Your message dated Sat, 05 Aug 2017 00:04:40 +0000 with message-id <e1ddma8-000e4p...@fasolo.debian.org> and subject line Bug#853405: fixed in freecontact 1.0.21-6 has caused the Debian Bug report #853405, regarding freecontact: ftbfs with GCC-7 to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 853405: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=853405 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: src:freecontact Version: 1.0.21-4 Severity: normal Tags: sid buster User: debian-...@lists.debian.org Usertags: ftbfs-gcc-7 Please keep this issue open in the bug tracker for the package it was filed for. If a fix in another package is required, please file a bug for the other package (or clone), and add a block in this package. Please keep the issue open until the package can be built in a follow-up test rebuild. The package fails to build in a test rebuild on at least amd64 with gcc-7/g++-7, but succeeds to build with gcc-6/g++-6. The severity of this report may be raised before the buster release. There is no need to fix this issue in time for the stretch release. The full build log can be found at: http://people.debian.org/~doko/logs/gcc7-20170126/freecontact_1.0.21-4_unstable_gcc7.log The last lines of the build log are at the end of this report. To build with GCC 7, either set CC=gcc-7 CXX=g++-7 explicitly, or install the gcc, g++, gfortran, ... packages from experimental. apt-get -t=experimental install g++ Common build failures are new warnings resulting in build failures with -Werror turned on, or new/dropped symbols in Debian symbols files. For other C/C++ related build failures see the porting guide at http://gcc.gnu.org/gcc-7/porting_to.html [...] make[2]: Leaving directory '/<<PKGBUILDDIR>>/lib' Making install in src make[2]: Entering directory '/<<PKGBUILDDIR>>/src' make[3]: Entering directory '/<<PKGBUILDDIR>>/src' /bin/mkdir -p '/<<PKGBUILDDIR>>/debian/tmp/usr/bin' /bin/mkdir -p '/<<PKGBUILDDIR>>/debian/tmp/usr/share/doc/freecontact/examples' /bin/mkdir -p '/<<PKGBUILDDIR>>/debian/tmp/usr/share/freecontact' /bin/mkdir -p '/<<PKGBUILDDIR>>/debian/tmp/usr/share/freecontact' /bin/mkdir -p '/<<PKGBUILDDIR>>/debian/tmp/usr/share/man/man1' /bin/bash ../libtool --mode=install /usr/bin/install -c freecontact '/<<PKGBUILDDIR>>/debian/tmp/usr/bin' /usr/bin/install -c -m 644 BioXSD-1.1.xsd freecontact_input.xsd freecontact_output.xsd '/<<PKGBUILDDIR>>/debian/tmp/usr/share/freecontact' /usr/bin/install -c -m 644 demo_1000.aln demo_1000.psicov.50 PF00071_v25_999.fa PF00071_v25_999.xml PF00071_v25_999.evfold.50 PF00071_v25_999.evfold.50.xml '/<<PKGBUILDDIR>>/debian/tmp/usr/share/doc/freecontact/examples' /usr/bin/install -c a2m2aln '/<<PKGBUILDDIR>>/debian/tmp/usr/share/freecontact' /usr/bin/install -c -m 644 freecontact.1 '/<<PKGBUILDDIR>>/debian/tmp/usr/share/man/man1' libtool: warning: '../lib/libfreecontact.la' has not been installed in '/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/freecontact /<<PKGBUILDDIR>>/debian/tmp/usr/bin/freecontact make[3]: Leaving directory '/<<PKGBUILDDIR>>/src' make[2]: Leaving directory '/<<PKGBUILDDIR>>/src' make[2]: Entering directory '/<<PKGBUILDDIR>>' make[3]: Entering directory '/<<PKGBUILDDIR>>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<<PKGBUILDDIR>>' make[2]: Leaving directory '/<<PKGBUILDDIR>>' make[1]: Leaving directory '/<<PKGBUILDDIR>>' debian/rules override_dh_install make[1]: Entering directory '/<<PKGBUILDDIR>>' dh_install d-shlibmove --commit \ --multiarch \ --exclude-la \ --devunversioned \ --override s/libblas3-dev/libblas-dev/ \ --v5 \ --override s/libgfortran3-dev/libgfortran-5-dev/ \ --override s/libquadmath0-dev/libgcc-5-dev/ \ --override s/liblapack3-dev/liblapack-dev/ \ --movedev debian/tmp/usr/include/* usr/include \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility --> libblas-dev package exists. --> libgcc-5-dev package exists. devlibs error: There is no package matching [libgfortran4-dev] and noone provides it, please report bug to d-shlibs maintainer --> liblapack-dev package exists. debian/rules:29: recipe for target 'override_dh_install' failed make[1]: *** [override_dh_install] Error 1 make[1]: Leaving directory '/<<PKGBUILDDIR>>' debian/rules:11: recipe for target 'binary' failed make: *** [binary] Error 2 dpkg-buildpackage: error: fakeroot debian/rules binary gave error exit status 2
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--- Begin Message ---Source: freecontact Source-Version: 1.0.21-6 We believe that the bug you reported is fixed in the latest version of freecontact, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 853...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated freecontact package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Fri, 04 Aug 2017 23:45:44 +0200 Source: freecontact Binary: freecontact libfreecontact0v5 libfreecontact-dev libfreecontact-doc Architecture: source amd64 all Version: 1.0.21-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: freecontact - fast protein contact predictor libfreecontact-dev - fast protein contact predictor library - development files libfreecontact-doc - documentation for libfreecontact libfreecontact0v5 - fast protein contact predictor library Closes: 853405 Changes: freecontact (1.0.21-6) unstable; urgency=medium . [ Steffen Moeller ] * debian/upstream/metadata: Added ref to OMICtools and declared bio.tools, RRID misssing . [ Andreas Tille ] * GCC 7 transition Closes: #853405 * debhelper 10 * remove explicit -dbg package * cme fix dpkg-control * hardening Checksums-Sha1: b73b3ac2d130e26c85d1c20ee20655de9a9834ee 2466 freecontact_1.0.21-6.dsc aebbe34be49bbba1fa0eca329e34ac3c7eb2332d 6980 freecontact_1.0.21-6.debian.tar.xz 1dbc631bd3e8135851642d658d348737b832e21f 3026456 freecontact-dbgsym_1.0.21-6_amd64.deb 8d8b807c96b20912f4c9336d9dc1cd881935155c 8505 freecontact_1.0.21-6_amd64.buildinfo 4260bb9003584efe84d327a491aa309789871820 335518 freecontact_1.0.21-6_amd64.deb ba79304bcd062ae19d0dc1aa172212fd96ecd622 78936 libfreecontact-dev_1.0.21-6_amd64.deb e13a78ae5bfec5716b4efd8a73da60e3cc2e1684 100402 libfreecontact-doc_1.0.21-6_all.deb 444da2bca25470d0a38ddf130de82bba368c222f 374752 libfreecontact0v5-dbgsym_1.0.21-6_amd64.deb 7c8ebd7c8a093ac05fa4bf8913b92fce71c4bed7 70336 libfreecontact0v5_1.0.21-6_amd64.deb Checksums-Sha256: 1a4cdbffa07a14e7a20a540e8c26d6505efe97044a0b8fb9233867f6e466142d 2466 freecontact_1.0.21-6.dsc 035e93b97d9a5fee720b8d255b885f579a18d5f9b5cfd5f48739e77e11c13400 6980 freecontact_1.0.21-6.debian.tar.xz 1a7df45730f30615117a1f94e699bdb6887a384162a820aa1c52efa645816ed2 3026456 freecontact-dbgsym_1.0.21-6_amd64.deb 2f71a5b6c27b085e5ef02b0f8b480c1b7debcaf39e52373c43e6514c2ea20b1e 8505 freecontact_1.0.21-6_amd64.buildinfo fc86f85285161ead98e73a5c6cf0bf518c7d83530c1d11c67dd5d57547770197 335518 freecontact_1.0.21-6_amd64.deb 1d18b3d69a426d49776640829185c7673da26fd23853797e32d9f70d32f6242a 78936 libfreecontact-dev_1.0.21-6_amd64.deb 87fff1ac64ef1645e2380d5fa421bc0504fc69c04940784536b280e3a8f35f3b 100402 libfreecontact-doc_1.0.21-6_all.deb 5757f509d63a6626c7565b25895cc36525531a5b7c8e3ff8ecc2d56d4728ebf4 374752 libfreecontact0v5-dbgsym_1.0.21-6_amd64.deb 40b3cc7385731a1e70b7de7cb23f259d8dd4804da0e68aff59391f6649f276a6 70336 libfreecontact0v5_1.0.21-6_amd64.deb Files: 2ce1ef63d05b00c1d78177c527b85871 2466 science optional freecontact_1.0.21-6.dsc fe4eaca64ce34ac1d2f24eafa269affd 6980 science optional freecontact_1.0.21-6.debian.tar.xz 2363b9404464f685ff67bc35eab383f0 3026456 debug extra freecontact-dbgsym_1.0.21-6_amd64.deb 87f2e0adeecc694ea9cf5177100bc9a3 8505 science optional freecontact_1.0.21-6_amd64.buildinfo 743ea7bf0e91e86b0043ae790c653534 335518 science optional freecontact_1.0.21-6_amd64.deb 5892f91d8ac289ca7deb5f379588dd4e 78936 libdevel optional libfreecontact-dev_1.0.21-6_amd64.deb d5a82806fadb36009ace1a2b3ea93c68 100402 doc optional libfreecontact-doc_1.0.21-6_all.deb cf6a26aa9cfbf58aee976dd8a9e4da3d 374752 debug extra libfreecontact0v5-dbgsym_1.0.21-6_amd64.deb cc7987d9403d986cbf04c517403b6971 70336 libs optional libfreecontact0v5_1.0.21-6_amd64.deb -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlmFBY0RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGt4hAAkI/DsFG61ZejQ6O6gYHpvDPh70JSxbnv JqlfQ6GejuSqSrWOzuH3ohOmne92ntcACXv4964gNbCGoCn2IASjK1S+Ld1+0iT0 YjFkloenBGvd69dJzQ4kCOyCqgPBahQz0QtOtxryl4i1xh4kpqS4N4YvvT89Bu/l Is3KMQV377wAqWjadYH5OXQbZ5S6lCodFaU5K72mlOS+h9I3jTVPwxJFRSxh6MFy Ek4vuokL/IYpG8GISRcjk+5kJnchiQAE9dBGBuLe9jruS3sdwsCxGKsaJiauePmY 6VXJ7wo+zDeu7OS0SoVNsH/9EyQllTSYUYBHm/cu4UXnOo4cY+QYdDPzFhR/r1jq +VFxRCJa12arOUryl12oR9/53K9fwNZmiANm8OviGd2GNiL9FTSFprhn3OG9bdy3 qAtTpQ8R2jrli4/wXWITbtd0/UdCvMaOjLX9bS8TbjMivI5VpK+gPl5MkJpkwcpr pEwsKi3a1fw5rGUJJUxNKT+CfUGksLDWBn9yO9tGalmYqXqJE7Vz/1675JWkJaNv P64FXKYxS0ToKr5ds6OEoe9NjN3G6u0Yi7re9tzgizfJtX7wyg/ewmx5+tEGTzy1 T2APDWwsaIMqDf9fwTgoa6Wd6hzajCcVVbkXOFwHqVGvKLdRGyj6oBhikjFx6+wb lsiK4TWBZtE= =OkK9 -----END PGP SIGNATURE-----
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