On Wed, 6 Feb 2019 at 14:06, Andreas Tille wrote:
> On Wed, Feb 06, 2019 at 01:18:26PM +, Carnė Draug wrote:
> > I guess the fix for this is to have in bioperl's d/control:
> >
> > Breaks: libbio-perl-run-perl (<< 1.7.3)
> >
> > It would be nice if upstream did a new release of
Control: retitle -1 Bioperl 1.7.4 should not migrate to Buster
On Wed, Feb 06, 2019 at 03:36:39PM +0100, Andreas Beckmann wrote:
> Don't forget to re-upload bioperl afterwards with appropriate
> Breaks+Replaces added to libbio-perl-perl.
Thanks for the hint. However, we simply use this bug as a
Control: severity -1 serious
On Wed, 6 Feb 2019 14:58:09 +0100 Andreas Tille wrote:
> This is what I've though about: Removing the files from bioperl-run
> (which would be 1.7.2-5 then)
Don't forget to re-upload bioperl afterwards with appropriate
Breaks+Replaces added to libbio-perl-perl.
Hi Carnë,
On Wed, Feb 06, 2019 at 01:18:26PM +, Carnë Draug wrote:
> This is by design and is mentioned on the release Changes file:
>
> * The following modules are new in the BioPerl distribution. They
> have been previously released in the BioPerl-Run distribution.
> This
On Wed, 6 Feb 2019 at 10:57, Andreas Tille wrote:
>
> Control: tags -1 help
>
> Hi David,
>
> as far as I know you are involved into bioperl and might be the most
> competent person for this problem. I've found the following competing
> filed in bioperl and bioperl-run:
>
>
> bioperl-run(master)
Control: tags -1 help
Hi David,
as far as I know you are involved into bioperl and might be the most
competent person for this problem. I've found the following competing
filed in bioperl and bioperl-run:
bioperl-run(master) $ find . -name "Analysis.pm" -o -name "AnalysisFactory.pm"
Package: libbio-perl-perl
Version: 1.7.2-3
Severity: normal
Dear Maintainer,
The package can’t be upgraded because one of its files
(/usr/share/man/man3/Bio::Tools::Run::Analysis.3pm.gz) conflicts with libbio-
perl-run-perl.
-- System Information:
Debian Release: buster/sid
APT prefers
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