Bug#807150: gubbins: FTBFS on i386: Invalid ALN file for multiple lines per seq

Hi Andrew, I just uploaded the new version to Debian unstable. Please note that you somehow missed to add -lsubunit to src/Makefile.am. I adapted the Debian patch for the new version: https://anonscm.debian.org/cgit/debian-med/gubbins.git/tree/debian/patches/add_missing_lib_for_check.patch

Bug#807150: gubbins: FTBFS on i386: Invalid ALN file for multiple lines per seq

Hi Andreas, Sascha and I had a look at -lsubunit the other day and he’s going to put in a patch. Its not needed in the gubbins or snp_sites build files, it appears to be an issue with the dependancies in check in Debian. Regards, Andrew > On 9 Dec 2015, at 16:36, Andreas Tille wrote: > > Hi A

Bug#807150: gubbins: FTBFS on i386: Invalid ALN file for multiple lines per seq

Hi, I have pushed a fix for the build error on i386 as version 1.4.4 Details are here: https://github.com/sanger-pathogens/gubbins/pull/158 I replicated the bug on i386 and fixed it. The tests also pass on amd64 & OSX 10.10 Regards, Andrew

Bug#807150: gubbins: FTBFS on i386: Invalid ALN file for multiple lines per seq

Thanks, Andrew > On 6 Dec 2015, at 06:40, Andreas Tille wrote: > > Hi Andrew, > > I hereby forward a build issue on i386 architecture. > > Kind regards > > Andreas. > > On Sat, Dec 05, 2015 at 10:30:32PM -0500, Aaron M. Ucko wrote: >> Source: gubbins >> Version: 1.4.3-1 >> Severity: im

Bug#807150: gubbins: FTBFS on i386: Invalid ALN file for multiple lines per seq

Hi Andrew, I hereby forward a build issue on i386 architecture. Kind regards Andreas. On Sat, Dec 05, 2015 at 10:30:32PM -0500, Aaron M. Ucko wrote: > Source: gubbins > Version: 1.4.3-1 > Severity: important > Justification: fails to build from source > > The i386 build of gubbins faile

Bug#807150: gubbins: FTBFS on i386: Invalid ALN file for multiple lines per seq

Source: gubbins Version: 1.4.3-1 Severity: important Justification: fails to build from source The i386 build of gubbins failed: FAIL: run_all_tests Testsuite summary for gubbins 1.4.3 ===