Hi Diane,
On Thu, Jun 12, 2014 at 03:05:17PM -0700, Diane Trout wrote:
I finally managed to fix this bug.
Cool.
python-numpy provides dh_numpy that will insert a python-numpy-abi$VERSION
into the python dependencies to make it more obvious when a package needs to
be recompiled for a new
Hello,
I finally managed to fix this bug.
python-numpy provides dh_numpy that will insert a python-numpy-abi$VERSION
into the python dependencies to make it more obvious when a package needs to
be recompiled for a new change in numpy's abi.
All the fixes necessary to implement that are in
Hi Diane,
I have realised that there are some new versions of HTSeq out and may be
the problem will just be fixed by a new version? Please drop a note here
to confirm that you are working on it or somebody else should step in.
Kind regards
Andreas.
On Fri, Mar 28, 2014 at 05:00:28PM
Hi Diane,
just to make sure you did not missunderstood: While the version of
numpy might have been the cause of this bug I was talking about newer
versions og HTSeq.
Kind regards
Andreas.
On Mon, Mar 31, 2014 at 08:03:36AM -0700, Diane Trout wrote:
Hi,
Henry is my coworker so we
Oh yes.
Also I know upstream has 0.6.1 released, and I was planning on trying to work
on an updated package today.
Diane
On Monday, March 31, 2014 17:10:29 Andreas Tille wrote:
Hi Diane,
just to make sure you did not missunderstood: While the version of
numpy might have been the cause
Hi,
Henry is my coworker so we did some of the debugging at his desk.
Recompiling against a newer version of numpy works. However I think the
package really should have a upper limit for its numpy dependency so it
doesn't stop working when numpy gets upgraded behind hit.
However I wanted to
On Monday, March 31, 2014 17:10:29 Andreas Tille wrote:
Hi Diane,
just to make sure you did not missunderstood: While the version of
numpy might have been the cause of this bug I was talking about newer
versions og HTSeq.
Hi,
I tried to update the package, but discovered that upstream
Package: python-htseq
Version: 0.5.4p3-2
Severity: normal
Here's a trace of the error message received when trying to import HTSeq:
Traceback (most recent call last):
File
/usr/local/lib/R/site-library/DEXSeq/python_scripts/dexseq_prepare_annotation.py,
line 33, in module
import HTSeq
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