Bug#951280: fixed in ncbi-blast+ 2.9.0-4
"Aaron M. Ucko" writes: > Andreas Tille writes: > >> Uploaded to buster-backports, Andreas. > > Great, thanks! I've requested permission for a non-backport update: https://bugs.debian.org/952414 -- Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org) http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
Bug#951280: fixed in ncbi-blast+ 2.9.0-4
Andreas Tille writes: > Uploaded to buster-backports, Andreas. Great, thanks! -- Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org) http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
Bug#951280: fixed in ncbi-blast+ 2.9.0-4
On Thu, Feb 20, 2020 at 10:35:48PM -0500, Aaron M. Ucko wrote: > Andreas Tille writes: > > > Cool. Please ping me if its in testing. > > It is; please go ahead with the upload to backports. Uploaded to buster-backports, Andreas. -- http://fam-tille.de
Bug#951280: fixed in ncbi-blast+ 2.9.0-4
Andreas Tille writes: > Cool. Please ping me if its in testing. It is; please go ahead with the upload to backports. Thanks! -- Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org) http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
Bug#951280: fixed in ncbi-blast+ 2.9.0-4
On Wed, Feb 19, 2020 at 10:01:57AM -0500, Aaron M. Ucko wrote: > At the moment, a mipsel toolchain error is blocking > migration; I'll see what I can do about that. Cool. Please ping me if its in testing. > > PS: I'd be happy if you could answer Tony Travis on the Debian > > Med list and explain the current status. > > Done a little while ago. Thanks a lot, Andreas. -- http://fam-tille.de
Bug#951280: fixed in ncbi-blast+ 2.9.0-4
Andreas Tille writes: > Feel free to ping me once the package is in testing an a backport > is possible. I have permissions to do backports and I'd volunteer > to upload if you have no such permissions. That would be helpful, thanks; I'm not sure I ever obtained such permissions. At the moment, a mipsel toolchain error is blocking migration; I'll see what I can do about that. > Thank you for your work on this No problem. > PS: I'd be happy if you could answer Tony Travis on the Debian > Med list and explain the current status. Done a little while ago. -- Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org) http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?a...@monk.mit.edu
Bug#951280: fixed in ncbi-blast+ 2.9.0-4
On Wed, Feb 19, 2020 at 08:35:44AM -0500, Aaron M. Ucko wrote: > Glad to hear it! All the same, I will try to make the fix available > more widely when I get a chance. Feel free to ping me once the package is in testing an a backport is possible. I have permissions to do backports and I'd volunteer to upload if you have no such permissions. Thank you for your work on this Andreas. PS: I'd be happy if you could answer Tony Travis on the Debian Med list and explain the current status. > -- Aaron > > Patrice Duroux writes: > > > A release inbuster-backports would be fine for me. > > Whatever it is ok now that I have rebuilt it from source applying the same > > change in the debian/rules file. Finally it is working. -- http://fam-tille.de
Bug#951280: fixed in ncbi-blast+ 2.9.0-4
Glad to hear it! All the same, I will try to make the fix available more widely when I get a chance. -- Aaron Patrice Duroux writes: > A release inbuster-backports would be fine for me. > Whatever it is ok now that I have rebuilt it from source applying the same > change in the debian/rules file. Finally it is working. > > Thanks again, > Patrice > > On Mon, 17 Feb 2020 20:46:32 -0500 u...@debian.org (Aaron M. Ucko) wrote: >> That's a fair request. From a technical perspective, it should be >> straightforward (the same change should work there), but I'll need to >> get official approval from the Release Team. There's also a version of >> ncbi-blast+ in buster-backports that I should be able to fix more >> readily, but I can understand if you'd rather leave backports alone. >> >> Thanks for asking, and sorry you ran into trouble here. >> >> -- Aaron >> >> Patrice Duroux writes: >> >> > Hi, >> > >> > Thanks for the work. >> > But is there any plan to solve it for ncbi-blast+ in Buster for which the > bug >> > report was addressed initially? >> > Do I have to mix Buster / Sid on my system? >> > >> > Thanks, >> > Patrice >> > >> > On Mon, 17 Feb 2020 01:50:53 + Debian FTP Masters < >> > ftpmas...@ftp-master.debian.org> wrote: >> >> Source: ncbi-blast+ >> >> Source-Version: 2.9.0-4 >> >> Done: u...@debian.org (Aaron M. Ucko) >> >> >> >> We believe that the bug you reported is fixed in the latest version of >> >> ncbi-blast+, which is due to be installed in the Debian FTP archive. >> >> >> >> A summary of the changes between this version and the previous one is >> >> attached. >> >> >> >> Thank you for reporting the bug, which will now be closed. If you >> >> have further comments please address them to 951...@bugs.debian.org, >> >> and the maintainer will reopen the bug report if appropriate. >> >> >> >> Debian distribution maintenance software >> >> pp. >> >> Aaron M. Ucko (supplier of updated ncbi-blast+ package) >> >> >> >> (This message was generated automatically at their request; if you >> >> believe that there is a problem with it please contact the archive >> >> administrators by mailing ftpmas...@ftp-master.debian.org) >> >> >> >> >> >> -BEGIN PGP SIGNED MESSAGE- >> >> Hash: SHA256 >> >> >> >> Format: 1.8 >> >> Date: Sun, 16 Feb 2020 20:16:33 -0500 >> >> Source: ncbi-blast+ >> >> Architecture: source >> >> Version: 2.9.0-4 >> >> Distribution: unstable >> >> Urgency: high >> >> Maintainer: Debian Med Packaging Team < >> > debian-med-packag...@lists.alioth.debian.org> >> >> Changed-By: Aaron M. Ucko
Bug#951280: fixed in ncbi-blast+ 2.9.0-4
A release inbuster-backports would be fine for me. Whatever it is ok now that I have rebuilt it from source applying the same change in the debian/rules file. Finally it is working. Thanks again, Patrice On Mon, 17 Feb 2020 20:46:32 -0500 u...@debian.org (Aaron M. Ucko) wrote: > That's a fair request. From a technical perspective, it should be > straightforward (the same change should work there), but I'll need to > get official approval from the Release Team. There's also a version of > ncbi-blast+ in buster-backports that I should be able to fix more > readily, but I can understand if you'd rather leave backports alone. > > Thanks for asking, and sorry you ran into trouble here. > > -- Aaron > > Patrice Duroux writes: > > > Hi, > > > > Thanks for the work. > > But is there any plan to solve it for ncbi-blast+ in Buster for which the bug > > report was addressed initially? > > Do I have to mix Buster / Sid on my system? > > > > Thanks, > > Patrice > > > > On Mon, 17 Feb 2020 01:50:53 + Debian FTP Masters < > > ftpmas...@ftp-master.debian.org> wrote: > >> Source: ncbi-blast+ > >> Source-Version: 2.9.0-4 > >> Done: u...@debian.org (Aaron M. Ucko) > >> > >> We believe that the bug you reported is fixed in the latest version of > >> ncbi-blast+, which is due to be installed in the Debian FTP archive. > >> > >> A summary of the changes between this version and the previous one is > >> attached. > >> > >> Thank you for reporting the bug, which will now be closed. If you > >> have further comments please address them to 951...@bugs.debian.org, > >> and the maintainer will reopen the bug report if appropriate. > >> > >> Debian distribution maintenance software > >> pp. > >> Aaron M. Ucko (supplier of updated ncbi-blast+ package) > >> > >> (This message was generated automatically at their request; if you > >> believe that there is a problem with it please contact the archive > >> administrators by mailing ftpmas...@ftp-master.debian.org) > >> > >> > >> -BEGIN PGP SIGNED MESSAGE- > >> Hash: SHA256 > >> > >> Format: 1.8 > >> Date: Sun, 16 Feb 2020 20:16:33 -0500 > >> Source: ncbi-blast+ > >> Architecture: source > >> Version: 2.9.0-4 > >> Distribution: unstable > >> Urgency: high > >> Maintainer: Debian Med Packaging Team < > > debian-med-packag...@lists.alioth.debian.org> > >> Changed-By: Aaron M. Ucko
Bug#951280: fixed in ncbi-blast+ 2.9.0-4
That's a fair request. From a technical perspective, it should be straightforward (the same change should work there), but I'll need to get official approval from the Release Team. There's also a version of ncbi-blast+ in buster-backports that I should be able to fix more readily, but I can understand if you'd rather leave backports alone. Thanks for asking, and sorry you ran into trouble here. -- Aaron Patrice Duroux writes: > Hi, > > Thanks for the work. > But is there any plan to solve it for ncbi-blast+ in Buster for which the bug > report was addressed initially? > Do I have to mix Buster / Sid on my system? > > Thanks, > Patrice > > On Mon, 17 Feb 2020 01:50:53 + Debian FTP Masters < > ftpmas...@ftp-master.debian.org> wrote: >> Source: ncbi-blast+ >> Source-Version: 2.9.0-4 >> Done: u...@debian.org (Aaron M. Ucko) >> >> We believe that the bug you reported is fixed in the latest version of >> ncbi-blast+, which is due to be installed in the Debian FTP archive. >> >> A summary of the changes between this version and the previous one is >> attached. >> >> Thank you for reporting the bug, which will now be closed. If you >> have further comments please address them to 951...@bugs.debian.org, >> and the maintainer will reopen the bug report if appropriate. >> >> Debian distribution maintenance software >> pp. >> Aaron M. Ucko (supplier of updated ncbi-blast+ package) >> >> (This message was generated automatically at their request; if you >> believe that there is a problem with it please contact the archive >> administrators by mailing ftpmas...@ftp-master.debian.org) >> >> >> -BEGIN PGP SIGNED MESSAGE- >> Hash: SHA256 >> >> Format: 1.8 >> Date: Sun, 16 Feb 2020 20:16:33 -0500 >> Source: ncbi-blast+ >> Architecture: source >> Version: 2.9.0-4 >> Distribution: unstable >> Urgency: high >> Maintainer: Debian Med Packaging Team < > debian-med-packag...@lists.alioth.debian.org> >> Changed-By: Aaron M. Ucko >> Closes: 951280 >> Changes: >> ncbi-blast+ (2.9.0-4) unstable; urgency=high >> . >>* debian/control: Standards-Version: 4.5.0 (already compliant). >>* debian/rules: DEB_CONFIGURE_COMMON_FLAGS += --without-sse42. >> (Closes: #951280.) >> Checksums-Sha1: >> 7427fdad6764091bcad72a436a1e8122ba980844 2297 ncbi-blast+_2.9.0-4.dsc >> 54c7ff368b62216dc64943e3f9173690338e8001 29112 ncbi-blast+_2.9.0- > 4.debian.tar.xz >> 86c672c0d92dcd99fe73faaf13d1a355d152f84c 8853 ncbi-blast+_2.9.0- > 4_source.buildinfo >> Checksums-Sha256: >> 26b9aa389bc41b8b570b3883374828f085244f66615ffa3ced38f64033dcfa04 2297 ncbi- > blast+_2.9.0-4.dsc >> dc79f19dea2d581ba12957d7aa70d20accd83e50eacdc484e5d668f4e5c0c7b0 29112 ncbi- > blast+_2.9.0-4.debian.tar.xz >> e2ea23323bad1095a5902aa169ba477fa2b9d3908b0d4bb51fd5faa296c2bbf4 8853 ncbi- > blast+_2.9.0-4_source.buildinfo >> Files: >> 4db70f8ccc3c830edb570aef31da120f 2297 science optional ncbi-blast+_2.9.0- > 4.dsc >> 216a8b45f29c2419924a6f214bef27f0 29112 science optional ncbi-blast+_2.9.0- > 4.debian.tar.xz >> 5cf07deee0d0c1fa2f82b28099550fb8 8853 science optional ncbi-blast+_2.9.0- > 4_source.buildinfo >> >> -BEGIN PGP SIGNATURE- >> >> iQIzBAEBCAAdFiEEfDq5z9IwvTDdAJxZHnCRsfFKZKIFAl5J6eoACgkQHnCRsfFK >> ZKJ++A/+Ppu1Y69CUK3za3XrrgT+nHT3oZeinrdaysAXJNAITp3snwKJm6PgTdaM >> 1YakzLrZtZ2pWvQ2qRMcvAnyGbM4mg6+7uia4SIRN+OwBji3nFX4NpRfVXQyQQ0N
Bug#951280: fixed in ncbi-blast+ 2.9.0-4
Hi, Thanks for the work. But is there any plan to solve it for ncbi-blast+ in Buster for which the bug report was addressed initially? Do I have to mix Buster / Sid on my system? Thanks, Patrice On Mon, 17 Feb 2020 01:50:53 + Debian FTP Masters < ftpmas...@ftp-master.debian.org> wrote: > Source: ncbi-blast+ > Source-Version: 2.9.0-4 > Done: u...@debian.org (Aaron M. Ucko) > > We believe that the bug you reported is fixed in the latest version of > ncbi-blast+, which is due to be installed in the Debian FTP archive. > > A summary of the changes between this version and the previous one is > attached. > > Thank you for reporting the bug, which will now be closed. If you > have further comments please address them to 951...@bugs.debian.org, > and the maintainer will reopen the bug report if appropriate. > > Debian distribution maintenance software > pp. > Aaron M. Ucko (supplier of updated ncbi-blast+ package) > > (This message was generated automatically at their request; if you > believe that there is a problem with it please contact the archive > administrators by mailing ftpmas...@ftp-master.debian.org) > > > -BEGIN PGP SIGNED MESSAGE- > Hash: SHA256 > > Format: 1.8 > Date: Sun, 16 Feb 2020 20:16:33 -0500 > Source: ncbi-blast+ > Architecture: source > Version: 2.9.0-4 > Distribution: unstable > Urgency: high > Maintainer: Debian Med Packaging Team < debian-med-packag...@lists.alioth.debian.org> > Changed-By: Aaron M. Ucko > Closes: 951280 > Changes: > ncbi-blast+ (2.9.0-4) unstable; urgency=high > . >* debian/control: Standards-Version: 4.5.0 (already compliant). >* debian/rules: DEB_CONFIGURE_COMMON_FLAGS += --without-sse42. > (Closes: #951280.) > Checksums-Sha1: > 7427fdad6764091bcad72a436a1e8122ba980844 2297 ncbi-blast+_2.9.0-4.dsc > 54c7ff368b62216dc64943e3f9173690338e8001 29112 ncbi-blast+_2.9.0- 4.debian.tar.xz > 86c672c0d92dcd99fe73faaf13d1a355d152f84c 8853 ncbi-blast+_2.9.0- 4_source.buildinfo > Checksums-Sha256: > 26b9aa389bc41b8b570b3883374828f085244f66615ffa3ced38f64033dcfa04 2297 ncbi- blast+_2.9.0-4.dsc > dc79f19dea2d581ba12957d7aa70d20accd83e50eacdc484e5d668f4e5c0c7b0 29112 ncbi- blast+_2.9.0-4.debian.tar.xz > e2ea23323bad1095a5902aa169ba477fa2b9d3908b0d4bb51fd5faa296c2bbf4 8853 ncbi- blast+_2.9.0-4_source.buildinfo > Files: > 4db70f8ccc3c830edb570aef31da120f 2297 science optional ncbi-blast+_2.9.0- 4.dsc > 216a8b45f29c2419924a6f214bef27f0 29112 science optional ncbi-blast+_2.9.0- 4.debian.tar.xz > 5cf07deee0d0c1fa2f82b28099550fb8 8853 science optional ncbi-blast+_2.9.0- 4_source.buildinfo > > -BEGIN PGP SIGNATURE- > > iQIzBAEBCAAdFiEEfDq5z9IwvTDdAJxZHnCRsfFKZKIFAl5J6eoACgkQHnCRsfFK > ZKJ++A/+Ppu1Y69CUK3za3XrrgT+nHT3oZeinrdaysAXJNAITp3snwKJm6PgTdaM > 1YakzLrZtZ2pWvQ2qRMcvAnyGbM4mg6+7uia4SIRN+OwBji3nFX4NpRfVXQyQQ0N
