Your message dated Fri, 03 Dec 2021 16:49:05 +0000
with message-id <e1mtbk9-000cqf...@fasolo.debian.org>
and subject line Bug#1000423: fixed in python-biom-format 2.1.10-3
has caused the Debian Bug report #1000423,
regarding python-biom-format: FTBFS with Python 3.10 - Test failures
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1000423: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1000423
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: python-biom-format
Version: 2.1.10-2
Severity: serious
Tags: upstream
Justification: FTBFS
Block -1 with 1000422
python-biom-format FTBFS with Python 3.10:
=========================== short test summary info ============================
ERROR biom/tests/test_err.py
ERROR biom/tests/test_parse.py
ERROR biom/tests/test_table.py
ERROR biom/tests/test_util.py
ERROR biom/tests/test_cli/test_add_metadata.py
ERROR biom/tests/test_cli/test_show_install_info.py
ERROR biom/tests/test_cli/test_subset_table.py
ERROR biom/tests/test_cli/test_summarize_table.py
ERROR biom/tests/test_cli/test_table_converter.py
ERROR biom/tests/test_cli/test_table_normalizer.py
ERROR biom/tests/test_cli/test_uc_processor.py
ERROR biom/tests/test_cli/test_validate_table.py
!!!!!!!!!!!!!!!!!!! Interrupted: 12 errors during collection !!!!!!!!!!!!!!!!!!!
============================== 12 errors in 2.27s ==============================
E: pybuild pybuild:354: test: plugin distutils failed with: exit code=2: cd
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_biom-format/build; python3.10 -m pytest
See:
https://buildd.debian.org/status/fetch.php?pkg=python-biom-format&arch=amd64&ver=2.1.10-2%2Bb1&stamp=1637570066&raw=0
I adapted an upstream patch, in
https://salsa.debian.org/med-team/python-biom-format/-/merge_requests/1
But it still doesn't build because we need pandas, first.
SR
--- End Message ---
--- Begin Message ---
Source: python-biom-format
Source-Version: 2.1.10-3
Done: Graham Inggs <gin...@debian.org>
We believe that the bug you reported is fixed in the latest version of
python-biom-format, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1000...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Graham Inggs <gin...@debian.org> (supplier of updated python-biom-format
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Fri, 03 Dec 2021 16:21:56 +0000
Source: python-biom-format
Built-For-Profiles: noudeb
Architecture: source
Version: 2.1.10-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Graham Inggs <gin...@debian.org>
Closes: 1000423
Changes:
python-biom-format (2.1.10-3) unstable; urgency=medium
.
* Team upload
.
[ Stefano Rivera ]
* Patch: Python 3.10 support. (Closes: #1000423)
.
[ Andreas Tille ]
* Ignore one failing test
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Files:
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