Bug#506914: distributed-net: new stable upstream v2.9101-507

Package: distributed-net Version: 2.9015.504-2 Severity: wishlist Please update to the last version (v2.9101-507). Thanks. http://www.distributed.net/download/clients.php 2.9101-507 new: all: Added OGR-NG contest chg: x86: RC5-72 core selection (#4072) fix: x86: AMD CPU

Bug#506981: egoboo : new stable upstream 2.6.8

Package: egoboo Version: 2.22-31 Severity: wishlist Please update to the last version (2.6.8). Thanks. http://egoboo.sourceforge.net/News.htm http://sourceforge.net/project/showfiles.php?group_id=12221package_id=11541 There is a mistake, it does't exist a 2.22 version, in fact is the version

Bug#506981: Changelog

The changelog is available here : http://egoboo.sourceforge.net/forum/viewtopic.php?t=1

Bug#514530: gimp : new stable upstream 2.6.4

Package: gimp Version: 2.6.3-1 Severity: wishlist Please update to the last version (2.6.4). Thanks. http://developer.gimp.org/NEWS-2.6 Overview of Changes from GIMP 2.6.3 to GIMP 2.6.4 = * Bugs fixed: 565223 – Perspective transformation

Bug#520038: wormux : new stable upstream 0.8.3

Package: wormux Version:  1:0.8-2 Severity: wishlist Please update to the last version (0.8.3). Thanks. http://wormux.org/blog/index.php?2009/03/05/58-wormux-083 Here is the changelog: * New skins with new animations * New sounds thanks to Bebelious * Better team menu editor *

Bug#512924: aircrack-ng: new upstream version 1.0 rc2

Package: aircrack-ng Version: 1:1.0~rc1-2 Severity: wishlist Please update to the last version (1.0 rc2). Thanks. http://www.aircrack-ng.org/ Version 1.0-rc2 (changes from aircrack-ng 1.0-rc1) - Released 22 Jan 2009: * aircrack-ng: Added SSE2 supports (WPA cracking speed is improved

Bug#518015: distributed-net: new stable upstream v2.9103-509

Package: distributed-net Version: 2.9101.507-1 Severity: wishlist Please update to the last version (v2.9103-509). Thanks. http://www.distributed.net/download/clients.php 2.9103-509 new: rc5-72: support for requesting larger packets (#3918) new: stream: RC5-72 core for AMD stream

Bug#534214: gimp-gap : new stable upstream 2.6.0

Package: gimp-gap Version:  2.4.0-2 Severity: wishlist Please update to the last version (2.6.0). Thanks. ftp://ftp.gimp.org/pub/gimp/plug-ins/v2.6/gap/ -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact

Bug#868362: transition: libofx7

Package: release.debian.org Severity: normal User: release.debian@packages.debian.org Usertags: transition Dear Release Team, Please schedule a transition for libofx. The 5 reverse build-deps (gnucash, grisbi, homebank, kmymoney, skrooge) currently build fine with the new version. Thanks,

Bug#868362: transition: libofx7

2017-07-15 1:26 GMT+02:00 Emilio Pozuelo Monfort : >> Please schedule a transition for libofx. > > Go ahead. > > Emilio Thanks, uploaded. Best regards, Dylan

Bug#833007: lintian: suggest adding upstream metadata

Hi, Any news for this check? Although some tests related to d/upstream/metadata are disabled due to security issues, it would be very useful to know if the file is missing. The Debian Med project is working to add some ID (RRID, OMICtools, etc) for software related to biomedical research and

Bug#868178: lintian: enable r-data-without-readme-source check also for .RData files

Package: lintian Severity: wishlist Tags: patch Hi, Please find attached a patch that enable r-data-without-readme-source check also for .RData files (with a upper-case D that is found in some R packages [1]). The patch also add reference about the decision from the FTP team. Best regards,

Bug#868462: lintian: obsolete-url-in-packaging doesn't check the Homepage: field

Hi, The Homepage field is checked here: debian/control http://code.google.com/p/autokey/ Best regards, Dylan

Bug#827941:

tags 827941 + patch thanks Hi, Please find attached a patch. Best regards, Dylan From 3f9598162e23edbdbe86f995c6f1ea3caeed98c8 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Dylan=20A=C3=AFssi?= Date: Mon, 3 Jul 2017 23:01:58 +0200 Subject: [PATCH] Add more Lenna ---

Bug#866322: lintian: false positive: r-data-without-readme-source

Hi, It seems that lintian checks for "debian/README.source" in the binary package. So, it cannot find it. Best regards, Dylan

Bug#873463: xserver-xorg-video-openchrome: FTBFS on hurd-i386: iopl undefined

Hi Aaron, Thanks for your bug report. The new version builds a debugging tool that FTBFS on Hurd. I will prepare a new version that disable the building of this tool on Hurd. Best, Dylan

Bug#883121: lintian: Add R CRAN & Bioconductor repositories homepage to the list of known insecure URIs

Package: lintian Version: 2.5.60 Severity: wishlist Tags: patch Hi, Please find attached a patch which add R CRAN & Bioconductor repositories homepages to the list of known insecure URIs for the tag homepage-field-uses-insecure-uri. Best, Dylan From 11d3cdffa24bca1f5d2e5701919146a3b9621f8b Mon

Bug#881900: stretch-pu: package libofx/1:0.9.10-2+deb9u1

Hi Adam, 2017-11-19 23:38 GMT+01:00 Adam D. Barratt : > > Flagged for acceptance. > Thanks. I just opened a similar bug for libofx in Jessie (#882132). Best, Dylan

Bug#882132: jessie-pu: package libofx/1:0.9.10-1+deb8u1

Package: release.debian.org Severity: normal Tags: jessie User: release.debian@packages.debian.org Usertags: pu Dear release team, Upstream has fixed 2 CVE (CVE-2017-2816 and CVE-2017-14731), these 2 CVE are non-dsa. I already backported patches to unstable/testing/stretch (#881900) and now I

Bug#881900: stretch-pu: package libofx/1:0.9.10-2+deb9u1

Hi Adam, 2017-11-18 19:31 GMT+01:00 Adam D. Barratt : > > Please go ahead. > > Adam Thanks, uploaded. Best, Dylan

Bug#881900: stretch-pu: package libofx/1:0.9.10-2+deb9u1

Package: release.debian.org Severity: normal Tags: stretch User: release.debian@packages.debian.org Usertags: pu Dear release team, Upstream has fixed 2 CVE (CVE-2017-2816 and CVE-2017-14731), these 2 CVE are non-dsa. I already backported patches to unstable/testing and now I would like to

Bug#877442: marked as pending

Hi Moritz, 2017-11-14 21:33 GMT+01:00 Moritz Muehlenhoff : > > There's still the possibility to fix this via a stable point update > [1], so I was wondering whether anything of that sort is planned by > you. > Thanks for the hint. Now, it is ongoing [1]. Best, Dylan [1]

Bug#882132: jessie-pu: package libofx/1:0.9.10-1+deb8u1

Hi Adam, 2017-12-02 13:05 GMT+01:00 Adam D. Barratt : > > Please go ahead. > Thanks, uploaded. Best, Dylan

Bug#899401: ITP: r-cran-metamix -- GNU R bayesian mixture analysis for metagenomic community profiling

Package: wnpp Severity: wishlist Owner: Debian R Packages Maintainers Package name: r-cran-metamix URL: https://cran.r-project.org/package=metaMix License: GPL-3 Description: GNU R bayesian mixture analysis for metagenomic community profiling Resolves complex

Bug#899400: ITP: bolt-lmm -- Efficient large cohorts genome-wide Bayesian mixed-model association testing

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: bolt-lmm URL: https://data.broadinstitute.org/alkesgroup/BOLT-LMM/ License: GPL-3+ Description: Efficient large cohorts genome-wide Bayesian mixed-model association

Bug#901871: ITP: photoflare -- Simple but powerful Cross Platform Image Editor

Package: wnpp Severity: wishlist Owner: Dylan Aïssi Package name: photoflare URL: http://photoflare.io/ License: GPL-3+ Description: Simple but powerful Cross Platform Image Editor This is an effort to bring quick, simple but powerful image editing to the masses. PhotoFlare is inspired

Bug#900764: ITP: minimac4 -- Fast Imputation Based on State Space Reduction HMM

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: minimac4 URL: https://genome.sph.umich.edu/wiki/Minimac4 License: GPL-3 Description: Fast Imputation Based on State Space Reduction HMM Minimac4 is a lower memory and more computationally efficient implementation

Bug#900765: ITP: libstatgen -- processing and analyzing next generation sequencing and genotyping data library

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: libstatgen URL: https://genome.sph.umich.edu/wiki/C++_Library:_libStatGen License: GPL-3+ Description: processing and analyzing next generation sequencing and genotyping data library libStatGen is a library for

Bug#900759:

tag 900759 pending thanks Fixed in git.

Bug#858947: Processed: retitle to RFP: plink2 -- whole-genome association analysis toolset

Hi Andreas, 2018-07-02 9:52 GMT+02:00 Andreas Tille : > I wonder whether plink2[1] will simply replace plink1.9 and this > RFP could be closed. Plink2 will not be compatible with plink1 and plink1.9, so for reproducibility and compatibility we need to keep them in Debian. I still plan to package

Bug#902405: RFS: photoflare/1.5.4-1

dget using this command: dget -x https://mentors.debian.net/debian/pool/main/p/photoflare/photoflare_1.5.4-1.dsc Changes since the last upload: * Initial release. (Closes: #901871, LP: #1711644) Regards, Dylan Aïssi

Bug#884379: libjung-java has changed build system

Hi Andreas, I had a look at it and it seems that we need maven-release-plugin which is not yet packaged [1]. If I find time, I will try to package it. Best, Dylan [1] https://bugs.debian.org/573393

Bug#890451: Generate a skeleton of README.source about rda and rdata files

Package: dh-r Severity: wishlist Hi, dh-make-R (and dh-update-R) could generate (and update) a README.source file or at least a skeleton with relevant information for .rda (and *.Rda, *.rdata, *.Rdata, etc.) files, see [2] for more information. Andreas already wrote a shell script [2] to do

Bug#890969: ITP: r-cran-factominer -- Multivariate Exploratory Data Analysis and Data Mining

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: r-cran-factominer URL: https://cran.r-project.org/package=FactoMineR License: GPL-2+ Description: Multivariate Exploratory Data Analysis and Data Mining Exploratory data

Bug#890971: ITP: r-cran-leaps -- Regression Subset Selection

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: r-cran-leaps URL: https://cran.r-project.org/package=leaps License: GPL-2+ Description: Regression Subset Selection Regression subset selection, including exhaustive

Bug#890970: ITP: r-cran-flashclust -- Implementation of optimal hierarchical clustering

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: r-cran-flashclust URL: https://cran.r-project.org/package=flashClust License: GPL-2+ Description: Implementation of optimal hierarchical clustering Fast implementation

Bug#891080: Generate a skeleton of debian/upstream/metadata using upstream inst/CITATION

Package: dh-r Severity: wishlist Hi, dh-make-R (and dh-update-R) could generate (and update) a d/upstream/metadata file or at least a skeleton with relevant information from the upstream inst/CITATION file. Lintian will now emit an (experimental) tag when the metadata file is missing [1].

Bug#815234: lintian: Detect Rdata files with embedded code

Hi Chris, On Tue, 30 Jan 2018 13:33:28 +0530 Chris Lamb wrote: > > > determine if any code is embedded in the file > > So, how does one do this? :) > Not sure but maybe this [1] could be useful here. Best, Dylan [1] http://search.cpan.org/dist/Statistics-R-IO/

Bug#891326: ITP: jheatchart -- Heat map charting library for Java

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: jheatchart URL: http://www.javaheatmap.com/ License: LGPL-3+ Description: Heat map charting library for Java The JHeatChart library provides a simple API for generating

Bug#891231: lintian: Improve r-data-without-readme-source by comparing r-data filenames to README.source contents

Package: lintian Version: 2.5.76 Severity: wishlist Hi, To improve the check r-data-without-readme-source and to avoid unmaintained README.source, lintian could check if the filename of all .RData files from a package are referenced into the README.source. A simple example where it could be

Bug#891476: ITP: r-cran-prettyr -- Pretty Descriptive Stats

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: r-cran-prettyr URL: https://cran.r-project.org/package=prettyR License: GPL-2+ Description: Pretty Descriptive Stats Functions for conventionally formatting descriptive

Bug#904835: ITP: r-cran-ranger -- Fast Implementation of Random Forests

Package: wnpp Severity: wishlist Owner: Debian R Packages Maintainers Package name: r-cran-ranger URL: https://cran.r-project.org/package=ranger License: GPL-3+ Description: Fast Implementation of Random Forests A fast implementation of Random Forests, particularly suited for high dimensional

Bug#905164: ITP: r-cran-reticulate -- R interface to Python modules, classes, and functions

Package: wnpp Severity: wishlist Owner: Debian R Packages Maintainers Package name: r-cran-reticulate URL: https://cran.r-project.org/package=reticulate License: Apache-2.0 Description: R interface to Python modules, classes, and functions Interface to Python modules, classes, and functions.

Bug#904985: lintian: Check for R packages wrongly set Architecture to any instead all

Package: lintian Version: 2.5.94 Severity: wishlist Hi, A common mistake in R packaging is to set Architecture to any instead all [1]. Only R packages with "NeedsCompilation: yes" in their DESCRIPTION files (Debian Control File format) must be marked any [1]. So, all R packages (r-cran- or

Bug#903728: ITP: python-colormath -- Abstracts common color math operations

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: python-colormath URL: https://pypi.org/project/colormath/ License: BSD-3-clause Description: Abstracts common color math operations python-colormath is a simple Python module that spares the user from directly

Bug#903730: ITP: python-spectra -- Easy color scales and color conversion

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: python-spectra URL: https://pypi.org/project/spectra/ License: Expat Description: Easy color scales and color conversion for Python Spectra is a Python library that makes color math, color scales, and color-space

Bug#903732: ITP: python-lzstring -- LZ-based compression algorithm

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: python-lzstring URL: https://pypi.org/project/lzstring/ License: Expat Description: LZ-based compression algorithm for Python python-lzstring is a simple Python module that compression data using LZ-based

Bug#892284: ITP: ChromHMM -- Chromatin state discovery and characterization

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: chromhmm URL: http://compbio.mit.edu/ChromHMM/ License: GPL-3+ Description: Chromatin state discovery and characterization ChromHMM is software for learning and

Bug#879248: r-cran-nmf: detecting number of cores

Hi Michael, 2018-03-12 8:44 GMT+01:00 Michael Cree : > How about the attached patch? Should detection of number of cores > fail it sets the number of cores to be one. With this patch > r-cran-nmf builds successfully on Alpha. Thanks for this patch. But, I think if we really

Bug#891808: ITP: r-bioc-impute -- Imputation for microarray data

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: r-bioc-impute URL: https://bioconductor.org/packages/impute/ License: GPL-2 Description: Imputation for microarray data R package which provide a function to perform

Bug#892481: r-cran-testthat: autopkgtest failure

Hi Graham, On Fri, 9 Mar 2018 15:24:45 +0200 Graham Inggs wrote: > > By changing the locale from C to C.UTF-8, similar to what I did in > r-cran-urltools [3], there is only one test failure remaining: Thanks. Done. > > > test_check("testthat") > ── 1. Error: returns local

Bug#879248:

Hi Andreas, 2018-03-09 10:40 GMT+01:00 Andreas Tille : > > How did you guessed the version number 0.23.4? There are no release > tags on Github - at least I can not find any? Somehow issue #106 is > mentioning removal from CRAN so may be we can expect some properly > versioned

Bug#879248:

It seems to be fixed in 0.23.4 but not yet on CRAN. https://github.com/renozao/NMF/commit/6996bce01e

Bug#896142: ITP: ChromImpute -- Large-scale systematic epigenome imputation

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: chromimpute URL: http://www.biolchem.ucla.edu/labs/ernst/ChromImpute/ License: GPL-2 Description: Large-scale systematic epigenome imputation ChromImpute is software for

Bug#882555: r-cran-ddalpha: FTBFS on m68k: no boost::math::Rlog1p

Hi Aaron, On Thu, 23 Nov 2017 16:54:33 -0500 "Aaron M. Ucko" wrote: > The build of r-cran-ddalpha for m68k (admittedly not a release > architecture) failed: > > g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG > -I"/usr/lib/R/site-library/Rcpp/include"-fpic -g -O2 >

Bug#887680: r-cran-git2r: FTBFS on m68k: missing value where TRUE/FALSE needed

Hi Aaron, On Thu, 18 Jan 2018 21:05:31 -0500 "Aaron M. Ucko" wrote: > The build of r-cran-git2r for m68k (admittedly not a release > architecture) failed: > > Error in if (nc[currentIndex] == 0L) upperBlockIndex <- c(upperBlockIndex, > : > missing value where TRUE/FALSE

Bug#887682: r-cran-utf8: FTBFS on m68k: missing value where TRUE/FALSE needed

Hi Aaron, On Thu, 18 Jan 2018 21:33:47 -0500 "Aaron M. Ucko" wrote: > The build of r-cran-utf8 for m68k (admittedly not a release > architecture) failed: > > Error in if (any(i)) x[i] <- paste0(x[i], "\n", indentString) : > missing value where TRUE/FALSE needed > ERROR:

Bug#894747: lintian: Re-enable YAML parsing for d/upstream/metadata files

Package: lintian Version: 2.5.80 Severity: wishlist Control: block 731340 by -1 Hi, Currently, the lintian checks for validity of d/u/metadata are disabled since 2.5.50.4 [1] due to a security problem [2] (CVE-2017-8829), but now we can safety use YAML::XS with the $LoadBlessed option [3]. I

Bug#893827: ITP: bioSyntax -- Syntax highlighting for computational biology

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: biosyntax URL: https://biosyntax.org/ License: GPL-3 Description: Syntax Highlighting for Computational Biology (gedit) Syntax highlighting for computational biology to

Bug#892038: ITP: r-cran-ggsci -- Scientific Journal and Sci-Fi Themed Color Palettes

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team X-Debbugs-Cc: debia...@lists.debian.org Package name: r-cran-ggsci URL: https://cran.r-project.org/package=ggsci License: GPL-3 Description: Scientific Journal and Sci-Fi Themed Color

Bug#892039: ITP: r-cran-bigmemory -- Manage Massive Matrices with Shared Memory and Memory-Mapped Files

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team X-Debbugs-Cc: debia...@lists.debian.org Package name: r-cran-bigmemory URL: https://cran.r-project.org/package=bigmemory License: LGPL-3 or Apache-2 Description: Manage Massive

Bug#892040: ITP: r-cran-bigmemory.sri -- A shared resource interface for Bigmemory Project packages

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team X-Debbugs-Cc: debia...@lists.debian.org Package name: r-cran-bigmemory.sri URL: https://cran.r-project.org/package=bigmemory.sri License: LGPL-3 or Apache-2 Description: A shared

Bug#660165: Source package names for R libraries (and others)

Hi Chris, 2018-02-26 15:24 GMT+01:00 Chris Lamb : > Again, not sure what this has to do with tests or the reference to > "recommendation" :) (Did you reply to the right bug here?) Yes :-) , I tried to give an example (ok a bad one) how to have the same source and binary names

Bug#891231: lintian: Improve r-data-without-readme-source by comparing r-data filenames to README.source contents

Hi Chris, 2018-02-23 17:22 GMT+01:00 Chris Lamb : >> To improve the check r-data-without-readme-source and to avoid unmaintained >> README.source, lintian could check if the filename of all .RData files from >> a package are referenced into the README.source. > > Good idea! > >>

Bug#660165:

Hi, Just my two cents, all Debian R packages without r-*** source package name don't profit of the R autodep8 tests. So, increase the application of this "recommendation" will also increase number of automatic tested R packages. Best, Dylan

Bug#891734: ITP: r-cran-gee -- Generalized Estimation Equation Solver

Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: r-cran-gee URL: https://cran.r-project.org/package=gee License: GPL-2 Description: Generalized Estimation Equation Solver R package which provide a function to solve a

Bug#911809: ITP: r-cran-ini -- Read and Write '.ini' Files

Package: wnpp Owner: Dylan Aïssi Severity: wishlist * Package name: r-cran-ini Version : 0.3.1 Upstream Author : David Valentim Dias * URL : https://cran.r-project.org/package=ini * License : GPL-3 Programming Lang: GNU R Description : Read and Write

Bug#912177: ITP: r-cran-rcmdcheck -- Run 'R CMD check' from 'R' and Capture Results

Package: wnpp Owner: Dylan Aïssi Severity: wishlist * Package name: r-cran-rcmdcheck Version : 1.3.0 Upstream Author : Mango Solutions, Gábor Csárdi, RStudio * URL : https://cran.r-project.org/package=rcmdcheck * License : MIT Programming Lang: GNU R

Bug#912158: ITP: r-cran-remotes -- R Package Installation from Remote Repositories

Package: wnpp Owner: Dylan Aïssi Severity: wishlist * Package name: r-cran-remotes Version : 2.0.1 Upstream Author : Gábor Csárdi, * URL : https://cran.r-project.org/package=remotes * License : GPL-2+ Programming Lang: GNU R Description : R Package

Bug#912138: ITP: r-cran-sessioninfo -- R Session Information

Package: wnpp Owner: Dylan Aïssi Severity: wishlist * Package name: r-cran-sessioninfo Version : 1.1.0 Upstream Author : Gábor Csárdi, R core, Hadley Wickham, Winston Chang, Robert M Flight, Kirill Müller, Jim Hester * URL : https://cran.r-project.org/package

Bug#912534: ITP: r-cran-selectr -- Translate CSS Selectors to XPath Expressions

Package: wnpp Owner: Dylan Aïssi Severity: wishlist * Package name: r-cran-selectr Version : 0.4 Upstream Author : Simon Potter, Simon Sapin, Ian Bicking * URL : https://cran.r-project.org/package=selectr * License : BSD-3-clause Programming Lang: GNU R

Bug#911982: ITP: r-cran-clisymbols -- Unicode Symbols at the R Prompt

Package: wnpp Owner: Dylan Aïssi Severity: wishlist * Package name: r-cran-clisymbols Version : 1.2.0 Upstream Author : Gábor Csárdi, Sindre Sorhus * URL : https://cran.r-project.org/package=clisymbols * License : MIT Programming Lang: GNU R Description

Bug#911984: ITP: r-cran-xopen -- Open System Files, 'URLs', Anything

Package: wnpp Owner: Dylan Aïssi Severity: wishlist * Package name: r-cran-xopen Version : 1.0.0 Upstream Author : Gábor Csárdi * URL : https://cran.r-project.org/package=xopen * License : MIT Programming Lang: GNU R Description : Open System Files

Bug#911989: ITP: r-cran-usethis -- Automate Package and Project Setup

Package: wnpp Owner: Dylan Aïssi Severity: wishlist * Package name: r-cran-usethis Version : 1.4.0 Upstream Author : Hadley Wickham, Jennifer Bryan, RStudio * URL : https://cran.r-project.org/package=usethis * License : GPL-3 Programming Lang: GNU R

Bug#912716: ITP: r-cran-reprex -- Prepare Reproducible Example Code via the Clipboard

Package: wnpp Owner: Dylan Aïssi Severity: wishlist * Package name: r-cran-reprex Version : 0.2.1 Upstream Author : Jennifer Bryan, Jim Hester, David Robinson, Hadley Wickham, RStudio * URL : https://cran.r-project.org/package=reprex * License : MIT

Bug#912728: ITP: r-cran-tidyverse -- Easily Install and Load the 'Tidyverse'

Package: wnpp Owner: Dylan Aïssi Severity: wishlist * Package name: r-cran-tidyverse Version : 1.2.1 Upstream Author : Hadley Wickham, RStudio * URL : https://cran.r-project.org/package=tidyverse * License : GPL-3 Programming Lang: GNU R Description

Bug#912741: ITP: r-cran-biocmanager -- Access the Bioconductor Project Package Repository

Package: wnpp Owner: Dylan Aïssi Severity: wishlist * Package name: r-cran-biocmanager Version : 1.30.3 Upstream Author : Martin Morgan, Marcel Ramos * URL : https://cran.r-project.org/package=BiocManager * License : Artistic-2.0 Programming Lang: GNU R

Bug#912609: ITP: r-cran-rvest -- Easily Harvest (Scrape) Web Pages

Package: wnpp Owner: Dylan Aïssi Severity: wishlist * Package name: r-cran-rvest Version : 0.3.2 Upstream Author : Hadley Wickham, RStudio * URL : https://cran.r-project.org/package=rvest * License : GPL-3 Programming Lang: GNU R Description : Easily

Bug#911914: ITP: r-cran-clipr -- Read and Write from the System Clipboard

Package: wnpp Owner: Dylan Aïssi Severity: wishlist * Package name: r-cran-clipr Version : 0.4.1 Upstream Author : Matthew Lincoln, * URL : https://cran.r-project.org/package=clipr * License : GPL-3 Programming Lang: GNU R Description : Read and Write

Bug#911913: ITP: r-cran-gh -- Minimal client to access the 'GitHub' 'API'

Package: wnpp Owner: Dylan Aïssi Severity: wishlist * Package name: r-cran-gh Version : 1.0.1 Upstream Author : Gábor Csárdi * URL : https://cran.r-project.org/package=gh * License : MIT Programming Lang: GNU R Description : Minimal client to access

Bug#913305: [R-pkg-team] Bug#913305: r-bioc-s4vectors breaks multiple autopkgtests

Hi, Le ven. 9 nov. 2018 à 16:45, Graham Inggs a écrit : > > Hi > > On 2018/11/09 16:40, Paul Gevers wrote: > > If the answer to my question above is "those packages are broken", then > > my next question is, if it is somehow possible to let the package > > dependency framework know that this is

Bug#910351: New version available on CRAN, need to rename this package

Package: r-other-hms-dbmi-spp Version: 1.15.2-1 Severity: wishlist https://cran.r-project.org/package=spp

Bug#909334: ITP: openrazer -- OpenRazer peripheral drivers

Package: wnpp Severity: wishlist Owner: Dylan Aïssi Package name: openrazer URL: https://openrazer.github.io/ License: GPL-2+ Description: OpenRazer peripheral drivers OpenRazer is a collection of GNU/Linux drivers for the Razer devices. Supported devices include keyboards, mice, mouse-mats

Bug#889582: Update libmtp package in Debian (new upstream releases)

Hi Alessio, The last libmtp version packaged in Debian is quite old (2017-04), 3 new versions were released since. Do you intend to update the Debian package before the freeze? If you don't have time, I can help you to update the package. Best, Dylan

Bug#889582: Update libmtp package in Debian (new upstream releases)

Hi Alessio, Le lun. 21 janv. 2019 à 02:23, Alessio Treglia a écrit : > On Fri, 18 Jan 2019 at 16:39, Dylan Aïssi wrote: > > If you don't have time, I can help you to update the package. > > Please go ahead. Thanks :-) Last questions: - Should I do a NMU or co-maint is fine f

Bug#884379: Trying to upgrade libjung-free-java

Hi Andreas, Le mar. 8 janv. 2019 à 15:22, Andreas Tille a écrit : > I try to upgrade libjung-free-java[1]. The upstream build system has been completely rewrite and now it seems to use maven-release which is not packaged in Debian (RFP: #573393). So, I tried to package maven-release but

Bug#884379: Trying to upgrade libjung-free-java

Le mer. 23 janv. 2019 à 09:55, Andreas Tille a écrit : > > Did you published your attempt somewhere (suggested is > salsa:java-team/maven-release)? > Trying to remember what I did 1 year ago. I did not push my attempt because it was very embryonic and I was not able to deal with all the java

Bug#916333: ITP: dav1d -- fast and small AV1 video stream decoder

Package: wnpp Owner: Debian Multimedia Maintainers Severity: wishlist Package name: dav1d Version: 0.1.0 Upstream Author: VideoLan URL: https://code.videolan.org/videolan/dav1d License: BSD-2-clause Description: fast and small AV1 video stream decoder dav1d is an AOMedia Video 1 (AV1)

Bug#914731:

Hi Graham, Another R package autopkgtest (r-cran-metamix) fails with this error: > libmpi.so: cannot open shared object file: No such file or directory This seems to be induced by one of them dependency: r-cran-rmpi which is not loadable in R. Maybe a new occurrence of #861748 [1] ? [1]

Bug#914731:

Hummm, it worked on my own autopkgtest instance. I will investigate it again.

Bug#915376: ITP: r-bioc-zlibbioc -- (Virtual) zlibbioc Bioconductor package

Package: wnpp Owner: Dylan Aïssi Severity: wishlist Package name: r-bioc-zlibbioc Version: 1.28.0 Upstream Author: Martin Morgan URL: https://bioconductor.org/packages/zlibbioc/ License: Artistic-2.0 Programming Lang: GNU R Description: (Virtual) zlibbioc Bioconductor package zlibbioc provides

Bug#891080:

tag 891080 pending thanks There is now a script for that: https://salsa.debian.org/r-pkg-team/dh-r/blob/master/scripts/convert_citation2metadata

Bug#915717: Some bioconductor packages FTBFS because of missing 'git_branch' field

Package: dh-r Version: 20181123 Severity: important Some bioconductor packages (r-bioc-genomeinfodbdata and r-bioc-go.db) FTBFS because of missing 'git_branch' field in the DESCRIPTION file. This need to be clarified with upstream. But, at the same time, we can relax the requirement of this field

Bug#914445: ITP: fastp -- Ultra-fast all-in-one FASTQ preprocessor

Package: wnpp Owner: Debian Med Packaging Team Severity: wishlist Package name: fastp Version: 0.19.5 Upstream Author : Shifu Chen URL: https://github.com/OpenGene/fastp License: MIT Description: Ultra-fast all-in-one FASTQ preprocessor All-in-one FASTQ preprocessor, fastp provides functions

Bug#913305: [R-pkg-team] Bug#913305: r-bioc-s4vectors breaks multiple autopkgtests

Hi, Le lun. 12 nov. 2018 à 13:25, Andreas Tille a écrit : > > On Mon, Nov 12, 2018 at 11:07:36AM +0100, Dylan Aďssi wrote: > > > > As it's not recommended mixing BioC packages from different BioC > > releases, maybe we can introduce (for next BioC release?) a mechanism > > similar to the virtual

Bug#926259: ITP: optimir -- Integrating genetic variations in miRNA alignment

Package: wnpp Owner: Debian Med Packaging Team Severity: wishlist Package name: optimir Upstream Author : Florian Thibord URL: https://github.com/FlorianThibord/OptimiR License: GPL-3 Description: Integrating genetic variations in miRNA alignment OptimiR is a miRSeq data alignment workflow. It

Bug#921559:

Control: severity -1 important Hi, I tried to reproduce this problem with an up-to-date (2019-04-01) live Buster. And I was not able to reproduce this problem with all my Android devices (Nexus 5, Nexus 7, Galaxy S3, Galaxy J5 2018 and Galaxy Tab A 2018). So, I reduce the severity of this bug

Bug#925348: Backport r-cran-sys >= 3.1 to Buster

Package: r-cran-sys Severity: wishlist To not forget the Jeroen's request (upstream dev) to backport a new version of r-cran-sys (>= 3.1) in Buster.

Bug#925347: Backport r-cran-openssl >= 1.3.0 to Buster

Package: r-cran-openssl Severity: wishlist To not forget the Jeroen's request (upstream dev) to backport a new version of r-cran-openssl (>= 1.3.0) in Buster. > The main reason I want to upgrade r-cran-openssl is > that I found out that `ssh-keygen` on Buster now defaults to storing > ssh keys

Bug#926506: stretch-pu: package bwa/0.7.15-2+deb9u1

Package: release.debian.org Severity: normal Tags: stretch User: release.debian@packages.debian.org Usertags: pu Dear release team, Upstream has fixed CVE-2019-10269 which is non-dsa. I have already backported a patch to unstable/testing and now I would like to fix the Stretch version. Please

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