Source: elastix Version: 4.8-12 Severity: serious Tags: buster sid User: debian...@lists.debian.org Usertags: qa-ftbfs-20170805 qa-ftbfs Justification: FTBFS on amd64
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Common/MevisDicomTiff && > /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/ITKIOFactoryRegistration > -I/usr/include/hdf5/serial -I/usr/include/dcmtk/dcmseg > -I/usr/include/dcmtk/dcmfg -I/usr/include/dcmtk/dcmiod > -I/usr/include/dcmtk/dcmrt -I/usr/include/dcmtk/dcmpstat > -I/usr/include/dcmtk/dcmqrdb -I/usr/include/dcmtk/dcmwlm > -I/usr/include/dcmtk/dcmsign -I/usr/include/dcmtk/dcmsr > -I/usr/include/dcmtk/dcmnet -I/usr/include/dcmtk/dcmtls > -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/dcmjpeg > -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle > -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/oflog > -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/config > -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.6 > -I/usr/include/double-conversion -isystem /usr/include/ITK-4.10 > -I/<<PKGBUILDDIR>>/src/Common -I/<<PKGBUILDDIR>>/src/Common/CostFunctions > -I/<<PKGBUILDDIR>>/src/Common/CUDA > -I/<<PKGBUILDDIR>>/src/Common/ImageSamplers -I/<<PKGBUILDDIR>>/src/Common/KNN > -I/<<PKGBUILDDIR>>/src/Common/KNN/ann_1.1/include > -I/<<PKGBUILDDIR>>/src/Common/LineSearchOptimizers > -I/<<PKGBUILDDIR>>/src/Common/ParameterFileParser > -I/<<PKGBUILDDIR>>/src/Common/Transforms -I/<<PKGBUILDDIR>>/src/Common/xout > -I/<<PKGBUILDDIR>>/src/Common/MevisDicomTiff -I/<<PKGBUILDDIR>>/src/Core > -I/<<PKGBUILDDIR>>/src/Core/Install -I/<<PKGBUILDDIR>>/src/Core/Kernel > -I/<<PKGBUILDDIR>>/src/Core/ComponentBaseClasses > -I/<<PKGBUILDDIR>>/src/Core/Configuration -I/<<PKGBUILDDIR>>/src/Core/Main > -I/<<PKGBUILDDIR>>/src/Components/FixedImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/ImageSamplers > -I/<<PKGBUILDDIR>>/src/Components/Interpolators > -I/<<PKGBUILDDIR>>/src/Components/Metrics > -I/<<PKGBUILDDIR>>/src/Components/MovingImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/Optimizers > -I/<<PKGBUILDDIR>>/src/Components/Registrations > -I/<<PKGBUILDDIR>>/src/Components/ResampleInterpolators > -I/<<PKGBUILDDIR>>/src/Components/Resamplers > -I/<<PKGBUILDDIR>>/src/Components/Transforms > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -g -O2 > -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat > -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 > -fopenmp -O3 -DNDEBUG -o > CMakeFiles/mevisdcmtiff.dir/itkUseMevisDicomTiff.cxx.o -c > /<<PKGBUILDDIR>>/src/Common/MevisDicomTiff/itkUseMevisDicomTiff.cxx > [ 12%] Linking CXX static library ../../bin/libmevisdcmtiff.a > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Common/MevisDicomTiff && > /usr/bin/cmake -P CMakeFiles/mevisdcmtiff.dir/cmake_clean_target.cmake > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Common/MevisDicomTiff && > /usr/bin/cmake -E cmake_link_script CMakeFiles/mevisdcmtiff.dir/link.txt > --verbose=1 > /usr/bin/ar qc ../../bin/libmevisdcmtiff.a > CMakeFiles/mevisdcmtiff.dir/itkUseMevisDicomTiff.cxx.o > /usr/bin/ranlib ../../bin/libmevisdcmtiff.a > make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu' > [ 12%] Built target mevisdcmtiff > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from /usr/include/ITK-4.10/itkOptimizer.h:21, > from /usr/include/ITK-4.10/itkNonLinearOptimizer.h:21, > from > /usr/include/ITK-4.10/itkSingleValuedNonLinearOptimizer.h:21, > from > /<<PKGBUILDDIR>>/src/Common/itkScaledSingleValuedNonLinearOptimizer.h:21, > from > /<<PKGBUILDDIR>>/src/Common/itkScaledSingleValuedNonLinearOptimizer.cxx:22: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from > /<<PKGBUILDDIR>>/src/Common/ParameterFileParser/itkParameterFileParser.h:22, > from > /<<PKGBUILDDIR>>/src/Common/ParameterFileParser/itkParameterFileParser.cxx:22: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > [ 13%] Building CXX object > Common/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/kd_util.cpp.o > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Common/KNN/ann_1.1 && /usr/bin/c++ > -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/ITKIOFactoryRegistration > -I/usr/include/hdf5/serial -I/usr/include/dcmtk/dcmseg > -I/usr/include/dcmtk/dcmfg -I/usr/include/dcmtk/dcmiod > -I/usr/include/dcmtk/dcmrt -I/usr/include/dcmtk/dcmpstat > -I/usr/include/dcmtk/dcmqrdb -I/usr/include/dcmtk/dcmwlm > -I/usr/include/dcmtk/dcmsign -I/usr/include/dcmtk/dcmsr > -I/usr/include/dcmtk/dcmnet -I/usr/include/dcmtk/dcmtls > -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/dcmjpeg > -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle > -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/oflog > -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/config > -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.6 > -I/usr/include/double-conversion -I/usr/include/ITK-4.10 > -I/<<PKGBUILDDIR>>/src/Common -I/<<PKGBUILDDIR>>/src/Common/CostFunctions > -I/<<PKGBUILDDIR>>/src/Common/CUDA > -I/<<PKGBUILDDIR>>/src/Common/ImageSamplers -I/<<PKGBUILDDIR>>/src/Common/KNN > -I/<<PKGBUILDDIR>>/src/Common/KNN/ann_1.1/include > -I/<<PKGBUILDDIR>>/src/Common/LineSearchOptimizers > -I/<<PKGBUILDDIR>>/src/Common/ParameterFileParser > -I/<<PKGBUILDDIR>>/src/Common/Transforms -I/<<PKGBUILDDIR>>/src/Common/xout > -I/<<PKGBUILDDIR>>/src/Common/MevisDicomTiff -I/<<PKGBUILDDIR>>/src/Core > -I/<<PKGBUILDDIR>>/src/Core/Install -I/<<PKGBUILDDIR>>/src/Core/Kernel > -I/<<PKGBUILDDIR>>/src/Core/ComponentBaseClasses > -I/<<PKGBUILDDIR>>/src/Core/Configuration -I/<<PKGBUILDDIR>>/src/Core/Main > -I/<<PKGBUILDDIR>>/src/Components/FixedImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/ImageSamplers > -I/<<PKGBUILDDIR>>/src/Components/Interpolators > -I/<<PKGBUILDDIR>>/src/Components/Metrics > -I/<<PKGBUILDDIR>>/src/Components/MovingImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/Optimizers > -I/<<PKGBUILDDIR>>/src/Components/Registrations > -I/<<PKGBUILDDIR>>/src/Components/ResampleInterpolators > -I/<<PKGBUILDDIR>>/src/Components/Resamplers > -I/<<PKGBUILDDIR>>/src/Components/Transforms > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu > -I/<<PKGBUILDDIR>>/src/Common/KNN/ann_1.1/src -g -O2 > -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat > -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 > -fopenmp -O3 -DNDEBUG -o CMakeFiles/ANNlib.dir/src/kd_util.cpp.o -c > /<<PKGBUILDDIR>>/src/Common/KNN/ann_1.1/src/kd_util.cpp > [ 14%] Linking CXX static library ../../bin/libxoutlib.a > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Common/xout && /usr/bin/cmake -P > CMakeFiles/xoutlib.dir/cmake_clean_target.cmake > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Common/xout && /usr/bin/cmake -E > cmake_link_script CMakeFiles/xoutlib.dir/link.txt --verbose=1 > /usr/bin/ar qc ../../bin/libxoutlib.a CMakeFiles/xoutlib.dir/xoutmain.cxx.o > /usr/bin/ranlib ../../bin/libxoutlib.a > make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu' > [ 14%] Built target xoutlib > [ 14%] Building CXX object > Common/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/perf.cpp.o > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Common/KNN/ann_1.1 && /usr/bin/c++ > -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/ITKIOFactoryRegistration > -I/usr/include/hdf5/serial -I/usr/include/dcmtk/dcmseg > -I/usr/include/dcmtk/dcmfg -I/usr/include/dcmtk/dcmiod > -I/usr/include/dcmtk/dcmrt -I/usr/include/dcmtk/dcmpstat > -I/usr/include/dcmtk/dcmqrdb -I/usr/include/dcmtk/dcmwlm > -I/usr/include/dcmtk/dcmsign -I/usr/include/dcmtk/dcmsr > -I/usr/include/dcmtk/dcmnet -I/usr/include/dcmtk/dcmtls > -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/dcmjpeg > -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle > -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/oflog > -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/config > -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.6 > -I/usr/include/double-conversion -I/usr/include/ITK-4.10 > -I/<<PKGBUILDDIR>>/src/Common -I/<<PKGBUILDDIR>>/src/Common/CostFunctions > -I/<<PKGBUILDDIR>>/src/Common/CUDA > -I/<<PKGBUILDDIR>>/src/Common/ImageSamplers -I/<<PKGBUILDDIR>>/src/Common/KNN > -I/<<PKGBUILDDIR>>/src/Common/KNN/ann_1.1/include > -I/<<PKGBUILDDIR>>/src/Common/LineSearchOptimizers > -I/<<PKGBUILDDIR>>/src/Common/ParameterFileParser > -I/<<PKGBUILDDIR>>/src/Common/Transforms -I/<<PKGBUILDDIR>>/src/Common/xout > -I/<<PKGBUILDDIR>>/src/Common/MevisDicomTiff -I/<<PKGBUILDDIR>>/src/Core > -I/<<PKGBUILDDIR>>/src/Core/Install -I/<<PKGBUILDDIR>>/src/Core/Kernel > -I/<<PKGBUILDDIR>>/src/Core/ComponentBaseClasses > -I/<<PKGBUILDDIR>>/src/Core/Configuration -I/<<PKGBUILDDIR>>/src/Core/Main > -I/<<PKGBUILDDIR>>/src/Components/FixedImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/ImageSamplers > -I/<<PKGBUILDDIR>>/src/Components/Interpolators > -I/<<PKGBUILDDIR>>/src/Components/Metrics > -I/<<PKGBUILDDIR>>/src/Components/MovingImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/Optimizers > -I/<<PKGBUILDDIR>>/src/Components/Registrations > -I/<<PKGBUILDDIR>>/src/Components/ResampleInterpolators > -I/<<PKGBUILDDIR>>/src/Components/Resamplers > -I/<<PKGBUILDDIR>>/src/Components/Transforms > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu > -I/<<PKGBUILDDIR>>/src/Common/KNN/ann_1.1/src -g -O2 > -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat > -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 > -fopenmp -O3 -DNDEBUG -o CMakeFiles/ANNlib.dir/src/perf.cpp.o -c > /<<PKGBUILDDIR>>/src/Common/KNN/ann_1.1/src/perf.cpp > [ 15%] Building CXX object > Common/CMakeFiles/elxCommon.dir/CostFunctions/itkScaledSingleValuedCostFunction.cxx.o > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Common && /usr/bin/c++ > -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/ITKIOFactoryRegistration > -I/usr/include/hdf5/serial -I/usr/include/dcmtk/dcmseg > -I/usr/include/dcmtk/dcmfg -I/usr/include/dcmtk/dcmiod > -I/usr/include/dcmtk/dcmrt -I/usr/include/dcmtk/dcmpstat > -I/usr/include/dcmtk/dcmqrdb -I/usr/include/dcmtk/dcmwlm > -I/usr/include/dcmtk/dcmsign -I/usr/include/dcmtk/dcmsr > -I/usr/include/dcmtk/dcmnet -I/usr/include/dcmtk/dcmtls > -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/dcmjpeg > -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle > -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/oflog > -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/config > -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.6 > -I/usr/include/double-conversion -isystem /usr/include/ITK-4.10 > -I/<<PKGBUILDDIR>>/src/Common -I/<<PKGBUILDDIR>>/src/Common/CostFunctions > -I/<<PKGBUILDDIR>>/src/Common/CUDA > -I/<<PKGBUILDDIR>>/src/Common/ImageSamplers -I/<<PKGBUILDDIR>>/src/Common/KNN > -I/<<PKGBUILDDIR>>/src/Common/KNN/ann_1.1/include > -I/<<PKGBUILDDIR>>/src/Common/LineSearchOptimizers > -I/<<PKGBUILDDIR>>/src/Common/ParameterFileParser > -I/<<PKGBUILDDIR>>/src/Common/Transforms -I/<<PKGBUILDDIR>>/src/Common/xout > -I/<<PKGBUILDDIR>>/src/Common/MevisDicomTiff -I/<<PKGBUILDDIR>>/src/Core > -I/<<PKGBUILDDIR>>/src/Core/Install -I/<<PKGBUILDDIR>>/src/Core/Kernel > -I/<<PKGBUILDDIR>>/src/Core/ComponentBaseClasses > -I/<<PKGBUILDDIR>>/src/Core/Configuration -I/<<PKGBUILDDIR>>/src/Core/Main > -I/<<PKGBUILDDIR>>/src/Components/FixedImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/ImageSamplers > -I/<<PKGBUILDDIR>>/src/Components/Interpolators > -I/<<PKGBUILDDIR>>/src/Components/Metrics > -I/<<PKGBUILDDIR>>/src/Components/MovingImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/Optimizers > -I/<<PKGBUILDDIR>>/src/Components/Registrations > -I/<<PKGBUILDDIR>>/src/Components/ResampleInterpolators > -I/<<PKGBUILDDIR>>/src/Components/Resamplers > -I/<<PKGBUILDDIR>>/src/Components/Transforms > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -g -O2 > -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat > -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 > -fopenmp -O3 -DNDEBUG -o > CMakeFiles/elxCommon.dir/CostFunctions/itkScaledSingleValuedCostFunction.cxx.o > -c > /<<PKGBUILDDIR>>/src/Common/CostFunctions/itkScaledSingleValuedCostFunction.cxx > [ 16%] Building CXX object > Common/ParameterFileParser/CMakeFiles/param.dir/itkParameterMapInterface.cxx.o > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Common/ParameterFileParser && > /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/ITKIOFactoryRegistration > -I/usr/include/hdf5/serial -I/usr/include/dcmtk/dcmseg > -I/usr/include/dcmtk/dcmfg -I/usr/include/dcmtk/dcmiod > -I/usr/include/dcmtk/dcmrt -I/usr/include/dcmtk/dcmpstat > -I/usr/include/dcmtk/dcmqrdb -I/usr/include/dcmtk/dcmwlm > -I/usr/include/dcmtk/dcmsign -I/usr/include/dcmtk/dcmsr > -I/usr/include/dcmtk/dcmnet -I/usr/include/dcmtk/dcmtls > -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/dcmjpeg > -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle > -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/oflog > -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/config > -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.6 > -I/usr/include/double-conversion -isystem /usr/include/ITK-4.10 > -I/<<PKGBUILDDIR>>/src/Common -I/<<PKGBUILDDIR>>/src/Common/CostFunctions > -I/<<PKGBUILDDIR>>/src/Common/CUDA > -I/<<PKGBUILDDIR>>/src/Common/ImageSamplers -I/<<PKGBUILDDIR>>/src/Common/KNN > -I/<<PKGBUILDDIR>>/src/Common/KNN/ann_1.1/include > -I/<<PKGBUILDDIR>>/src/Common/LineSearchOptimizers > -I/<<PKGBUILDDIR>>/src/Common/ParameterFileParser > -I/<<PKGBUILDDIR>>/src/Common/Transforms -I/<<PKGBUILDDIR>>/src/Common/xout > -I/<<PKGBUILDDIR>>/src/Common/MevisDicomTiff -I/<<PKGBUILDDIR>>/src/Core > -I/<<PKGBUILDDIR>>/src/Core/Install -I/<<PKGBUILDDIR>>/src/Core/Kernel > -I/<<PKGBUILDDIR>>/src/Core/ComponentBaseClasses > -I/<<PKGBUILDDIR>>/src/Core/Configuration -I/<<PKGBUILDDIR>>/src/Core/Main > -I/<<PKGBUILDDIR>>/src/Components/FixedImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/ImageSamplers > -I/<<PKGBUILDDIR>>/src/Components/Interpolators > -I/<<PKGBUILDDIR>>/src/Components/Metrics > -I/<<PKGBUILDDIR>>/src/Components/MovingImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/Optimizers > -I/<<PKGBUILDDIR>>/src/Components/Registrations > -I/<<PKGBUILDDIR>>/src/Components/ResampleInterpolators > -I/<<PKGBUILDDIR>>/src/Components/Resamplers > -I/<<PKGBUILDDIR>>/src/Components/Transforms > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -g -O2 > -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat > -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 > -fopenmp -O3 -DNDEBUG -o > CMakeFiles/param.dir/itkParameterMapInterface.cxx.o -c > /<<PKGBUILDDIR>>/src/Common/ParameterFileParser/itkParameterMapInterface.cxx > [ 17%] Building CXX object > Common/CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkMoreThuenteLineSearchOptimizer.cxx.o > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Common && /usr/bin/c++ > -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/ITKIOFactoryRegistration > -I/usr/include/hdf5/serial -I/usr/include/dcmtk/dcmseg > -I/usr/include/dcmtk/dcmfg -I/usr/include/dcmtk/dcmiod > -I/usr/include/dcmtk/dcmrt -I/usr/include/dcmtk/dcmpstat > -I/usr/include/dcmtk/dcmqrdb -I/usr/include/dcmtk/dcmwlm > -I/usr/include/dcmtk/dcmsign -I/usr/include/dcmtk/dcmsr > -I/usr/include/dcmtk/dcmnet -I/usr/include/dcmtk/dcmtls > -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/dcmjpeg > -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle > -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/oflog > -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/config > -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.6 > -I/usr/include/double-conversion -isystem /usr/include/ITK-4.10 > -I/<<PKGBUILDDIR>>/src/Common -I/<<PKGBUILDDIR>>/src/Common/CostFunctions > -I/<<PKGBUILDDIR>>/src/Common/CUDA > -I/<<PKGBUILDDIR>>/src/Common/ImageSamplers -I/<<PKGBUILDDIR>>/src/Common/KNN > -I/<<PKGBUILDDIR>>/src/Common/KNN/ann_1.1/include > -I/<<PKGBUILDDIR>>/src/Common/LineSearchOptimizers > -I/<<PKGBUILDDIR>>/src/Common/ParameterFileParser > -I/<<PKGBUILDDIR>>/src/Common/Transforms -I/<<PKGBUILDDIR>>/src/Common/xout > -I/<<PKGBUILDDIR>>/src/Common/MevisDicomTiff -I/<<PKGBUILDDIR>>/src/Core > -I/<<PKGBUILDDIR>>/src/Core/Install -I/<<PKGBUILDDIR>>/src/Core/Kernel > -I/<<PKGBUILDDIR>>/src/Core/ComponentBaseClasses > -I/<<PKGBUILDDIR>>/src/Core/Configuration -I/<<PKGBUILDDIR>>/src/Core/Main > -I/<<PKGBUILDDIR>>/src/Components/FixedImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/ImageSamplers > -I/<<PKGBUILDDIR>>/src/Components/Interpolators > -I/<<PKGBUILDDIR>>/src/Components/Metrics > -I/<<PKGBUILDDIR>>/src/Components/MovingImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/Optimizers > -I/<<PKGBUILDDIR>>/src/Components/Registrations > -I/<<PKGBUILDDIR>>/src/Components/ResampleInterpolators > -I/<<PKGBUILDDIR>>/src/Components/Resamplers > -I/<<PKGBUILDDIR>>/src/Components/Transforms > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -g -O2 > -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat > -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 > -fopenmp -O3 -DNDEBUG -o > CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkMoreThuenteLineSearchOptimizer.cxx.o > -c > /<<PKGBUILDDIR>>/src/Common/LineSearchOptimizers/itkMoreThuenteLineSearchOptimizer.cxx > [ 17%] Building CXX object > Common/CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkLineSearchOptimizer.cxx.o > cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/Common && /usr/bin/c++ > -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/ITKIOFactoryRegistration > -I/usr/include/hdf5/serial -I/usr/include/dcmtk/dcmseg > -I/usr/include/dcmtk/dcmfg -I/usr/include/dcmtk/dcmiod > -I/usr/include/dcmtk/dcmrt -I/usr/include/dcmtk/dcmpstat > -I/usr/include/dcmtk/dcmqrdb -I/usr/include/dcmtk/dcmwlm > -I/usr/include/dcmtk/dcmsign -I/usr/include/dcmtk/dcmsr > -I/usr/include/dcmtk/dcmnet -I/usr/include/dcmtk/dcmtls > -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/dcmjpeg > -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle > -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/oflog > -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/config > -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.6 > -I/usr/include/double-conversion -isystem /usr/include/ITK-4.10 > -I/<<PKGBUILDDIR>>/src/Common -I/<<PKGBUILDDIR>>/src/Common/CostFunctions > -I/<<PKGBUILDDIR>>/src/Common/CUDA > -I/<<PKGBUILDDIR>>/src/Common/ImageSamplers -I/<<PKGBUILDDIR>>/src/Common/KNN > -I/<<PKGBUILDDIR>>/src/Common/KNN/ann_1.1/include > -I/<<PKGBUILDDIR>>/src/Common/LineSearchOptimizers > -I/<<PKGBUILDDIR>>/src/Common/ParameterFileParser > -I/<<PKGBUILDDIR>>/src/Common/Transforms -I/<<PKGBUILDDIR>>/src/Common/xout > -I/<<PKGBUILDDIR>>/src/Common/MevisDicomTiff -I/<<PKGBUILDDIR>>/src/Core > -I/<<PKGBUILDDIR>>/src/Core/Install -I/<<PKGBUILDDIR>>/src/Core/Kernel > -I/<<PKGBUILDDIR>>/src/Core/ComponentBaseClasses > -I/<<PKGBUILDDIR>>/src/Core/Configuration -I/<<PKGBUILDDIR>>/src/Core/Main > -I/<<PKGBUILDDIR>>/src/Components/FixedImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/ImageSamplers > -I/<<PKGBUILDDIR>>/src/Components/Interpolators > -I/<<PKGBUILDDIR>>/src/Components/Metrics > -I/<<PKGBUILDDIR>>/src/Components/MovingImagePyramids > -I/<<PKGBUILDDIR>>/src/Components/Optimizers > -I/<<PKGBUILDDIR>>/src/Components/Registrations > -I/<<PKGBUILDDIR>>/src/Components/ResampleInterpolators > -I/<<PKGBUILDDIR>>/src/Components/Resamplers > -I/<<PKGBUILDDIR>>/src/Components/Transforms > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -g -O2 > -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat > -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 > -fopenmp -O3 -DNDEBUG -o > CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkLineSearchOptimizer.cxx.o -c > /<<PKGBUILDDIR>>/src/Common/LineSearchOptimizers/itkLineSearchOptimizer.cxx > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from /usr/include/ITK-4.10/itkCostFunction.h:21, > from /usr/include/ITK-4.10/itkSingleValuedCostFunction.h:21, > from > /<<PKGBUILDDIR>>/src/Common/CostFunctions/itkScaledSingleValuedCostFunction.h:22, > from > /<<PKGBUILDDIR>>/src/Common/CostFunctions/itkScaledSingleValuedCostFunction.cxx:22: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from > /<<PKGBUILDDIR>>/src/Common/ParameterFileParser/itkParameterMapInterface.h:22, > from > /<<PKGBUILDDIR>>/src/Common/ParameterFileParser/itkParameterMapInterface.cxx:19: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from /usr/include/ITK-4.10/itkOptimizer.h:21, > from /usr/include/ITK-4.10/itkNonLinearOptimizer.h:21, > from > /usr/include/ITK-4.10/itkSingleValuedNonLinearOptimizer.h:21, > from > /<<PKGBUILDDIR>>/src/Common/LineSearchOptimizers/itkLineSearchOptimizer.h:22, > from > /<<PKGBUILDDIR>>/src/Common/LineSearchOptimizers/itkMoreThuenteLineSearchOptimizer.h:22, > from > /<<PKGBUILDDIR>>/src/Common/LineSearchOptimizers/itkMoreThuenteLineSearchOptimizer.cxx:22: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > Common/CMakeFiles/elxCommon.dir/build.make:65: recipe for target > 'Common/CMakeFiles/elxCommon.dir/itkScaledSingleValuedNonLinearOptimizer.cxx.o' > failed > make[3]: *** > [Common/CMakeFiles/elxCommon.dir/itkScaledSingleValuedNonLinearOptimizer.cxx.o] > Error 1 The full build log is available from: http://aws-logs.debian.net/2017/08/05/elastix_4.8-12_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures.
