Bug#487026: ITP: velvet -- Sequence assembler for very short reads

2008-06-19 Thread Charles Plessy
Package: wnpp Severity: wishlist Owner: Charles Plessy [EMAIL PROTECTED] Package name: velvet Version : 0.6.03 Upstream Author : Daniel Zerbino URL : http://www.ebi.ac.uk/~zerbino/velvet/ License : GPL-2+ Programming Lang: C Description : Sequence

Bug#487026: ITP: velvet -- Sequence assembler for very short reads

2008-06-19 Thread Mikhail Gusarov
Twas brillig at 19:01:37 19.06.2008 UTC+09 when [EMAIL PROTECTED] did gyre and gimble: CP Package name: velvet CP Description : Sequence assembler for very short reads Probably this line should mention that this is _genetic_ assembler. -- pgpPU6yNMmcYf.pgp Description: PGP

Bug#487026: ITP: velvet -- Sequence assembler for very short reads

2008-06-19 Thread Andreas Tille
On Thu, 19 Jun 2008, Charles Plessy wrote: A private preliminary package that I made for work is available upon request. Unless somebody asks for fast-tracking, Perhaps you inject your preliminary work in SVN to enable the package be listed as unofficial. I just added it to the debian-med

Bug#487026: ITP: velvet -- Sequence assembler for very short reads

2008-06-19 Thread Charles Plessy
Le Thu, Jun 19, 2008 at 05:12:48PM +0700, Mikhail Gusarov a écrit : Twas brillig at 19:01:37 19.06.2008 UTC+09 when [EMAIL PROTECTED] did gyre and gimble: CP Package name: velvet CP Description : Sequence assembler for very short reads Probably this line should mention that

Bug#487026: ITP: velvet -- Sequence assembler for very short reads

2008-06-19 Thread Mikhail Gusarov
Twas brillig at 00:11:55 20.06.2008 UTC+09 when [EMAIL PROTECTED] did gyre and gimble: Probably this line should mention that this is _genetic_ assembler. CP thank you for the feedback. Actually, the package seems versatile CP enough to assemble transcriptomic as well as as genomic