Package: sponsorship-requests Severity: wishlist Dear mentors,
I am looking for a sponsor for my package "veryfasttree": * Package name : veryfasttree Version : 4.0-1 Upstream contact : César Pomar <cesaralfredo.pine...@usc.es> * URL : https://github.com/citiususc/veryfasttree * License : MPL-2.0, Custom-License-2, BSD-2-clause, MIT, GPL-3.0, BSL-1.0, Custom-License-3, Custom-License-1 * Vcs : https://github.com/citiususc/veryfasttree Section : science The source builds the following binary packages: veryfasttree - Speeding up the estimation of phylogenetic trees from sequences To access further information about this package, please visit the following URL: https://mentors.debian.net/package/veryfasttree/ Alternatively, you can download the package with 'dget' using this command: dget -x https://mentors.debian.net/debian/pool/main/v/veryfasttree/veryfasttree_4.0-1.dsc Changes for the initial release: veryfasttree (4.0-1) unstable; urgency=low . *Closes: #1038668 *Introduction of new thread levels for improved parallelization. *Enhanced performance through new parallel regions (e.g., ML Lengths, ML splits, LogLk, etc.). *Threads used in tree creation: Top hits, TopHitNJSearch, FastNJSearch, and ExhaustiveNJSearch(-slow). *Implementation of a faster tree partitioning approach with significant speed improvements. *Tree partitioning limited to NNI, SPR, and upProfiles computations for memory conservation. *Parallel tree traversal implemented for remaining parts. *Replacement of disk storage for profiles with Disk Computing. *Shared and reused Top upProfiles among threads for memory efficiency and accelerated sequential parts. *Improved non-deterministic mode with removal of mutex usage. *Optimized performance by parallelizing non-deterministic parts in deterministic mode. *Also implemented non-deterministic parts in deterministic mode for improved performance. *Deterministic mode now outperforms non-deterministic mode in terms of speed. *Tree partitioning method logging now hidden by default. *Support for Fastq format and libBZ2 compression. *Support for reading trees from NEXUS block trees. *Nvidia CUDA GPU computing support. (Experimental) *Introduced parallel compilation. *Incorporation of changes from FastTree-2.11. *Clang Support *Addressed critical errors and implemented substantial corrections. Regards, -- César Pomar
