Bug#671524: Dropping coverage patch in Samtools ?

2015-06-16 Thread Charles Plessy
On Wed, Nov 26, 2014 at 3:49 AM, Charles Plessy ple...@debian.org wrote: in recent versions of samtools, the mpileup command has a new option to specify the coverage at run time. Would it be fine to drop our patch that was raising the default coverage cap from 8,000 to 1,000,000

Bug#659070: bad internal links on www.debian.org for developers-reference

2015-06-13 Thread Charles Plessy
as much time for me to remember how the script works than to learn it again from scratch. Have a nice week-end, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas

Bug#788283: jessie-pu: package r-cran-rcurl/1.95-4.3-1+deb8u1

2015-06-09 Thread Charles Plessy
:59.0 +0900 +++ r-cran-rcurl-1.95-4.3/debian/changelog 2015-06-09 21:54:48.0 +0900 @@ -1,3 +1,10 @@ +r-cran-rcurl (1.95-4.3-1+deb8u1) jessie; urgency=medium + + * Team upload. + * Build-Depend on libcurl4-openssl-dev only (Closes: #786473). + + -- Charles Plessy ple

Bug#787816: Replace FHS 2.3 by FHS 3.0 in the Policy.

2015-06-05 Thread Charles Plessy
-- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#787571: How about transferring /etc/mime.types from mime-support to base-files.

2015-06-02 Thread Charles Plessy
://bugs.debian.org/786889. Alternatively, we could ship this file in base-files, since it is among these traditional Unix files that one always expects to be available. But it has frequent updates, to it may be extra work for you. What do you think about this ? Have a nice day, -- Charles Plessy

Bug#787459: mime-support: Please document ~/.mailcap-order

2015-06-01 Thread Charles Plessy
=4cd9ea47eca1ddbca3f517935669faa96480aeec Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#787285: File RegExp.pas, documented in debian/copyright is not in the package anymore.

2015-05-30 Thread Charles Plessy
Package: cqrlog Severity: wishlist Hi, debian/copyright gives the license of RegExp.pas, and this license has some borderline terms, but fortunately the file is not in the package anymore. Maybe you can remove this part from debian/copyright ? Have a nice day, -- Charles Plessy Tsurumi

Bug#680109: Missing note that e-mails to debian-...@lists.debian.org are published

2015-05-27 Thread Charles Plessy
Le Wed, May 27, 2015 at 10:20:54AM +0200, Laura Arjona Reina a écrit : I used the note that is already published in https://www.debian.org/contact Actually, I do not see the note on https://www.debian.org/contact... (Assuming that what you mean by the note is To report a problem with the web

Bug#680109: Advice on bug #680109 (proposal would break translations of the website footer)

2015-05-27 Thread Charles Plessy
of time). Have a nice day, Charles -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#680109: Missing note that e-mails to debian-...@lists.debian.org are published

2015-05-27 Thread Charles Plessy
a nice day, Charles -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-www-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org Archive: https://lists.debian.org/20150527065539.gm4...@falafel.plessy.net -- To UNSUBSCRIBE

Bug#786889: ITP: media-types -- List of media types associated to file suffixes

2015-05-26 Thread Charles Plessy
Package: wnpp Severity: wishlist Owner: Charles Plessy ple...@debian.org Package name: media-types Version : 2.1.44 Upstream Author : Mostly Ville Skyttä ville.sky...@iki.fi, for Fedora URL : https://git.fedorahosted.org/cgit/mailcap.git/tree/mime.types License

Bug#786473: [Debian-med-packaging] Bug#786473: r-cran-rcurl: Linking to the NSS library causes failures.

2015-05-22 Thread Charles Plessy
Hi Andreas, Le Fri, May 22, 2015 at 07:29:20AM +0200, Andreas Tille a écrit : Good catch. Well, actually it is me who was caught :) On Fri, May 22, 2015 at 11:29:12AM +0900, Charles Plessy wrote: The solution to these failures is to link to libcurl3 instead (by build-depending

Bug#786473: r-cran-rcurl: Linking to the NSS library causes failures.

2015-05-21 Thread Charles Plessy
Package: r-cran-rcurl Version: 1.95-4.3-1 Severity: important Hi all, we distribure RCurl linked to libcurl3-nss, but this causes failures with the 'devtools' R package: - https://github.com/hadley/devtools/issues/650 - https://github.com/hadley/devtools/issues/467 -

Bug#786470: debian-policy: [copyright-format] Add an optional “License-Grant” field

2015-05-21 Thread Charles Plessy
. Experiments on new fields are welcome, and it is good to open bugs to track them. But I think that we should first see how the proposed field gets traction before adding it to the specification. Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist

Bug#781518: Please remove very outdated MakeHuman package

2015-05-11 Thread Charles Plessy
Le Mon, May 11, 2015 at 07:22:02PM +0200, Muammar El Khatib a écrit : I have finished to package the new makehuman's upstream version. I am now in the phase of checking copyrights and cleaning lintian warnings. Thanks ! -- Charles -- To UNSUBSCRIBE, email to

Bug#630174: debian-policy: forbid installation into /lib64

2015-05-11 Thread Charles Plessy
Le Mon, May 11, 2015 at 11:30:54AM +0200, Bill Allombert a écrit : We should document that to prevent /lib64 to be used for wrong purpose. In any case I'm not quite sure whether shipping files in lib64 in amd64 packages (juffed/juffed-dev and zynaddsubfx-dssi do this now) is OK. I only

Bug#621050: Document dependencies needed to use multiarch paths

2015-05-08 Thread Charles Plessy
relationship is not needed anymore. Have a nice week-end, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#783195: Exits 0 even if the handler cannot be executed

2015-04-23 Thread Charles Plessy
command's error code (127 in our case) is turned to zero by changing it to int($res/256). I could remove this, but before doing so, I would prefer to understand why it is done like this. Do you have an idea ? If not, I will ask to the original author. Have a nice day, -- Charles Plessy Tsurumi

Bug#769818: Bug#766118: lintian: False positive for “missing-license-paragraph-in-dep5-copyright”

2015-04-18 Thread Charles Plessy
for a different purpose than License fields in Files paragraphs does not change that point. Have a nice week-end, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#781518: Please remove very outdated MakeHuman package

2015-04-01 Thread Charles Plessy
...@lists.debian.org Archive: https://lists.debian.org/55193407.3000...@contuitus.com -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#781518: Please remove very outdated MakeHuman package

2015-04-01 Thread Charles Plessy
of a response, which will result in the final removal of the package. Is that good for you ? Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#781654: copyright-format: IBM CPL - CPL in license short names table

2015-04-01 Thread Charles Plessy
to Mike Milinkovich for spotting this.) Thanks indeed, and have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#741573: Requesting input on TC deliberations about menu system and policy

2015-03-31 Thread Charles Plessy
, or whether it is lagging on real facts by a couple for years or more. Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#780637: cloud-init: needs to be build in the cloud

2015-03-17 Thread Charles Plessy
Le Tue, Mar 17, 2015 at 10:15:38AM +0100, Holger Levsen a écrit : building the cloud-init package fails during package tests because the hostname metadata.google.internal cannot be resolved and cloud specific URLs like http://169.254.169.254/openstack/latest cannot be accessed, see attached

Bug#780637: cloud-init: needs to be build in the cloud

2015-03-17 Thread Charles Plessy
On Dienstag, 17. März 2015, Charles Plessy wrote: it is more complicated than this: the package builds fine with sbuild. Le Tue, Mar 17, 2015 at 12:00:20PM +0100, Holger Levsen a écrit : does it run the tests with sbuild too? (I assume not.) It runs the tests but skips some... which makes

Bug#779676: dep5-copyright-license-name-not-unique check is too strict or too severe.

2015-03-06 Thread Charles Plessy
On Tue, Mar 3, 2015 at 11:13 PM, Charles Plessy ple...@debian.org wrote: I think that the dep5-copyright-license-name-not-unique tag should either: - reduce its severity, as just an advice for readability, or - only be issued when the same short name is used with a different

Bug#779676: dep5-copyright-license-name-not-unique check is too strict or too severe.

2015-03-03 Thread Charles Plessy
should either: - reduce its severity, as just an advice for readability, or - only be issued when the same short name is used with a different description. Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org

Bug#666726: debian-policy: Clarify if empty control fields are ollowed or not

2015-02-13 Thread Charles Plessy
Le Sun, Feb 08, 2015 at 09:52:49AM +0100, Matthias Urlichs a écrit : Charles Plessy: Later, I might propose on debian-devel and debian-dpkg to forbid empty fields in the whole specification (which means, since we are not using empty fields, to guarantee that valid files do

Bug#666726: debian-policy: Clarify if empty control fields are ollowed or not

2015-02-07 Thread Charles Plessy
, by empty I mean: nothing or whitespace only after the colon.) Have a nice week-end, Charles -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#776939: mime-support: please make the build reproducible

2015-02-05 Thread Charles Plessy
Lintian warning, but not uploaded yet because of the Freeze. Thanks anyway for your work on this issue. It is both important and exciting development. Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject

Bug#777090: unblock: bowtie/1.1.1-2

2015-02-04 Thread Charles Plessy
2015-02-03 10:45:22.0 +0900 @@ -1,3 +1,10 @@ +bowtie (1.1.1-2) unstable; urgency=high + + * Team upload. + * Install missing commands. Closes: #776881. + + -- Charles Plessy ple...@debian.org Tue, 03 Feb 2015 10:44:39 +0900 + bowtie (1.1.1-1) unstable; urgency=medium * New upstream

Bug#776557: debian-policy: Please clarify 2.5 'unix heritage = important'

2015-01-29 Thread Charles Plessy
a nice day, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#776203: Please extend LAST_UID 29999 to 59999.

2015-01-25 Thread Charles Plessy
, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#774384: developers-reference: soften advice to justify retirement to debian-private

2015-01-03 Thread Charles Plessy
the Developers Reference is on collab-maint now, and since your proposition was greeted with a large number of appreciations that it reflects Debian's collective vision, I think that you can push your patch. Happy 2015 year ! -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email

Bug#774303: mime-support: norun option prints temp file path

2015-01-03 Thread Charles Plessy
with dashes. » Have a nice Sunday, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#774142: unblock: mime-support/3.58

2014-12-29 Thread Charles Plessy
Package: release.debian.org Severity: normal User: release.debian@packages.debian.org Usertags: unblock Please unblock package mime-support to fix CVE-2014-0666 in Jessie. unblock mime-support/3.58 Have a nice day, and a BIG THANK YOU for your outstanding work. -- Charles Plessy

Bug#774153: wheezy-jessie: systemd-tty-ask-password-agent hung

2014-12-29 Thread Charles Plessy
confirm the bug and its workaround on a Wheezy system that I attempted to upgrade today. Many thanks for your prompt reaction ! -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact

Bug#741573: Two menu systems

2014-12-22 Thread Charles Plessy
on the question that I raised: should Bill's commit reversal be overriden ? Cheers, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#770162: htslib: fai_build_core in faidx.c assumes char is signed

2014-12-14 Thread Charles Plessy
and after the release, for very few benefits. Needless to say, the fixes are welcome in Sid. Have a nice day, Charles -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ

Bug#771949: pv-grub-menu: emits full path even when /boot is on separate partition

2014-12-07 Thread Charles Plessy
Le Sun, Dec 07, 2014 at 08:30:15PM +0100, Samuel Thibault a écrit : Charles Plessy, le Thu 04 Dec 2014 23:08:03 +0900, a écrit : In your system, can't pv-grub-menu be replaced by grub-legacy ? Indeed, that works. Good to know ! Given that maybe grub-legacy will be retired one day, you

Bug#771949: pv-grub-menu: emits full path even when /boot is on separate partition

2014-12-04 Thread Charles Plessy
understand. But please feel free to add some complexity back. Or if you prefer, you can also rewrite it altogether. What we need is a generator for menu.lst, and it does not necessary need to be a fork of grub-legacy. Have a nice day, Charles -- Charles Plessy Tsurumi, Kanagawa, Japan

Bug#769960: Possible problem with nvidia drivers ? (Re: gdm3: upgrade from 3.14.0 to 3.14.1 results in blank screen)

2014-12-04 Thread Charles Plessy
by the autoremovals that came with the purge). Martin, if you have non-free enabled, maybe it is worth trying to purge the non-free nvidia drivers if they are pressent on your machines ? Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ

Bug#671524: Dropping coverage patch in Samtools ?

2014-11-26 Thread Charles Plessy
Le Fri, Jul 27, 2012 at 02:51:13PM +, Debian Bug Tracking System a écrit : Changes: samtools (0.1.18-2) unstable; urgency=low . * added patch to fix segfault in mpileup (Closes: #544976) * added patch to fix coverage cap (Closes: #671524) Hi Dominique and everybody, in recent

Bug#666726: debian-policy: Clarify if empty control fields are ollowed or not

2014-11-23 Thread Charles Plessy
of packages having empty fields in source package control files ? I have not found any. (In the sense that a field that only contains a substitution variable is not considered empty). Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ

Bug#666726: debian-policy: Clarify if empty control fields are ollowed or not

2014-11-23 Thread Charles Plessy
Le Sun, Nov 23, 2014 at 03:08:47PM -0200, Henrique de Moraes Holschuh a écrit : On Mon, 24 Nov 2014, Charles Plessy wrote: do you have examples of packages having empty fields in source package control files ? I have not found any. (In the sense that a field that only contains

Bug#666726: debian-policy: Clarify if empty control fields are ollowed or not

2014-11-23 Thread Charles Plessy
Le Sun, Nov 23, 2014 at 04:14:14PM -0200, Henrique de Moraes Holschuh a écrit : On Mon, 24 Nov 2014, Charles Plessy wrote: Then they are not empty: there is a big difference between Depends: and Depends: ${foo}. I think that it would be very confusing if we would refer them as empty

Bug#666726: debian-policy: Clarify if empty control fields are ollowed or not

2014-11-21 Thread Charles Plessy
people to believe that the above is incorrect. Hi Bill, a quick check where I added Recommends: ${misc:Recommends} and Suggests: to the source control file of the hello package suggests that empty fields are removed by default. Have a nice week-end, -- Charles Plessy Tsurumi, Kanagawa, Japan

Bug#666726: debian-policy: Clarify if empty control fields are ollowed or not

2014-11-20 Thread Charles Plessy
Le Fri, Nov 21, 2014 at 12:23:17AM +0500, Andrey Rahmatullin a écrit : Control: tags -1 + patch On Sat, Aug 04, 2012 at 11:19:15AM +0900, Charles Plessy wrote: How about the attached patch, that adds Its value must not be empty. after The field ends at the end of the line or at the end

Bug#770016: Clarify network access for building packages in main

2014-11-18 Thread Charles Plessy
a patch ? Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#758234: [summary] Re: Bug#758234: transitive dependencies

2014-11-17 Thread Charles Plessy
package maintainers be enough ? - Should the debian-boot and debian-cd mailing lists be notified as well ? - Is a message to debian-devel needed ? Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject

Bug#759260: [summary] Bug#759260: removal of the Extra priority.

2014-11-17 Thread Charles Plessy
, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#759260: [summary] Bug#759260: removal of the Extra priority.

2014-11-17 Thread Charles Plessy
been instrumental for you as a user or a developer, in a way that has no practical alternative ? Or said differently, what would break concretely for you if tomorrow the Optional and Extra priorities were merged ? Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE

Bug#769219: function moved

2014-11-16 Thread Charles Plessy
Le Sun, Nov 16, 2014 at 12:36:05AM +0100, Bill Allombert a écrit : Do you know if there is a org to XML (or SGML) conversion option ? Hi Bill, according to its documentation, Pandoc can do convert Org-Mode to DocBoox Have a nice Sunday, -- Charles -- To UNSUBSCRIBE, email to

Bug#758234: transitive dependencies

2014-11-14 Thread Charles Plessy
of information for a binary package's priority when this package is distributed in the Debian archive. (This would close #616055). Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble

Bug#768292: Let's add the MPLs to /usr/share/common-licenses ? (was Re: Bug#768292: debian-policy: please allow copyright file to refer to license text in separate files)

2014-11-10 Thread Charles Plessy
forget). Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#769050: [Debian-med-packaging] Bug#769050: sra-toolkit should only install binaries, not symlinks to symlinks to binaries

2014-11-10 Thread Charles Plessy
to version 2.4.2-3, maybe you can also make your suggestion in Upstream's tracker ? https://github.com/ncbi/sra-tools Have a nice day, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ

Bug#768292: Let's add the MPLs to /usr/share/common-licenses ? (was Re: Bug#768292: debian-policy: please allow copyright file to refer to license text in separate files)

2014-11-09 Thread Charles Plessy
1146 MPL 2.0 853 SIL OFL 1.0 13 SIL OFL 1.1 567 Total number of packages: 73267 How about adding both MPLs to /usr/share/common-licenses ? Cheers, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi

Bug#768292: debian-policy: please allow copyright file to refer to license text in separate files

2014-11-08 Thread Charles Plessy
and long, which is just a matter of taste. :) Good news. Simon, would it solve your problem if the MPL-2.0 license were added to /usr/share/common-license ? (By the way, for the record, I consider that /usr/share/common-license is not a mark of endorsement anyway). Have a nice day, -- Charles

Bug#768292: debian-policy: please allow copyright file to refer to license text in separate files

2014-11-06 Thread Charles Plessy
was no. But you can have a look at tools/license-count in the Policy's source package, and run it again at lintian.debian.org to see if the situation changed significantly. That would solve your problem with this license. Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan

Bug#758234: it's actively harmful

2014-11-01 Thread Charles Plessy
, and the information of what the transitive priority of a package can be calculated or served in a separate way that does not require changes to the Debian archive. Have a nice Sunday. -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan

Bug#762154: lintian: ignore header's license field for missing-license-paragraph-in-dep5-copyright ?

2014-10-20 Thread Charles Plessy
Le Tue, Oct 21, 2014 at 10:45:49AM +1100, Ben Finney a écrit : On 19-Sep-2014, Charles Plessy wrote: I have a package where the machine-readable copyright file has the following licence field in its header. License: GPL-2 and MIT and GPL-3+ with runtime exception and zlib

Bug#753485: [Debian-med-packaging] Bug#753485: Status of samtools

2014-10-10 Thread Charles Plessy
), but changes from this experimental branch haven't been merged to the main branch yet. Hi Aleksandar and Andreas, I was contacted by one of the upstream developers about getting access to a SPARC porter box, and just asked for it to the DSA. Let's see how it goes. Cheers, Charles -- Charles

Bug#764424: Thanks again ! (Re: Bug#764424 closed by Thomas Goirand z...@debian.org (Bug#764424: fixed in python-requestbuilder 0.2.3-1))

2014-10-08 Thread Charles Plessy
Le Wed, Oct 08, 2014 at 09:27:31AM +, Debian Bug Tracking System a écrit : This is an automatic notification regarding your Bug report which was filed against the python-requestbuilder package: #764424: Please upgrade to version 0.2.3. It has been closed by Thomas Goirand

Bug#764424: Please upgrade to version 0.2.3.

2014-10-07 Thread Charles Plessy
Package: python-requestbuilder Version: 0.2.2-1 Severity: wishlist Good morning Thomas, actually, euca2ools did not work with python-requestbuilder version 0.2.2, and I was told by the upstream author by the upstream author (of both, actually) that this particular version is broken. Can you

Bug#764297: New upstream release needed for euca2ools

2014-10-06 Thread Charles Plessy
Package: python-requestbuilder Version: 0.1.0-1 Severity: wishlist Hi Julien, Thomas, Mehdi and everybody, for updating euca2ools to the latest stable version, I would need python-requestbuilder to be updated to version 0.2 at least. Do you think it would be possible ? Is there a way I can

Bug#764297: Thanks ! (Re: Bug#764297 closed by Thomas Goirand z...@debian.org (Bug#764297: fixed in python-requestbuilder 0.2.2-1))

2014-10-06 Thread Charles Plessy
Le Tue, Oct 07, 2014 at 03:24:09AM +, Debian Bug Tracking System a écrit : This is an automatic notification regarding your Bug report which was filed against the python-requestbuilder package: #764297: New upstream release needed for euca2ools It has been closed by Thomas Goirand

Bug#763563: RM: fitgcp [armel armhf mips mipsel powerpc s390x] -- ROM; unsatisfiable Depends

2014-09-30 Thread Charles Plessy
support, and have a nice day, -- Charles Plessy Debian Med packaging team https://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#763218: [Debian-med-packaging] Bug#763218: python-pysam: FTBFS: Tests failures

2014-09-29 Thread Charles Plessy
before the Freeze, I am removing the tag 'jessie' from this bug. Have a nice day, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe

Bug#726262: Will help packaging

2014-09-23 Thread Charles Plessy
proposition for taking over the package… You are of course very welcome to do so, there is no extra permission to ask for. Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble

Bug#762647: [Debian-med-packaging] Bug#762647: samtools: FTBFS: test suite errors

2014-09-23 Thread Charles Plessy
is likely to be solved in the short term. https://github.com/samtools/samtools/issues/268 Have a nice day, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org

Bug#707338: Bug#707341: upgrade to important, python-uno should go away

2014-09-22 Thread Charles Plessy
Le Mon, Jun 30, 2014 at 09:18:26PM +0200, Karsten Hilbert a écrit : On Sat, Jun 14, 2014 at 10:07:24PM +0200, Rene Engelhard wrote: On Sat, Jun 14, 2014 at 04:23:20PM +0200, Rene Engelhard wrote: still supporting python-uno gives much headache (for example it's build is a big hack and

Bug#762412: ITP: paraclu -- Parametric clustering of genomic and transcriptomic features

2014-09-21 Thread Charles Plessy
Package: wnpp Severity: wishlist Owner: Charles Plessy ple...@debian.org * Package name: paraclu Version : 9 Upstream Author : Martin C. Frith * URL : http://www.cbrc.jp/paraclu/ * License : GPL-3+ Programming Lang: C++ Description : Parametric

Bug#762154: lintian: ignore header's license field for missing-license-paragraph-in-dep5-copyright ?

2014-09-18 Thread Charles Plessy
for these licenses, but this would be a lot of “boilerplate” text in the copyright files… Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#753485: [Debian-med-packaging] Bug#753485: Status of samtools

2014-09-04 Thread Charles Plessy
Le Wed, Sep 03, 2014 at 09:36:02AM +0200, Andreas Tille a écrit : currently we have samtools/0.1.19-1 with bug #753485 tagged patch but are missing a confirmation from upstream for this patch. We also have a new upstream version of samtools (1.0) in experimental (that might or might have

Bug#759746: mime-support: Missing rule for ddeb files

2014-08-30 Thread Charles Plessy
. Have a nice week-end, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#291015: mime-support: run‐mailcap to understand URL notation and start sensible-browser if required.

2014-08-30 Thread Charles Plessy
Dear Eric, do you still have interst for this bug report ? Have a nice week-end, -- Charles Plessy Le Sat, May 03, 2014 at 09:02:28PM +0900, Charles Plessy a écrit : Le Tue, Jan 18, 2005 at 09:56:22AM +0100, Eric Lavarde a écrit : more and more utilities use URL notation to pass around

Bug#759491: Bug#758234: Defining pseudo-essential

2014-08-27 Thread Charles Plessy
better. Thanks. Thanks Russ, I think that this new paragraph is very useful. If need is I second its addition. This addition will cause the current section 3.9 (Maintainer Scripts) to be renumbered 3.10, but I do not expect this to cause big confusions. Have a nice day, Charles -- Charles Plessy

Bug#759186: debian-policy: please consider adding nodoc as a possible value for DEB_BUILD_OPTIONS to policy

2014-08-27 Thread Charles Plessy
that the workding is very good, thanks to you and Johannes. I second it, including minor improvements such as the one proposed by Johannes. Cheers, Charles -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject

Bug#758116: Please be verbose whether you would like to get your Blend promoted by tasksel

2014-08-26 Thread Charles Plessy
that it would be great for Debian Med to have the Blends as first-class citizens in the Debian Installer. While it is not difficult to install the metapackages by hand, I expect that having it as an option in the installer will help convincing people to give it a try. Have a nice day, Charles -- Charles

Bug#759186: debian-policy: please consider adding nodoc as a possible value for DEB_BUILD_OPTIONS to policy

2014-08-26 Thread Charles Plessy
documentation”. Do you or others have modifications to propose ? Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan From 512bca9ac18d8bd4e07eba0b02463369d40420a0 Mon Sep 17 00:00:00 2001 From: Charles Plessy ple...@debian.org Date: Wed, 27 Aug 2014 06:37:41 +0900 Subject: [PATCH] =?UTF-8?q

Bug#759316: Document the use of /etc/default for cron jobs

2014-08-26 Thread Charles Plessy
. Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#758234: Bug#759260: [PATCH] Remove priority extra, make all corresponding packages priority optional

2014-08-26 Thread Charles Plessy
not contribute to an area of Debian's development, I think that we need to be parcimonious in opposition, and keep it only for changes that have a major impact on us. Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ

Bug#759260: Bug#758234: debian-policy: allow packages to depend on packages of lower priority

2014-08-25 Thread Charles Plessy
that at least a notification is sent on debian-devel. However, given the toxic levels of naysaying on this list, it would be too paralysing to require for a formal consensus. Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ

Bug#756780: Status bowtie + tophat (Was: [Help] Need help for architecture specific code)

2014-08-24 Thread Charles Plessy
will want to use Bowtie 2 with TopHat, how about solution 2 ? Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#758910: [pkg-eucalyptus-maintainers] Bug#758910: euca2ools: please update to euca2ools 3.1

2014-08-22 Thread Charles Plessy
/pipermail/pkg-eucalyptus-maintainers/2014-July/001048.html Otherwise, the 3.1.0-1 package is ready for upload. I can upload it to experimental if it helps you. Have a nice week-end, Charles -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ

Bug#758124: Documenting the Testsuite field in the Policy.

2014-08-19 Thread Charles Plessy
Le Thu, Aug 14, 2014 at 09:36:50PM +0900, Charles Plessy a écrit : Here is a patch to update the Policy accordingly. Do you have comments ? On Tue, Aug 19, 2014 at 07:44:19AM +0900, Charles Plessy wrote: Anybody wanting to see the Testsuite field documented in the Policy, please

Bug#758124: Documenting the Testsuite field in the Policy.

2014-08-18 Thread Charles Plessy
Le Thu, Aug 14, 2014 at 09:36:50PM +0900, Charles Plessy a écrit : Package: debian-policy Version: 3.9.5 Severity: wishlist Hi Guillem and everybody, thanks for adding direct support for the Testsuite field in Dpkg. Here is a patch to update the Policy accordingly. Do you have

Bug#758234: debian-policy: allow packages to depend on packages of lower priority

2014-08-16 Thread Charles Plessy
overrides. Patches were submitted in 2003 and 2010. Is there a wording that you find more suitable ? - https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=196367#65 - https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=196367#104 Have a nice week-end, -- Charles Plessy Tsurumi, Kanagawa, Japan

Bug#758124: Documenting the Testsuite field in the Policy.

2014-08-14 Thread Charles Plessy
Package: debian-policy Version: 3.9.5 Severity: wishlist Hi Guillem and everybody, thanks for adding direct support for the Testsuite field in Dpkg. Here is a patch to update the Policy accordingly. Do you have comments ? Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan From

Bug#756754: mime-support: Add support for application/x-xz mime type, ie xz files

2014-08-13 Thread Charles Plessy
Control: tag -1 pending Le Sun, Aug 03, 2014 at 05:34:31PM +0200, Diederik de Haas a écrit : On Saturday 02 August 2014 21:22:11 Charles Plessy wrote: perhaps you can contact (http://tukaani.org/contact.html) the upstream authors and ask them if they would like to submit a media type

Bug#729203: Reintroducing FFmpeg to Debian

2014-08-09 Thread Charles Plessy
/collab-maint/ffmpeg.git Hi Andreas, I searched for license information missing from your debian/copyright and could find only one case, libavutil/x86/x86inc.asm, which is under the ISC license. The debian/copyright file of your package looks comprehensive to me. Have a nice week-end, -- Charles

Bug#757281: [Debian-med-packaging] Bug#757281: dialign-t: FTBFS with clang instead of gcc

2014-08-06 Thread Charles Plessy
debian-med-packag...@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-packaging -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ

Bug#756835: First steps towards source-only uploads

2014-08-05 Thread Charles Plessy
field ? Do you think that modifications are needed ? Would you second it ? https://bugs.debian.org/756835 Have a nice day, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ

Bug#756574: lintian: Please consider removing the tag license-problem-gfdl-non-official-text.

2014-08-03 Thread Charles Plessy
Le Thu, Jul 31, 2014 at 10:59:23AM +0200, Bastien ROUCARIES a écrit : On Thu, Jul 31, 2014 at 4:33 AM, Charles Plessy ple...@debian.org wrote: For one of them, license-problem-gfdl-non-official-text, I have strong doubts if it will ever be useful. In my understanding from the statistics

Bug#756835: First steps towards source-only uploads

2014-08-02 Thread Charles Plessy
, as this value is assumed for paragraphs lacking this field. - Everybody's suggestions are welcome ! Have a nice week-end, and big thank you to Ansgar and the other FTP Masters for the source-only uploads ! -- Charles Plessy Debian

Bug#756754: mime-support: Add support for application/x-xz mime type, ie xz files

2014-08-02 Thread Charles Plessy
to the IANA ? Have a nice week-end, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#756708: mime-support: /usr/bin/edit should point to /etc/alternatives/editor

2014-07-31 Thread Charles Plessy
, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#756721: tracker.debian.org: Please use same font size as in the PTS.

2014-07-31 Thread Charles Plessy
, but can not reach 100 % on one of my eyes. I guess that for many persons the font size is not a problem. Nevertheless, please consider increasing font size and compensating by reducing the vertical intervals between lines. Many thanks again, -- Charles Plessy Tsurumi, Kanagawa, Japan

Bug#756574: lintian: Please consider removing the tag license-problem-gfdl-non-official-text.

2014-07-30 Thread Charles Plessy
no chances to have a significant effect. Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#755886: RM: bedtools [armel] -- ROM; Build-dep unavailable

2014-07-24 Thread Charles Plessy
Package: ftp.debian.org Severity: normal Dear FTP team, please remove bedtools on armel. It build-depends on samtools, which does not build on armel. This problem prevents migration of the latest version of bedtools to Jessie. Have a nice day, -- Charles Plessy Debian Med packaging team

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