Hi again,
I pushed a couple of changes on salsa[0] to unlock the situation
with BEDtools integration in bioperl-run. Now the vast majority
of tests are passing. :)
[0] https://salsa.debian.org/med-team/bioperl-run
One of the datasets in use by the bedtools related functions is
not available
Hi Andreas,
I think I'm on a trail with bioperl-run, and could fix a couple
of issues already. I'm however unsure it might make it for the
4th of the advent calendar: fixing the initial issue pulls in
gradually more tests, which in turn may fail to run for all
sorts of reasons.
Kind Regards,
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