Your message dated Thu, 15 Feb 2024 15:49:12 +0000
with message-id <e1radz6-00afzm...@fasolo.debian.org>
and subject line Bug#1060804: fixed in hickle 5.0.2-8
has caused the Debian Bug report #1060804,
regarding hickle: failing tests with h5py 3.10
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1060804: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060804
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: hickle
Version: 5.0.2-7
Severity: serious
Justification: debci
h5py 3.10 is triggering test failure in hickle
54s ____________________________ test_H5NodeFilterProxy
____________________________
54s
54s h5_data = <HDF5 file "hickle_helpers_test_H5NodeFilterProxy.hdf5" (mode r)>
54s
54s def test_H5NodeFilterProxy(h5_data):
54s """
54s tests H5NodeFilterProxy class. This class allows to temporarily
rewrite
54s attributes of h5py.Group and h5py.Dataset nodes before being
loaded by
54s hickle._load method.
54s """
54s
54s # load data and try to directly modify 'type' and 'base_type'
Attributes
54s # which will fail cause hdf5 file is opened for read only
54s h5_node = h5_data['somedata']
54s pytest_errclass = KeyError if h5py.__version__ >= '3.9.0' else
OSError
54s with pytest.raises(pytest_errclass):
54s try:
54s > h5_node.attrs['type'] = pickle.dumps(list)
54s
54s
/tmp/autopkgtest-lxc.72qwkxrs/downtmp/build.c7h/src/hickle/tests/test_01_hickle_helpers.py:127:
54s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
_ _ _
54s h5py/_debian_h5py_serial/_objects.pyx:54: in
h5py._debian_h5py_serial._objects.with_phil.wrapper
54s ???
54s h5py/_debian_h5py_serial/_objects.pyx:55: in
h5py._debian_h5py_serial._objects.with_phil.wrapper
54s ???
54s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/_hl/attrs.py:104:
in __setitem__
54s self.create(name, data=value)
54s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/_hl/attrs.py:200:
in create
54s h5a.delete(self._id, name)
54s h5py/_debian_h5py_serial/_objects.pyx:54: in
h5py._debian_h5py_serial._objects.with_phil.wrapper
54s ???
54s h5py/_debian_h5py_serial/_objects.pyx:55: in
h5py._debian_h5py_serial._objects.with_phil.wrapper
54s ???
54s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
_ _ _
54s
54s > ???
54s E KeyError: 'Unable to delete attribute (no write intent on file)'
54s
54s h5py/_debian_h5py_serial/h5a.pyx:145: KeyError
Sounds like an issue that should be raised upstream,
unless it just means that hickle needs rebuilding against h5py 3.10.
-- System Information:
Debian Release: trixie/sid
APT prefers unstable-debug
APT policy: (500, 'unstable-debug'), (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 6.6.9-amd64 (SMP w/8 CPU threads; PREEMPT)
Locale: LANG=en_AU.UTF-8, LC_CTYPE=en_AU.UTF-8 (charmap=UTF-8),
LANGUAGE=en_AU:en
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
--- End Message ---
--- Begin Message ---
Source: hickle
Source-Version: 5.0.2-8
Done: Edward Betts <edw...@4angle.com>
We believe that the bug you reported is fixed in the latest version of
hickle, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1060...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Edward Betts <edw...@4angle.com> (supplier of updated hickle package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Thu, 15 Feb 2024 15:22:06 +0000
Source: hickle
Architecture: source
Version: 5.0.2-8
Distribution: unstable
Urgency: medium
Maintainer: Debian Python Team <team+pyt...@tracker.debian.org>
Changed-By: Edward Betts <edw...@4angle.com>
Closes: 1060804
Changes:
hickle (5.0.2-8) unstable; urgency=medium
.
* Skip badly written test that fails with h5py 3.10. (Closes: #1060804).
* Update copyright year.
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