Source: gromacs Version: 2023.3-1 Severity: important Tags: ftbfs patch upstream User: debian-ri...@lists.debian.org Usertags: riscv64 X-Debbugs-Cc: debian-ri...@lists.debian.org
Dear maintainer, Since the build daemons have been upgraded to kernel 6.6, gromacs FTBFS with SIGILL in the testsuite: | 69% tests passed, 26 tests failed out of 83 | | Label Time Summary: | GTest = 156.25 sec*proc (81 tests) | IntegrationTest = 44.87 sec*proc (25 tests) | MpiTest = 21.70 sec*proc (19 tests) | QuickGpuTest = 25.14 sec*proc (17 tests) | SlowGpuTest = 26.10 sec*proc (14 tests) | SlowTest = 99.77 sec*proc (13 tests) | UnitTest = 11.62 sec*proc (43 tests) | | Total Test time (real) = 156.87 sec | | The following tests FAILED: | 1 - GmxapiExternalInterfaceTests (ILLEGAL) | 4 - NbLibSamplesTestArgon (ILLEGAL) | 5 - NbLibSamplesTestMethaneWater (ILLEGAL) | 8 - NbLibTprTests (ILLEGAL) | 9 - NbLibIntegrationTests (ILLEGAL) | 42 - GmxTimingTests (ILLEGAL) | 60 - MdrunOutputTests (ILLEGAL) | 61 - MdrunModulesTests (ILLEGAL) | 62 - MdrunIOTests (ILLEGAL) | 63 - MdrunTestsOneRank (ILLEGAL) | 64 - MdrunTestsTwoRanks (ILLEGAL) | 65 - MdrunSingleRankAlgorithmsTests (ILLEGAL) | 66 - MdrunNonIntegratorTests (ILLEGAL) | 67 - MdrunTpiTests (ILLEGAL) | 68 - MdrunMpiTests (ILLEGAL) | 72 - MdrunMpi1RankPmeTests (ILLEGAL) | 73 - MdrunMpi2RankPmeTests (ILLEGAL) | 74 - MdrunCoordinationBasicTests1Rank (ILLEGAL) | 75 - MdrunCoordinationBasicTests2Ranks (ILLEGAL) | 76 - MdrunCoordinationCouplingTests1Rank (ILLEGAL) | 77 - MdrunCoordinationCouplingTests2Ranks (ILLEGAL) | 78 - MdrunCoordinationConstraintsTests1Rank (ILLEGAL) | 79 - MdrunCoordinationConstraintsTests2Ranks (ILLEGAL) | 80 - MdrunFEPTests (ILLEGAL) | 81 - MdrunPullTests (ILLEGAL) | 83 - MdrunVirtualSiteTests (ILLEGAL) | Errors while running CTest | make: *** [debian/rules:113: build-basic] Error 8 | dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 A full build log is available here: https://buildd.debian.org/status/fetch.php?pkg=gromacs&arch=riscv64&ver=2023.3-1%2Bb1&stamp=1706327375&raw=0 This happens because the rdcycle instruction has been changed to a privileged instruction starting with this kernel version. A patch to fix the issue has been submitted upstream [1]. Would it be possible to include it in the next upload? Thanks Aurelien [1] https://gitlab.com/gromacs/gromacs/-/merge_requests/4040
