Hi again,
the issue is most probably caused by a broken fasta parser. With the
following simplification of the header
$ git diff
diff --git a/debian/tests/test_data/Acartia_tonsa.fasta
b/debian/tests/test_data/Acartia_tonsa.fasta
index abcda65..011076b 100644
---
Hi,
since upstream claimed to have fixed a bug unrelated to this test case I
meanwhile uploaded kraken 1.1. To simplify fixing the issue here is the
output of the autopkgtest script on a local machine:
$ sh /usr/share/doc/kraken/run-unit-test
scan_fasta_file.pl: unable to determine taxonomy ID
Hi,
On Sun, Feb 04, 2018 at 08:13:48PM -0800, Steve Langasek wrote:
> Since the upload of kraken 1.0-1, the autopkgtests for this package
> have been consistently failing in both Debian and Ubuntu.
I confirm that the test is failing. I commited version 1.1 of kraken to
Git and it keeps on
Source: kraken
Version: 1.0-1
Severity: important
User: ubuntu-de...@lists.ubuntu.com
Usertags: origin-ubuntu bionic autopkgtest
Dear Andreas,
Since the upload of kraken 1.0-1, the autopkgtests for this package
have been consistently failing in both Debian and Ubuntu. While the test
failure is
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