-Emmanuel
Here a log with POCL_DEBUG=all picca@cush:/tmp$ python3 test.py [2024-03-10 14:22:19.462191847]POCL: in fn pocl_install_sigfpe_handler at line 265: | GENERAL | Installing SIGFPE handler... [2024-03-10 14:22:19.475550217]POCL: in fn POclCreateCommandQueue at line 103: | GENERAL

Bug#1060318: Info received (silx: autopkgtest failure with Python 3.12)

2024-03-10 Thread PICCA Frederic-Emmanuel
111: | ERROR | warning: /home/picca/.cache/pocl/kcache/tempfile_NcEztR.cl:861:14: AVX vector argument of type '__private float8' (vector of 8 'float' values) without 'avx' enabled changes the ABI warning: /home/picca/.cache/pocl/kcache/tempfile_NcEztR.cl:893:14: AVX vector argument of type '__pri

Bug#1060318: Info received (silx: autopkgtest failure with Python 3.12)

2024-03-10 Thread PICCA Frederic-Emmanuel
Here a small script which trigger the errorfrom silx.image import medianfilter import numpy IMG = numpy.arange(1.0).reshape(100, 100) KERNEL = (1, 1) res = medianfilter.medfilt2d( image=IMG, kernel_size=KERNEL, engine="opencl", )

Bug#1060318: silx: autopkgtest failure with Python 3.12

2024-03-08 Thread PICCA Frederic-Emmanuel
=== platform linux -- Python 3.11.8, pytest-8.0.2, pluggy-1.4.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /home/picca/debian/science-team/pyvkfft plugins: anyio-4.2.0, dials-data-2.4.0, xvfb-3.0.0 collected 2

Bug#1065481: ITP: pynx -- Python tools for Nano-structures Crystallography

2024-03-05 Thread Picca Frédéric-Emmanuel
Package: wnpp Severity: wishlist Owner: Picca Frédéric-Emmanuel X-Debbugs-Cc: debian-de...@lists.debian.org, debian-pan-maintain...@alioth-lists.debian.net, pi...@debian.org * Package name: pynx Version : 2023.1.2-1 Upstream Contact: fa...@esrf.fr * URL : https

Bug#1060318: silx: autopkgtest failure with Python 3.12

2024-03-01 Thread PICCA Frederic-Emmanuel
With the silx 2.0.0 version the failire is located in the OpenCL part the backtrace is this one when running the median filter # build the packag eintht echroot and enter into it once build dgit --gbp sbuild --finished-build-commands '%SBUILD_SHELL' run this command to obtain the backtrace...

Bug#1063326: TypeError: first argument must be callable

2024-02-06 Thread Picca Frédéric-Emmanuel
Package: python3-sphinx Version: 5.3.0-4 Severity: important Dear Maintainer, Hello,, while preparing the new silx package, I got this error message from sphinx when calling this command line # build man pages pybuild --build -s custom -p $(PY3VER) --build-args="cd doc && env

Bug#1063028: cglm: 9.2.0 is not API compatible with 9.1.0

2024-02-04 Thread Picca Frédéric-Emmanuel
Source: cglm Severity: important Dear Maintainer, While working on my 'hkl' package I now have an FTBFS due to the 0.9.2 cglm version The error is hkl-binoculars-geometry.c: In function ‘hkl_binoculars_parameter_transformation_get’: hkl-binoculars-geometry.c:45:45: error: incompatible type

Bug#1063027: devscripts: [build-rdeps] does not work anymore

2024-02-04 Thread Picca Frédéric-Emmanuel
Package: devscripts Version: 2.23.7 Severity: important Dear Maintainer, While reporting a bug against cglm, I tried build-rdeps but got this message... $ build-rdeps cglm Reverse Build-depends in experimental/main: --- Use of uninitialized value

Bug#1062979: tango-db: the upgraded version of tango-db is not compatible with maria-db from bookworm

2024-02-04 Thread Picca Frédéric-Emmanuel
Package: tango-db Severity: important X-Debbugs-Cc: pi...@debian.org Dear Maintainer, I upgraded a computer from bullseye to bookwork. tango-db was installed with the bulleyes version before the upgrade. The upgrade went fine, so I installed the tango-starter (bookworm version). BUT the

Bug#1043240: transition: pandas 1.5 -> 2.1 - please upload fixes

2024-01-30 Thread PICCA Frederic-Emmanuel
for dials it seems that the CI works with pandas 2.1 from experimental. https://ci.debian.net/packages/d/dials/unstable/amd64/41962612/#S4 - Le 30 Jan 24, à 9:05, Rebecca N. Palmer rebecca_pal...@zoho.com a écrit : > I intend to upload pandas 2.x to unstable soon. These packages have a >

Bug#1061938: pyfai: Segfault when closing a dialg

2024-01-30 Thread Picca Frédéric-Emmanuel
Package: pyfai Version: 2023.9.0-1 Severity: important Dear Maintainer, Could you apply this patch in order to avoid a segfault in pyFAI-calib2 https://github.com/silx-kit/pyFAI/pull/2064 it correspond to this bug report https://github.com/silx-kit/pyFAI/issues/2047 Cheers -- System

Bug#1060807: zfp: please compile zfp with -DBIT_STREAM_WORD_TYPE=uint8

2024-01-14 Thread Picca Frédéric-Emmanuel
Source: zfp Severity: important Dear Maintainer, since the upload of zfp 1.0.1, the test of hdf5plugin are failing look at here https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1059842 It seems to me that the zfp library should be recompile with the previous flag. thanks Frederic. PS: Il

Bug#1058794: [Debian-pan-maintainers] [Help] Re: python-future: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.11 returned exit code 13

2024-01-04 Thread PICCA Frederic-Emmanuel
ok for me - Le 4 Jan 24, à 13:19, Alexandre Detiste alexandre.deti...@gmail.com a écrit : > Le jeu. 4 janv. 2024 à 07:48, Andreas Tille a écrit : >> > @Vincent: this one package "gtextfsm" is yours >> > do you green light an upload ? >> >> If you ask me the package is team maintained and a

Bug#1056792: bitshuffle: ftbfs with cython 3.0.x

2023-12-22 Thread PICCA Frederic-Emmanuel
It seems to me that the FTBFS was not due to cython 3.x but related to this bug https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1054716 now that this bug is solved, can you re run the build for bitshuffle ? Frederic

Bug#959964: What about moving bitshuffle into debian-science

2023-12-13 Thread picca
Would you mind to migrate bitshuffle under the Debian-science umbrella. this way I could fix the package (cython3, h5py, ...) issues and and upload the latest version. thanks for considering. Frederic

Bug#1058026: PyPI’s XML-RPC API is deprecated, causing errors when downloading packages.

2023-12-11 Thread Picca Frédéric-Emmanuel
Source: stdeb Severity: important X-Debbugs-Cc: pi...@debian.org Hello, while trying to use pupy-install, I got this error message /tmp$ pypi-download at Traceback (most recent call last): File "/usr/lib/python3/dist-packages/stdeb/transport.py", line 62, in request

Bug#1055915: sbuild-debian-developer-setup: Can not create an unstable chroot

2023-11-14 Thread picca
A workaround is to set DEBOOTSTRAP_DIR sudo DEBOOTSTRAP_DIR=/usr/share/debootstrap sbuild-debian-developer-setup

Bug#1055915: sbuild-debian-developer-setup: Can not create an unstable chroot

2023-11-14 Thread Picca Frédéric-Emmanuel
-setup info: L'utilisateur « picca » appartient déjà au groupe « sbuild ». I: SUITE: unstable I: TARGET: /srv/chroot/unstable-amd64-sbuild I: MIRROR: http://localhost:3142/deb.debian.org/debian I: Running debootstrap --arch=amd64 --variant=buildd --verbose --include=fakeroot,build-essential,eatmydata

Bug#1053701: cp: cannot stat '/etc/fonts/fonts.conf': No such file or directory

2023-10-09 Thread Picca Frédéric-Emmanuel
Package: linux-image-6.1.0-13-amd64 Version: 6.1.55-1 Severity: normal Dear Maintainer, I am preparing a virtual machine wher eI install the linux-headers-amd54 package. But it failed with this error message Setting up linux-image-6.1.0-13-amd64 (6.1.55-1) ...^M I: /vmlinuz is now a symlink

Bug#1051781: python3-h5py: where is the egg files

2023-09-19 Thread Picca Frédéric-Emmanuel
Package: python3-h5py Version: 3.7.0-8 Followup-For: Bug #1051781 X-Debbugs-Cc: pi...@debian.org Dear Maintainer, If I create a link ln -s h5py._debian_h5py_serial-3.7.0.dist-info h5py-3.7.0.dist-info under /usr/lib/python3/dist-packages It solves my issue. So my question is should the

Bug#1051935: /usr/lib/x86_64-linux-gnu/libg3d/plugins/import/imp_vrml.so: undefined symbol: yywrap

2023-09-14 Thread Frederic-Emmanuel Picca
Package: libg3d-plugins Version: 0.0.8-36 Severity: important X-Debbugs-Cc: pi...@debian.org Dear Maintainer, I am the maintainer of the hkl package. When I use the ghkl librarry, I get this error message (ghkl:1336510): LibG3D-WARNING **: 15:03:32.967: libg3d: plugins: failed to load

Bug#1051781: python3-h5py: where is the egg files

2023-09-12 Thread Picca Frédéric-Emmanuel
Package: python3-h5py Version: 3.7.0-8 Severity: important X-Debbugs-Cc: pi...@debian.org Dear Maintainer, I am thre maintainer of silx This package depende of python3-h5py and contain entry points. The build is ok, but once installed I get this error message when I try to start the

Bug#1051771: RM: genx [arm64 armel armhf i386 mips64el s390x] -- ROM; failure due to the numba dependency

2023-09-12 Thread Picca Frédéric-Emmanuel
Package: ftp.debian.org Severity: normal User: ftp.debian@packages.debian.org Usertags: remove X-Debbugs-Cc: g...@packages.debian.org, pi...@debian.org Control: affects -1 + src:genx Hello, the new version of genx added test about the numba part. Currently the numba package is in bad shape

Bug#1051767: RM: bornagain [arm64 armel armhf i386 ppc64el s390x] -- ROM; not yet supported by upstream

2023-09-12 Thread Picca Frédéric-Emmanuel
Package: ftp.debian.org Severity: normal User: ftp.debian@packages.debian.org Usertags: remove X-Debbugs-Cc: bornag...@packages.debian.org, pi...@debian.org Control: affects -1 + src:bornagain previously the unit test were not activated. So now we have a real picture of what is working and

Bug#1051614: onednn: FTBFS on bookworm

2023-09-10 Thread Picca Frédéric-Emmanuel
Source: onednn Severity: normal Dear Maintainer, I am reparing local backports of onednn on bookwork in order to backports pytorch-cuda for my institut. But it FTBFS due to missing symbols. dpkg-gensymbols: warning: debian/libdnnl2/DEBIAN/symbols doesn't match completely

Bug#1051342: Issue with the genx software

2023-09-06 Thread PICCA Frederic-Emmanuel
Hello, here you should find the informations. platform: Debina unstable python: ~$ python3 Python 3.11.5 (main, Aug 29 2023, 15:31:31) [GCC 13.2.0] on linux Type "help", "copyright", "credits" or "license" for more information. >>> $ dpkg -l | grep wx ii libwxbase3.2-1:amd64

Bug#1051342: Issue with the genx software

2023-09-06 Thread PICCA Frederic-Emmanuel
Hello, I am preparing the packaging of genx 3.6.22. When I try to quit the application I have this error message CRITICAL: uncought python error Traceback (most recent call last): File "/usr/lib/python3/dist-packages/genx/gui/main_window.py", line 1418, in eh_mb_quit if event.CanVeto()

Bug#1051342: genx: Can not quit the application from the Menu

2023-09-06 Thread Picca Frédéric-Emmanuel
Source: genx Severity: normal X-Debbugs-Cc: pi...@debian.org Dear Maintainer, If I try to quite the application with the menu quit, I get this CRITICAL: uncought python error Traceback (most recent call last): File "/usr/lib/python3/dist-packages/genx/gui/main_window.py", line 1418, in

Bug#1042949: /usr/bin/apply-multiarch-hints: apply-multiarch-hints failed with TypeError

2023-08-03 Thread Picca Frédéric-Emmanuel
Package: lintian-brush Version: 0.149 Severity: normal File: /usr/bin/apply-multiarch-hints Dear Maintainer, I try to use the multiarch hints but I get this error message Downloading new version of multi-arch hints. Traceback (most recent call last): File "/usr/bin/apply-multiarch-hints",

Bug#1042878: FTBFS: on all architectures

2023-08-02 Thread Picca Frédéric-Emmanuel
Source: epics-base Severity: important Dear Maintainer, please fix these FTBFS -- System Information: Debian Release: trixie/sid APT prefers unstable APT policy: (500, 'unstable'), (1, 'experimental') Architecture: amd64 (x86_64) Kernel: Linux 6.4.0-1-amd64 (SMP w/4 CPU threads; PREEMPT)

Bug#1042830: lintian-brush: refuse to proceed when files affected by gitattributes

2023-08-01 Thread Picca Frédéric-Emmanuel
Package: lintian-brush Version: 0.149 Severity: normal Dear Maintainer, I am preparing the new hyperspy package but when I try to run lintian-brush on it, I get this message $ lintian-brush /home/picca/debian/science-team/hyperspy: Please commit pending changes and remove unknown files

Bug#1041803: [Debian-pan-maintainers] Bug#1041803: hyperspy: FTBFS test_image fails

2023-08-01 Thread PICCA Frederic-Emmanuel
the old and new hyperspy is not compatible with imagio > 0.28. I kindly opened a bug report about the situation at the upstream git repository.

Bug#1042740: [Debian-pan-maintainers] Bug#1042740: dmrgpp: Please package the new 6.04 version

2023-07-31 Thread PICCA Frederic-Emmanuel
I filled a bug report about the new upstream. https://github.com/g1257/dmrgpp/issues/40 It is already fixed in the upstream git https://github.com/g1257/dmrgpp/commit/528501e4a5814d4cbb80e2cf16ea407f9e012ee6

Bug#1026864: dmrgpp: flaky autopkgtest on amd64: times out

2023-07-31 Thread PICCA Frederic-Emmanuel
and a comment about this issue https://github.com/g1257/dmrgpp/issues/38#issuecomment-1655740289

Bug#1042740: dmrgpp: Please package the new 6.04 version

2023-07-31 Thread Picca Frédéric-Emmanuel
Source: dmrgpp Version: 6.02-3 Severity: wishlist Dear Maintainer, A new version is available, could you package it -- System Information: Debian Release: trixie/sid APT prefers unstable APT policy: (500, 'unstable'), (1, 'experimental') Architecture: amd64 (x86_64) Kernel: Linux

Bug#1042403: pyqt6: could you package the documentation

2023-07-27 Thread Picca Frédéric-Emmanuel
Source: pyqt6 Severity: normal Dear Maintainer, I would be great if we could have the documentation available in a dedicated package. there is a sphinx_qt_documentation extension which rely on intersphinx in order to create link about PyQt5/6 API. to produce some good documentation. for now

Bug#1040159: epics-base: embedded yajl is vulnerable to CVE-2017-16516 and CVE-2022-24795

2023-07-26 Thread PICCA Frederic-Emmanuel
Hello, I dicovered that upstream modifier yajl in order to support json5. I am wondering if their modification could not be integrated in our yajl. I fill a burg report about this idea here https://github.com/epics-base/epics-base/issues/405 Tell me what is your opinion about this. Cheers

Bug#1041692: python3-mesonpy: could the build be verbose by default

2023-07-22 Thread Picca Frédéric-Emmanuel
Package: python3-mesonpy Version: 0.12.0-2 Severity: normal X-Debbugs-Cc: pi...@debian.org Dear Maintainer, I am packaging python-fabio and pyfai whcih use this new build system for python extensions. Now blhc complain that the compilation is not verbose. So I need to add something like this

Bug#1041608: RM: python-fabio [s390x] -- ROM; not supported on big endian arch

2023-07-21 Thread Picca Frédéric-Emmanuel
Package: ftp.debian.org Severity: normal User: ftp.debian@packages.debian.org Usertags: remove X-Debbugs-Cc: python-fa...@packages.debian.org, pi...@debian.org Control: affects -1 + src:python-fabio thanks for considering Frederic

Bug#1041443: [Debian-pan-maintainers] Bug#1041443: pyfai_2023.5.0+dfsg1-3_all-buildd.changes REJECTED

2023-07-19 Thread PICCA Frederic-Emmanuel
> I am just the messenger here, if you disagree, please feel free to > contact ftpmasters or lintian maintainers. This was not a rant about this, I just wanted to understand what is going on :). > Your package has been built successfully on (some) buildds, but then the > binaries upload got

Bug#1041443: [Debian-pan-maintainers] Bug#1041443: Bug#1041443: pyfai_2023.5.0+dfsg1-3_all-buildd.changes REJECTED

2023-07-19 Thread PICCA Frederic-Emmanuel
I just check this date is in the upstream tar file https://files.pythonhosted.org/packages/54/84/ea12e176489b35c4610625ce56aa2a1d91ab235b0caa71846317bfd1192f/pyfai-2023.5.0.tar.gz

Bug#1041443: [Debian-pan-maintainers] Bug#1041443: pyfai_2023.5.0+dfsg1-3_all-buildd.changes REJECTED

2023-07-19 Thread PICCA Frederic-Emmanuel
ok, it seems that I generated an orig.tag.gz with this (Thu Jan 1 00:00:00 1970). I can not remember which tool I used to generate this file. gbp import-orig --uscan or deb-new-upstream Nevertheless, why is it a serious bug ? thanks Frederic

Bug#1035717: closed by Sebastian Ramacher (unblock binoculars)

2023-05-11 Thread picca
thanks a lot

Bug#1035717: unblock: binoculars/0.0.13-1

2023-05-08 Thread Picca Frédéric-Emmanuel
ian/changelog 2023-02-21 14:13:26.0 +0100 +++ binoculars-0.0.13/debian/changelog 2023-04-14 19:23:27.0 +0200 @@ -1,3 +1,11 @@ +binoculars (0.0.13-1) unstable; urgency=medium + + * New upstream version 0.0.13 + * d/control: B-D removed python3-vtk9 + * d/patches: removed a

Bug#1033600: emacs: File mode specification error: (file-missing Cannot open load file Aucun fichier ou dossier de ce type pylint)

2023-03-28 Thread PICCA Frederic-Emmanuel
If I remove the pylint package, no more error...

Bug#1033600: emacs: File mode specification error: (file-missing Cannot open load file Aucun fichier ou dossier de ce type pylint)

2023-03-28 Thread Picca Frédéric-Emmanuel
: Minibuffer window is not active Mark set [3 times] This is not such an issue during an interractive session, but... I use this in the hkl package, and it cause an FTBFS like this make[1] : on entre dans le répertoire «  /home/picca/src/repo.or.cz/hkl/Documentation » env GI_TYPELIB_PATH=../hkl \ /bin/bash

Bug#1030015: elpa-powerline: lot's of warning when starting emacs

2023-01-30 Thread Frederic-Emmanuel Picca
Package: elpa-powerline Version: 2.4-4 Severity: minor X-Debbugs-Cc: pi...@debian.org Dear Maintainer, When I start emacs, I have all these warning Warning (comp): powerline.el:115:1: Warning: custom-declare-variable `powerline-gui-use-vcs-glyph' docstring wider than 80 characters Disable

Bug#1025049: asymptote: Error in shipout3

2023-01-20 Thread Picca Frédéric-Emmanuel
Package: asymptote Version: 2.83+ds-1+b1 Followup-For: Bug #1025049 X-Debbugs-Cc: pi...@debian.org Dear Maintainer, Here the backtrace generated after the crash, it seems that there is an Arithmetic Exception. the gl parameter at line 23 seems strange #23 0x5591db410072 in gl::glrender

Bug#1025049: /usr/bin/asy: Re: asymptote: Error in shipout3

2023-01-20 Thread Picca Frédéric-Emmanuel
Package: asymptote Version: 2.83+ds-1+b1 Followup-For: Bug #1025049 X-Debbugs-Cc: pi...@debian.org Dear Maintainer, I can reproduce this bug with my sway environement. But If I use a computer withe Debian/sid and grome it works. I am wondering if this is not an issue between wayland and

Bug#1025667: RM: facet-analyser [i386] -- ROM; Depends on libinsighttoolkit5-dev which is not available on 32bit arch

2022-12-07 Thread Picca Frédéric-Emmanuel
Package: ftp.debian.org Severity: normal User: ftp.debian@packages.debian.org Usertags: remove X-Debbugs-Cc: facet-analy...@packages.debian.org, pi...@debian.org Control: affects -1 + src:facet-analyser

Bug#1024859: change in the extention importation with 3.11

2022-12-06 Thread PICCA Frederic-Emmanuel
There is a fix from the upstream around enum. https://github.com/boostorg/python/commit/a218babc8daee904a83f550fb66e5cb3f1cb3013 Fix enum_type_object type on Python 3.11 The enum_type_object type inherits from PyLong_Type which is not tracked by the GC. Instances doesn't have to be tracked

Bug#1024859: change in the extention importation with 3.11

2022-12-06 Thread PICCA Frederic-Emmanuel
in order to debug this, I started gdb set a breakpoint in init_module_scitbx_linalg_ext then a catch throw and I end up with this backtrace Catchpoint 2 (exception thrown), 0x770a90a1 in __cxxabiv1::__cxa_throw (obj=0xb542e0, tinfo=0x772d8200 , dest=0x772c1290 ) at

Bug#1025575: python3-h5py: h5py does not provide dh-python usable meta data in order to compute dependencies

2022-12-06 Thread picca
Package: python3-h5py Version: 3.7.0-3 Severity: normal Dear Maintainer, I am packaging pymca and when I build it I get this error message D: dh_python3 pydist:173: trying to find dependency for h5py (python=None) D: dh_python3 pydist:277: invoking dpkg -S *python3/*/[Hh]5[Pp][Yy]-?*.*-info

Bug#1024859: cctbx: (autopkgtest) needs update for python3.11: initialization of scitbx_linalg_ext raised unreported exception

2022-12-06 Thread picca
To reproduce the problem Python3.10: :~/$ python3.10 Python 3.10.8 (main, Nov 4 2022, 09:21:25) [GCC 12.2.0] on linux Type "help", "copyright", "credits" or "license" for more information. import scitbx_linalg_ext Python3.11 :~/$ python3.11 Python 3.11.0+ (main, Nov 4 2022, 09:23:33)

Bug#1025049: asymptote: Error in shipout3

2022-11-29 Thread picca
Le 2022-11-29 23:46, Hilmar Preuße a écrit : Am 29.11.2022 um 10:02 teilte Picca Frédéric-Emmanuel mit: Hello, I imagine that the zzz1.asy file is my B_b3_y.asy, right ? if so, something must be different between your environment and mine. I use the latest unstable with gostscript 10

Bug#1025049: asymptote: Error in shipout3

2022-11-29 Thread Picca Frédéric-Emmanuel
Package: asymptote Version: 2.83+ds-1+b1 Severity: normal X-Debbugs-Cc: pi...@debian.org Dear Maintainer, while working on the hkl package I found that asy doe snot compile anymore my files. /usr/bin/asy -config "" -d -render=4 -f png -o 3S+1D.png 3S+1D.asy shipout3(prefix,f,preview ?

Bug#1013158: facet-analyser: vtk[6,7] removal

2022-11-21 Thread PICCA Frederic-Emmanuel
Hello Anton, I have just pushed a few dependencies in the -dev package in the salsa repo I did not updated the changelog. Cheers Fred

Bug#1023260: sightviewer: Instruction non permise (core dumped)

2022-11-01 Thread Picca Frédéric-Emmanuel
Package: sightviewer Version: 21.1.1-2 Severity: important Dear Maintainer, while trying to start this software, I got a Instruction non permise (core dumped) the backtrace (not that usefull but at least it shows that the probleme is in the libsight_core library (gdb) bt #0

Bug#1013158: facet-analyser: vtk[6,7] removal

2022-11-01 Thread PICCA Frederic-Emmanuel
not exist on the server or you don't have permissions to access it: [404] Object does not exist on the server or you don't have permissions to access it Errors logged to /home/experiences/instrumentation/picca/debian/science-team/paraview/.git/lfs/logs/20221101T101535.441130442.log Use `git lfs

Bug#1022108: RM: cctbx [armel armhf i386] -- ROM; no upstream support for 32bit arch

2022-10-20 Thread Picca Frédéric-Emmanuel
Package: ftp.debian.org Severity: normal Hello, this package compile on 32bit arch but the unit test doesn not pass on these architecture. After a discussion with the upstream it is clear that no support at all will be provided. This is why I request the removal. On these architectures I now

Bug#1021930: RM: guiqwt [armel ppc64el s390x] -- ROM; depends on pyqt5webengine which does not build on a bunch of arch

2022-10-17 Thread Picca Frédéric-Emmanuel
Package: ftp.debian.org Severity: normal In order to let guiqwt migrate into testing, it should be removed from the requested arch. The new qt5webengine does not build on these qrchitecture. thanks for considering. Fred

Bug#1016598: [Debian-pan-maintainers] Bug#1016598: binoculars: vtk[6, 7] removal

2022-10-16 Thread PICCA Frederic-Emmanuel
Hello François, thanks a lot, I removed the NMU number and release a -2 package. (uploaded) thanks for your contribution to Debian. Fred

Bug#1016839: /usr/lib/noweb/numarkup: not found

2022-08-08 Thread Picca Frédéric-Emmanuel
Source: noweb Version: 2.12-1 Severity: important X-Debbugs-Cc: pi...@debian.org Hello, I try to update the package cbflib. This package contain a nuweb file. Since nuweb is not available, I try to use noweb, but it ends up with this error $ nuweb2noweb pycbf.w /usr/bin/nuweb2noweb: 7:

Bug#1016023: pypi2deb : does not deal with proxy

2022-07-25 Thread Picca Frédéric-Emmanuel
Package: pypi2deb Version: 3.20220721 Severity: normal X-Debbugs-Cc: pi...@debian.org Hello, In my institut there is https_proxy and py2dsp doesn not work behind there proxy. It seems that aihttp must be configure to use the system proxy.

Bug#1010258: python3-pymca5: flaky autopkgtest on i386

2022-04-27 Thread picca
On 2022-04-27 11:47, Julian Gilbey wrote: Package: python3-pymca5 Version: 5.7.1+dfsg-1 Severity: normal X-Debbugs-Cc: Picca Frédéric-Emmanuel Uploading a new version of python3-qtconsole with only changes to the autopkgtest suite (no changes to the python3 module at all) caused those packages

Bug#1008119: [Debian-pan-maintainers] Bug#1008119: Bug#1008119: src:pyfai: fails to migrate to testing for too long: autopkgtest regression

2022-03-23 Thread PICCA Frederic-Emmanuel
It seems that it failing now https://ci.debian.net/packages/p/pyfai/ I am on 0.21.2 but I do not know if it solve this mask issue. Cheers Fred

Bug#1003061: [Debian-pan-maintainers] Bug#1003061: bug 1003061: dmrgpp: autopkgtest failure on armhf: segmentation fault

2022-03-10 Thread PICCA Frederic-Emmanuel
Hello Paul, just for info, I have already reported this issue here https://github.com/g1257/dmrgpp/issues/38 cheers Fred.

Bug#1001168: [Debian-pan-maintainers] Bug#1001168: hkl: FTBFS on mipsel: FAIL: trajectory.py

2022-01-22 Thread PICCA Frederic-Emmanuel
Is it not better to use the DEB__MAINT_APPEND variable in order to deal with this issue ?

Bug#1003037:

2022-01-08 Thread PICCA Frederic-Emmanuel
It seems that this is an issue in gcc has observed when compiling tensorflow https://zenn.dev/nbo/scraps/8f1505e365d961

Bug#1001168: Info received (Bug#1001168: Info received (Bug#1001168: hkl: FTBFS on mipsel: FAIL: trajectory.py))

2022-01-03 Thread PICCA Frederic-emmanuel
Built with gcc-11 and -fno-lto it doesn not work. (sid_mips64el-dchroot)picca@eller:~/matplotlib/build/lib.linux-mips64-3.9$ ../../../test.py Segmentation fault (sid_mips64el-dchroot)picca@eller:~/matplotlib/build/lib.linux-mips64-3.9$ PYTHONPATH=. ../../../test.py Segmentation fault

Bug#1001168: Info received (Bug#1001168: hkl: FTBFS on mipsel: FAIL: trajectory.py)

2022-01-03 Thread PICCA Frederic-emmanuel
I tested matplotlib built with numpy 0.17 0.19 0.21. each time I got the segfault. another difference was the gcc compiler. So I switched to gcc-10 (sid_mips64el-dchroot)picca@eller:~/matplotlib$ CC=gcc-10 python3 setup.py build if failed with this error lto1: fatal error: bytecode stream

Bug#1001168: Info received (Bug#1001168: Info received ())

2021-12-24 Thread PICCA Frederic-emmanuel
If I run in the sid chroot, but with the binaryed built from bullseye, it works. (sid_mips64el-dchroot)picca@eller:~/matplotlib-3.5.0/build/lib.linux-mips64-3.9$ rm toto.png (sid_mips64el-dchroot)picca@eller:~/matplotlib-3.5.0/build/lib.linux-mips64-3.9$ python3 test.py (sid_mips64el-dchroot

Bug#1001168: Info received ()

2021-12-24 Thread PICCA Frederic-emmanuel
Here no error during the build of numpy 1.19.5 = 10892 passed, 83 skipped, 108 deselected, 19 xfailed, 2 xpassed, 2 warnings in 1658.41s (0:27:38) = but 109 for numpy 1.21... = 14045 passed, 397 skipped, 1253 deselected, 20 xfailed, 2 xpassed, 2 warnings, 109 errors in 869.47s (0:14:29) =

Bug#1001168: Info received ()

2021-12-24 Thread PICCA Frederic-emmanuel
I investigated a bit more, it seems that cover is wrong. In a bullseye chroot it works $ python3 ./test.py (bullseye_mips64el-dchroot)picca@eller:~/matplotlib-3.5.0/build/lib.linux-mips64-3.9$ ls matplotlib mpl_toolkits pylab.py test.py toto.png I found that the test failed between

Bug#1001168: full python backtrace and print locals

2021-12-24 Thread PICCA Frederic-emmanuel
the full python backtrace #8 #14 Frame 0x120debd80, for file /home/picca/matplotlib-3.5.0/build/lib.linux-mips64-3.9/matplotlib/lines.py, line 2888, in draw (self=, figure=<...>, _transform=None, _transformSet=False, _visible=True, _animated=False, _alpha=None, clipbox=None, _clippat

Bug#1001168:

2021-12-24 Thread PICCA Frederic-emmanuel
Here the py-bt (gdb) py-bt Traceback (most recent call first): File "/home/picca/matplotlib-3.5.0/build/lib.linux-mips64-3.9/matplotlib/lines.py", line 2888, in draw File "/home/picca/matplotlib-3.5.0/build/lib.linux-mips64-3.9/matplotlib/artist.py", line 50, in dra

Bug#1001168: Info received (Bug#1001168: hkl: FTBFS on mipsel: FAIL: trajectory.py)

2021-12-08 Thread PICCA Frederic-Emmanuel
I can confirm that the bullseye matplotlib does not produce a segfault

Bug#1001168: hkl: FTBFS on mipsel: FAIL: trajectory.py

2021-12-08 Thread PICCA Frederic-Emmanuel
This small script trigger the segfault. #!/usr/bin/env python3 import matplotlib import matplotlib.pyplot as plt plt.figure() plt.title("foo") plt.savefig("toto.png")

Bug#1001168: hkl: FTBFS on mipsel: FAIL: trajectory.py

2021-12-08 Thread PICCA Frederic-Emmanuel
bugs report are already filled on matplotlib #1000774 and #1000435 I will try to see if this is identical...

Bug#1001168: hkl: FTBFS on mipsel: FAIL: trajectory.py

2021-12-08 Thread PICCA Frederic-Emmanuel
Here the backtrace on mips64el #0 agg::pixfmt_alpha_blend_rgba, agg::order_rgba>, agg::row_accessor >::blend_solid_hspan(int, int, unsigned int, agg::rgba8T const&, unsigned char const*) (covers=0x100 , c=..., len=, y=166, x=, this=) at

Bug#996484: Doesn not starts

2021-10-14 Thread Picca Frédéric-Emmanuel
Package: pushover Version: 0.0.5+git20180909-4+b2 Severity: important X-Debbugs-Cc: pi...@debian.org Hello, while trying to play with pushover, I got this message $ pushover Using portable datadir: ./data File not found: ./data/pushover/images/dominoes.png File not found:

Bug#994226:

2021-09-30 Thread PICCA Frederic-Emmanuel
Hello reading this I do not understand what need to be changed in the init script https://www.freedesktop.org/wiki/Software/systemd/NetworkTarget/ Whenever systemd encounters a $network dependency in LSB headers of init scripts it will translate this to a Wants= and After= dependency on

Bug#994882: ITS: vitables

2021-09-24 Thread PICCA Frederic-Emmanuel
ack ;) sorry for the delay. You can commit directly to the repository. Cheers Fred De : Benda Xu [o...@debian.org] Envoyé : vendredi 24 septembre 2021 10:24 À : Anton Gladky Cc : 994...@bugs.debian.org; PICCA Frederic-Emmanuel Objet : Re: Bug#994882

Bug#991238: vtkPVWebExporter.cxx:63 WARN| Failed to import paraview.web.vtkjs_helper module.

2021-07-18 Thread Picca Frédéric-Emmanuel
Package: paraview Version: 5.9.0-2 Severity: normal X-Debbugs-Cc: pi...@debian.org Hello, I am working on a paraview plugin, https://github.com/picca/FacetAnalyser But when I run the test suit, I get this error message 1: ( 8.114s) [paraview] vtkPVWebExporter.cxx:63WARN| Failed

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