Bug#868919: physamp: FTBFS: AlignmentOptimizer.cpp:39:32: fatal error: Bpp/Seq/Alphabet.all: No such file or directory

2017-07-20 Thread Julien Yann Dutheil
Hi Andreas, On Thu, Jul 20, 2017 at 11:21 AM, Andreas Tille wrote: > Hi Julien, > > On Thu, Jul 20, 2017 at 10:49:10AM +0200, Julien Yann Dutheil wrote: > > Yes, should be. But I noticed some other problems... I have made a > version > > 1.0.2 addressing them. Then I

Bug#868919: physamp: FTBFS: AlignmentOptimizer.cpp:39:32: fatal error: Bpp/Seq/Alphabet.all: No such file or directory

2017-07-20 Thread Andreas Tille
Hi Julien, On Thu, Jul 20, 2017 at 10:49:10AM +0200, Julien Yann Dutheil wrote: > Yes, should be. But I noticed some other problems... I have made a version > 1.0.2 addressing them. Then I synchronized the upstream branch accordingly, > and then merged the master branch and the upstream branch,

Bug#868919: physamp: FTBFS: AlignmentOptimizer.cpp:39:32: fatal error: Bpp/Seq/Alphabet.all: No such file or directory

2017-07-20 Thread Julien Yann Dutheil
Dear Andreas, Yes, should be. But I noticed some other problems... I have made a version 1.0.2 addressing them. Then I synchronized the upstream branch accordingly, and then merged the master branch and the upstream branch, is that the correct way to do? Version 1.0.2-1 should then normally build

Bug#868919: physamp: FTBFS: AlignmentOptimizer.cpp:39:32: fatal error: Bpp/Seq/Alphabet.all: No such file or directory

2017-07-19 Thread Andreas Tille
Hi Julien, I guess this issue is connected to our latest changes in the library packages. Kind regards Andreas. On Wed, Jul 19, 2017 at 05:52:18PM +0200, Lucas Nussbaum wrote: > Source: physamp > Version: 0.2.0-1 > Severity: serious > Tags: buster sid > User: debian...@lists.debian.org

Bug#868919: physamp: FTBFS: AlignmentOptimizer.cpp:39:32: fatal error: Bpp/Seq/Alphabet.all: No such file or directory

2017-07-19 Thread Lucas Nussbaum
Source: physamp Version: 0.2.0-1 Severity: serious Tags: buster sid User: debian...@lists.debian.org Usertags: qa-ftbfs-20170719 qa-ftbfs Justification: FTBFS on amd64 Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > cd