Your message dated Fri, 16 Nov 2018 12:04:19 +0000 with message-id <e1gncrd-000io1...@fasolo.debian.org> and subject line Bug#913839: fixed in htsjdk 2.16.1+dfsg-3 has caused the Debian Bug report #913839, regarding htsjdk accesses the internet during the build to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 913839: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=913839 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: htsjdk Version: 2.16.1+dfsg-2 Severity: serious Tags: ftbfs https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/htsjdk.html ... Gradle suite > Gradle test > htsjdk.variant.PrintVariantsExampleTest.testExampleWriteFile FAILED java.net.UnknownHostException: profitbricks-build15-amd64: profitbricks-build15-amd64: Temporary failure in name resolution at java.base/java.net.InetAddress.getLocalHost(InetAddress.java:1642) at htsjdk.variant.example.PrintVariantsExample.printConfigurationInfo(PrintVariantsExample.java:96) at htsjdk.variant.example.PrintVariantsExample.main(PrintVariantsExample.java:70) at htsjdk.variant.PrintVariantsExampleTest.testExampleWriteFile(PrintVariantsExampleTest.java:52) Caused by: java.net.UnknownHostException: profitbricks-build15-amd64: Temporary failure in name resolution at java.base/java.net.Inet6AddressImpl.lookupAllHostAddr(Native Method) at java.base/java.net.InetAddress$PlatformNameService.lookupAllHostAddr(InetAddress.java:929) at java.base/java.net.InetAddress.getAddressesFromNameService(InetAddress.java:1515) at java.base/java.net.InetAddress$NameServiceAddresses.get(InetAddress.java:848) at java.base/java.net.InetAddress.getAllByName0(InetAddress.java:1505) at java.base/java.net.InetAddress.getLocalHost(InetAddress.java:1637) ... 3 more Gradle is still running, please be patient... ... 26571 tests completed, 1 failed, 4 skipped Finished generating test XML results (1.113 secs) into: /build/1st/htsjdk-2.16.1+dfsg/build/test-results/test Generating HTML test report... Finished generating test html results (1.41 secs) into: /build/1st/htsjdk-2.16.1+dfsg/build/reports/tests/test :test FAILED :test (Thread[Task worker for ':' Thread 5,5,main]) completed. Took 12 mins 34.575 secs. FAILURE: Build failed with an exception.
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--- Begin Message ---Source: htsjdk Source-Version: 2.16.1+dfsg-3 We believe that the bug you reported is fixed in the latest version of htsjdk, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 913...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Olivier Sallou <osal...@debian.org> (supplier of updated htsjdk package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Fri, 16 Nov 2018 11:06:41 +0000 Source: htsjdk Binary: libhtsjdk-java libhtsjdk-java-doc Architecture: source all Version: 2.16.1+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: libhtsjdk-java - Java API for high-throughput sequencing data (HTS) formats libhtsjdk-java-doc - Documentation for the java HTSJDK library Closes: 913839 Changes: htsjdk (2.16.1+dfsg-3) unstable; urgency=medium . * Fix FTBS on debian test servers due to ip/name resolution Remove related test. Closes: #913839 Checksums-Sha1: db3109f65c11677670fe15a5af51539556e629e2 2458 htsjdk_2.16.1+dfsg-3.dsc c92bffa3658390ee86d43b358eed19af87270f91 28528 htsjdk_2.16.1+dfsg-3.debian.tar.xz 1f390bf68b036786c5ef1df1c17fc99080a0bbce 15663 htsjdk_2.16.1+dfsg-3_amd64.buildinfo eff945970fd3b77b101d4ea15c61eec70131da77 1072004 libhtsjdk-java-doc_2.16.1+dfsg-3_all.deb 4caf39c2359963ca0f793d5ae2d85387c8106bea 1493518 libhtsjdk-java_2.16.1+dfsg-3_all.deb Checksums-Sha256: 2c3e34bb64e745c57002b13c5f64c374944a8cf94edb3b10ff891fb9039d4fd2 2458 htsjdk_2.16.1+dfsg-3.dsc 77c09f676051e787c46d5737ec12579f439360e5426bb329f354d568742e5ba8 28528 htsjdk_2.16.1+dfsg-3.debian.tar.xz d3f28513b241908f86007649b2f487f0745d6770abfaed7b1fae138417d79a2e 15663 htsjdk_2.16.1+dfsg-3_amd64.buildinfo 5e228549ae60088f71cdd26227b2bd5dca4354653fae892d45343bff6aa8ec28 1072004 libhtsjdk-java-doc_2.16.1+dfsg-3_all.deb 2eff2ed99ad9aa8d3b9a2eb498dc09834361d34cfdf4bb587095daeaab9b1ff3 1493518 libhtsjdk-java_2.16.1+dfsg-3_all.deb Files: e7f442c345bd8d258e9c08fc979b30f1 2458 science optional htsjdk_2.16.1+dfsg-3.dsc 6362026be103f5a4ba597c70310af96a 28528 science optional htsjdk_2.16.1+dfsg-3.debian.tar.xz 8ee1f6b96698a39323fc1c3a2fa373ba 15663 science optional htsjdk_2.16.1+dfsg-3_amd64.buildinfo 582925dab8e315e3867cdbdc66fd236e 1072004 doc optional libhtsjdk-java-doc_2.16.1+dfsg-3_all.deb 7ed9b1b601190311350851f769a04def 1493518 java optional libhtsjdk-java_2.16.1+dfsg-3_all.deb -----BEGIN PGP SIGNATURE----- iQJHBAEBCAAxFiEEX7Rvg9O5UgRjNdJteNxo2zJthDgFAlvur7MTHG9zYWxsb3VA ZGViaWFuLm9yZwAKCRB43GjbMm2EOH3ND/48uuw7Z8F5IPPgZIpchAKeAQ3Xl98n jIpJCvtrbBk4j13lv362J3Xw6PLj56U5rPOpawnXYBJ2N9FauT+C00yEPDPwMaXT SvHXXyZN/QFNY/h9WjUyXbPp1354h6qYQ1hPEGdFr+GuWrMejMNSkFREbgCwi4we 9ce5hPwI6BZZR/9RkSCnamQJPIaS/hzSDHVHZCu+NAW82IrXR8DduoalGgUjh7Bk weFgAwQBbDdTt+W6uo8UhwAHYzs/PrYVMi0ye2tQb0JZWDvfhbUFLrszFxfy5x63 BQItlzTiu8AWqVkurYfdTAYTfDXvDT8MOy/s3nUVefZWwPqItMTAZYNaPx5Rfgn2 2m2ctKX2fmGTblOCwhFsood3nSCNAOAvq7AogevuR2WRZLHRWcJUpi1YgvcR+lXc mIOyGLFYq3fSzKd4CsiLLcfpIZwaTeIsTZfIPE6+57J6FfAvF37ABwoR84FmWXKl Qywcb2wOdOenGDLPkriK6Corcxw8/kwNMkmm3NX2IaRIp4XT8Sj7M/fJPNstJEFj QXIUaJZyB5biImMueXzSPg9EotlbIgkDETEF42MMa+3RGSMLKf12iThcjJ2Ewcmz ZNNUfBQ6cjzLypaEXbS4+uX94t1tYHIl3ddRx5wndJJRGd5lbdtnCGvWKE0s0Zfj EALNNclDHahgRQ== =AmoR -----END PGP SIGNATURE-----
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