Your message dated Wed, 24 Apr 2024 05:49:10 +0000
with message-id <e1rzvvg-00dbzj...@fasolo.debian.org>
and subject line Bug#1069363: fixed in atlas-ecmwf 0.37.0-1
has caused the Debian Bug report #1069363,
regarding atlas-ecmwf: FTBFS on arm64: No such file or directory
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1069363: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1069363
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: atlas-ecmwf
Version: 0.36.0-2
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20240420 ftbfs-trixie ftbfs-t64-arm64
Hi,
During a rebuild of all packages in sid, your package failed to build
on arm64.
Relevant part (hopefully):
> make[3]: Entering directory '/<<PKGBUILDDIR>>/debian/build'
> [ 45%] Generating Partitioner_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/../atlas/grid/Partitioner.h -o
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f/Partitioner_c_binding.f90 -m
> atlas_Partitioner_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 45%] Building CXX object
> src/apps/CMakeFiles/atlas-grid-points.dir/atlas-grid-points.cc.o
> cd /<<PKGBUILDDIR>>/debian/build/src/apps && /usr/bin/c++
> -I/<<PKGBUILDDIR>>/src -I/<<PKGBUILDDIR>>/debian/build/src
> -I/<<PKGBUILDDIR>>/atlas_io/src -I/<<PKGBUILDDIR>>/debian/build/atlas_io/src
> -I/usr/include/aarch64-linux-gnu/eckit
> -I/usr/include/aarch64-linux-gnu/eckit/geometry
> -I/usr/include/aarch64-linux-gnu/eckit/linalg
> -I/usr/include/aarch64-linux-gnu/eckit/maths
> -I/usr/lib/aarch64-linux-gnu/openmpi/include
> -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi
> -I/usr/include/aarch64-linux-gnu/eckit/mpi
> -I/usr/include/aarch64-linux-gnu/eckit/option -isystem /usr/include/eigen3 -g
> -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
> -fstack-clash-protection -Wformat -Werror=format-security
> -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -pipe -O3
> -DNDEBUG -std=gnu++17 -fPIE -fopenmp -MD -MT
> src/apps/CMakeFiles/atlas-grid-points.dir/atlas-grid-points.cc.o -MF
> CMakeFiles/atlas-grid-points.dir/atlas-grid-points.cc.o.d -o
> CMakeFiles/atlas-grid-points.dir/atlas-grid-points.cc.o -c
> /<<PKGBUILDDIR>>/src/apps/atlas-grid-points.cc
> [ 45%] Generating State_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/../atlas/field/State.h -o
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f/State_c_binding.f90 -m
> atlas_State_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 45%] Generating WriteLoadBalanceReport_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/../atlas/mesh/actions/WriteLoadBalanceReport.h
> -o
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f/WriteLoadBalanceReport_c_binding.f90
> -m atlas_WriteLoadBalanceReport_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 45%] Generating atlas_mesh_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/../atlas/mesh/detail/MeshIntf.h -o
> atlas_mesh_c_binding.f90 -m atlas_mesh_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 45%] Generating atlas_meshbuilder_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/../atlas/mesh/detail/MeshBuilderIntf.h -o
> atlas_meshbuilder_c_binding.f90 -m atlas_meshbuilder_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 45%] Generating atlas_read_file_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/internals/atlas_read_file.h -o
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f/atlas_read_file_c_binding.f90 -m
> atlas_atlas_read_file_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 46%] Generating atlas_trace_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/runtime/atlas_trace.h -o
> atlas_trace_c_binding.f90 -m atlas_trace_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 46%] Generating distribution_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/../atlas/grid/detail/distribution/DistributionImpl.h
> -o distribution_c_binding.f90 -m atlas_distribution_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 47%] Generating domain_c_binding.f90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/python3
> /<<PKGBUILDDIR>>/tools/c2f.py
> /<<PKGBUILDDIR>>/src/atlas_f/../atlas/domain/detail/Domain.h -o
> domain_c_binding.f90 -m atlas_domain_c_binding -t
> '{"idx_t":"integer(c_int)","gidx_t":"integer(c_long)"}'
> [ 47%] [fypp] Preprocessor generating field/atlas_FieldSet_module.F90
> cd /<<PKGBUILDDIR>>/debian/build/src/atlas_f && /usr/bin/cmake -E env
> FCKIT_EVAL_ARGS_EXCLUDE="-D[[:space:]]?.*=([0-9])+L"
> /usr/./libexec/fckit-eval /usr/bin/python3 /usr/./libexec/fckit-fypp -l 132
> -p -n -I\ /<<PKGBUILDDIR>>/src/atlas_f\ -I\
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f\ -I\ /<<PKGBUILDDIR>>/src\ -I\
> /<<PKGBUILDDIR>>/debian/build/src\ -I\
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f\ -I\
> /<<PKGBUILDDIR>>/debian/build/module\ -I\ /<<PKGBUILDDIR>>/src\ -I\
> /<<PKGBUILDDIR>>/debian/build/src\ -I\ /usr/include/aarch64-linux-gnu\ -I\
> /usr/include/aarch64-linux-gnu/eckit\ -I\ /usr/include/aarch64-linux-gnu\ -I\
> /usr/include/aarch64-linux-gnu/eckit/geometry\ -I\
> /usr/include/aarch64-linux-gnu\ -I\
> /usr/include/aarch64-linux-gnu/eckit/linalg\ -I\
> /usr/include/aarch64-linux-gnu\ -I\
> /usr/include/aarch64-linux-gnu/eckit/maths\ -I\ /usr/include/eigen3\ -I\
> /usr/lib/aarch64-linux-gnu/openmpi/include\ -I\
> /usr/lib/aarch64-linux-gnu/openmpi/include/openmpi\ -I\
> /usr/include/aarch64-linux-gnu\ -I\ /usr/include/aarch64-linux-gnu/eckit/mpi\
> -I\ /usr/include/aarch64-linux-gnu\ -I\
> /usr/include/aarch64-linux-gnu/eckit/option\ -I\
> /<<PKGBUILDDIR>>/atlas_io/src\ -I\
> /<<PKGBUILDDIR>>/debian/build/atlas_io/src\ -I\ /usr/include/eigen3\ -I\
> /usr/include/aarch64-linux-gnu\ -I\
> /usr/lib/aarch64-linux-gnu/fortran/gfortran-mod-15/fckit\ -I\
> /usr/include/aarch64-linux-gnu\ -I\ /usr/include/aarch64-linux-gnu/fckit -I\
> /<<PKGBUILDDIR>>/src\ -I\ /<<PKGBUILDDIR>>/debian/build/src\ -I\
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f\ -I\
> /<<PKGBUILDDIR>>/debian/build/module\ -I\ /usr/include/aarch64-linux-gnu\ -I\
> /usr/lib/aarch64-linux-gnu/fortran/gfortran-mod-15/fckit\ -I\
> /usr/include/aarch64-linux-gnu\ -I\ /usr/include/aarch64-linux-gnu/fckit
> /<<PKGBUILDDIR>>/src/atlas_f/field/atlas_FieldSet_module.fypp
> /<<PKGBUILDDIR>>/debian/build/src/atlas_f/field/atlas_FieldSet_module.F90
> No such file or directory
> make[3]: *** [src/atlas_f/CMakeFiles/atlas_ecmwf_f.dir/build.make:307:
> src/atlas_f/field/atlas_FieldSet_module.F90] Error 1
The full build log is available from:
http://qa-logs.debian.net/2024/04/20/atlas-ecmwf_0.36.0-2_unstable-arm64.log
All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20240420;users=lu...@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20240420&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Source: atlas-ecmwf
Source-Version: 0.37.0-1
Done: Alastair McKinstry <mckins...@debian.org>
We believe that the bug you reported is fixed in the latest version of
atlas-ecmwf, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1069...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Alastair McKinstry <mckins...@debian.org> (supplier of updated atlas-ecmwf
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Tue, 23 Apr 2024 18:36:19 +0100
Source: atlas-ecmwf
Architecture: source
Version: 0.37.0-1
Distribution: unstable
Urgency: medium
Maintainer: Alastair McKinstry <mckins...@debian.org>
Changed-By: Alastair McKinstry <mckins...@debian.org>
Closes: 1069363
Changes:
atlas-ecmwf (0.37.0-1) unstable; urgency=medium
.
* New upstream release. Closes: #1069363
* Build-dep on fypp
* Depend on fckit-dev >= 0.12.1-2 for path fix for tools
* Replace recommends: pkg-config => pkgconf
* Now set ENABLE_CGAL
Checksums-Sha1:
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49802b7d9dc5da50748b2eafd6d8255637dba42a 4744576 atlas-ecmwf_0.37.0.orig.tar.xz
ab2019365917a68a548bf12910436f4701a82516 13716
atlas-ecmwf_0.37.0-1.debian.tar.xz
Checksums-Sha256:
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atlas-ecmwf_0.37.0-1.dsc
f01da94d922725c570fb888a7cf15f019ee5c2bb8c88a609a40669929616589d 4744576
atlas-ecmwf_0.37.0.orig.tar.xz
f5b2ae32c9a37d24efaf839c1cb49e1c36ca281ad6cf3091a89ab1de31be893e 13716
atlas-ecmwf_0.37.0-1.debian.tar.xz
Files:
7829a996b23b26d4d3e5b857509802f4 2453 science optional atlas-ecmwf_0.37.0-1.dsc
c98c2c2d185c971a11eb1550f9f66b62 4744576 science optional
atlas-ecmwf_0.37.0.orig.tar.xz
fe436533eb0d5bf3f84fabaf44d731bc 13716 science optional
atlas-ecmwf_0.37.0-1.debian.tar.xz
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