Bug#1022282: staden-io-lib: FTBFS: ./data/9827_rand3.cram.fai: No such file or directory

2022-10-27 Thread Andreas Tille
Dear Bernhard, > A short term solution might be the patch in [7] which makes > the build and tests succeed without "implicit declarations". Thanks a lot for your explicit explanation and the helpful patch. I've just uploaded your patch Andreas. -- http://fam-tille.de

Bug#1022282: staden-io-lib: FTBFS: ./data/9827_rand3.cram.fai: No such file or directory

2022-10-27 Thread Bernhard Übelacker
Dear Maintainer, the original staden-io-lib seems to be built with libhtscodecs2 in version 1.2.2-1 [1]. The rebuild seems to be using libhtscodecs2 in version 1.3.0-4. Unfortunately htscodecs upstream integrated this commit [3], which renamed e.g. function encode_names to tok3_encode_names. It

Bug#1022282: staden-io-lib: FTBFS: ./data/9827_rand3.cram.fai: No such file or directory

2022-10-23 Thread Lucas Nussbaum
Source: staden-io-lib Version: 1.14.14+dfsg-1 Severity: serious Justification: FTBFS Tags: bookworm sid ftbfs User: lu...@debian.org Usertags: ftbfs-20221023 ftbfs-bookworm Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > make[3]: