Bug#970340: [Debian-med-packaging] Bug#970340: rna-star: autopkgtest regression: --genomeSAindexNbases 8 is too large for the genome size=99940

2020-09-15 Thread Andreas Tille
Dear Sascha, On Tue, Sep 15, 2020 at 04:32:02PM +0200, Sascha Steinbiss wrote: > > I can confirm that that was the issue. I have pushed a fix to git and > will make an upload later if there are no objections. No objections for fixing a bug at all. ;-) Thanks a lot Andreas. -- http://f

Bug#970340: [Debian-med-packaging] Bug#970340: rna-star: autopkgtest regression: --genomeSAindexNbases 8 is too large for the genome size=99940

2020-09-15 Thread Sascha Steinbiss
Hi all, >> you once wrote that test. Do you have any idea how to fix it? > > Since this is just a warning, it might be sufficient to simply add > > Restrictions: allow-stderr > > That would make sure that printing a warning to stderr does not cause > the test to fail. I will test this later

Bug#970340: rna-star: autopkgtest regression: --genomeSAindexNbases 8 is too large for the genome size=99940

2020-09-15 Thread Sascha Steinbiss
Hi all, > you once wrote that test. Do you have any idea how to fix it? Since this is just a warning, it might be sufficient to simply add Restrictions: allow-stderr That would make sure that printing a warning to stderr does not cause the test to fail. I will test this later and fix it if t

Bug#970340: rna-star: autopkgtest regression: --genomeSAindexNbases 8 is too large for the genome size=99940

2020-09-15 Thread Andreas Tille
Hi Sascha, you once wrote that test. Do you have any idea how to fix it? Steffen, you know that package. Any idea what to do? Kind regards Andreas. On Mon, Sep 14, 2020 at 10:15:12PM +0200, Paul Gevers wrote: > Source: rna-star > Version: 2.7.5c+dfsg-1 > X-Debbugs-CC: debian...@lists.

Bug#970340: rna-star: autopkgtest regression: --genomeSAindexNbases 8 is too large for the genome size=99940

2020-09-14 Thread Paul Gevers
Source: rna-star Version: 2.7.5c+dfsg-1 X-Debbugs-CC: debian...@lists.debian.org Severity: serious User: debian...@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of rna-star the autopkgtest of rna-star fails in testing when that autopkgtest is run with the binary p