Hi BioPython developers,
the problem is fixed by the patch you can find here:
https://anonscm.debian.org/viewvc/debian-med/trunk/packages/python-biopython/trunk/debian/patches/fix_test_phyml_tool.patch?view=markup
Please review and include it in your next release.
Kind regards and thanks
On Wed, Sep 23, 2015 at 11:00:57AM +0200, Thorsten Glaser wrote:
> Package: hunspell-en-gb
> Version: 1:5.0.1+dfsg-3
> Severity: serious
> Justification: Policy 7.4
>
> Today, my dist-upgrade broke:
>
>
> The following NEW packages will be installed:
> hunspell-en-gb
...
> Trying to install
Processing commands for cont...@bugs.debian.org:
> limit source python-biopython
Limiting to bugs with field 'source' containing at least one of
'python-biopython'
Limit currently set to 'source':'python-biopython'
> tags 799820 + pending
Bug #799820 [src:python-biopython] python-biopython:
Your message dated Wed, 23 Sep 2015 13:26:01 +
with message-id
and subject line Bug#786454: Removed package(s) from unstable
has caused the Debian Bug report #787876,
regarding libgee: FTBFS with valac 0.28
to be marked as done.
This means that you claim
Your message dated Wed, 23 Sep 2015 11:43:20 +
with message-id
and subject line Bug#798591: fixed in libreoffice 1:5.0.2-1
has caused the Debian Bug report #798591,
regarding libreoffice: Long click closes Libre Office 5
to be marked as done.
This means
Hello Ritesh
> Just FYI. This same issue is fixed with the version currently residing in
> experimental. I mean, the fix was inherited with the rebase to the git repo.
> :-)
> Incase if you have time to just verify the same with the experimental
> version, please do so.
Certain packages had
Thank you Niels, for confirming this. I'll now work on the stable
update. I'll ping you (soon) one more time, to verify the stable
update, before I push it to the Debian Security Team.
Ritesh
On Wed, 2015-09-23 at 12:23 +, Baumgartner Niels, Bedag wrote:
> Hello Ritesh
>
> > Just FYI.
Processing commands for cont...@bugs.debian.org:
> notfound 799840 4.1.20+dfsg-1
Bug #799840 [libpam-smbpass] libpam-smbpass: installed libpam-smbpass break all
local login
There is no source info for the package 'libpam-smbpass' at version
'4.1.20+dfsg-1' with architecture ''
Unable to make a
Package: gcc-5-arm-linux-gnueabihf
Version: 5.2.1-16cross1
Severity: grave
Justification: causes non-serious data loss
Dear Maintainer,
In order to reproduce the problem, I have a .config which I tried to
build my v4.3-rc1-based kernel tree. I'm cross-compiling kernel with
ARMHF GCC-5 and this
Processing commands for cont...@bugs.debian.org:
> tags 799307 + patch
Bug #799307 [src:rpcbind] rpcbind: CVE-2015-7236: remote triggerable
use-after-free in rpcbind
Ignoring request to alter tags of bug #799307 to the same tags previously set
> thanks
Stopping processing here.
Please contact
Hi Anibal,
On Thu, Sep 17, 2015 at 08:14:59PM +0200, Salvatore Bonaccorso wrote:
> Source: rpcbind
> Version: 0.2.0-4.1
> Severity: grave
> Tags: security upstream patch
> Justification: user security hole
>
> Hi,
>
> the following vulnerability was published for rpcbind.
>
> CVE-2015-7236[0]:
Thanks Andreas,
I've logged this as:
https://github.com/biopython/biopython/issues/623
Which version of phyml is being used here?
Eric - can you look at this please?
Peter
On Wed, Sep 23, 2015 at 12:48 PM, Andreas Tille wrote:
> Hi BioPython developers,
>
> the problem is
Processing control commands:
> tag -1 pending
Bug #799845 [hunspell-en-gb] myspell-en-gb, hunspell-en-gb: *another* file
conflict
Added tag(s) pending.
--
799845: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=799845
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
control: tag -1 pending
On Wed, Sep 23, 2015 at 12:25:13PM +0200, Agustin Martin wrote:
> On Wed, Sep 23, 2015 at 11:00:57AM +0200, Thorsten Glaser wrote:
> > Package: hunspell-en-gb
> > Version: 1:5.0.1+dfsg-3
> > Severity: serious
> > Justification: Policy 7.4
> >
> > Today, my dist-upgrade
WIP at https://github.com/davesteele/cloudprint-service/tree/updates-jessie
On Wed, Sep 16, 2015 at 9:44 PM, Vagrant Cascadian wrote:
> Package: cloudprint
> Version: 0.11-5
> Severity: grave
> Control: fixed -1 0.13-1
>
> $ cloudprint
> Google username: ghkjadhsg
>
Your message dated Wed, 23 Sep 2015 17:35:00 +
with message-id
and subject line Bug#799839: fixed in python-libdiscid 0.4.1-4
has caused the Debian Bug report #799839,
regarding python-libdiscid: FTBFS: error: unknown type name 'discid_feature'
to be
Your message dated Wed, 23 Sep 2015 16:06:06 +
with message-id
and subject line Bug#767561: fixed in dogtag-pki 10.2.6-1
has caused the Debian Bug report #767561,
regarding pki-tools,strongswan-starter: error when trying to install together
to be marked as
Your message dated Wed, 23 Sep 2015 16:09:43 +
with message-id
and subject line Bug#799845: fixed in libreoffice-dictionaries 1:5.0.2-1
has caused the Debian Bug report #799845,
regarding myspell-en-gb, hunspell-en-gb: *another* file conflict
to be marked
Your message dated Wed, 23 Sep 2015 16:10:35 +
with message-id
and subject line Bug#799820: fixed in python-biopython 1.65+dfsg-2
has caused the Debian Bug report #799820,
regarding python-biopython: FTBFS: No such file or directory:
Processing control commands:
> tags -1 + moreinfo
Bug #799872 [gcc-5-arm-linux-gnueabihf] gcc-5-arm-linux-gnueabihf: when
compiling Linux Kernel's rcutiny.h, GCC-5 segfaults
Added tag(s) moreinfo.
> severity -1 normal
Bug #799872 [gcc-5-arm-linux-gnueabihf] gcc-5-arm-linux-gnueabihf: when
Your message dated Wed, 23 Sep 2015 16:06:06 +
with message-id
and subject line Bug#789138: fixed in dogtag-pki 10.2.6-1
has caused the Debian Bug report #789138,
regarding dogtag-pki: FTBFS
to be marked as done.
This means that you claim that the problem
Control: tags -1 + moreinfo
Control: severity -1 normal
On 23.09.2015 17:01, Felipe Balbi wrote:
Package: gcc-5-arm-linux-gnueabihf
Version: 5.2.1-16cross1
Severity: grave
Justification: causes non-serious data loss
Dear Maintainer,
In order to reproduce the problem, I have a .config which I
Processing commands for cont...@bugs.debian.org:
> # ha. some subject, only 3 minutes apart.
> forcemerge 799888 799889
Bug #799888 [src:libfont-freetype-perl] libfont-freetype-perl: FTBFS on many
architectures
Bug #799888 [src:libfont-freetype-perl] libfont-freetype-perl: FTBFS on many
* László Böszörményi (GCS) , 2015-09-22, 19:40:
Also, now might be a good moment to move libGraphicsMagickWand to a
seperate binary package.
Do you know any package which needs only that library (ie does it worth
to be a separate one)?
I don't know. I mentioned because the
Source: python-sfml
Version: 2.2~git20150611.196c88+dfsg-1
Severity: serious
Tags: sid stretch upstream
Forwarded: https://github.com/Sonkun/python-sfml/issues/119
By chance I happened to stumble across this failing mips64el build log:
On Tue, 22 Sep 2015 21:58:46 +0200 wrote:
> On Tue, Sep 22, 2015 at 8:27 PM, Bob Friesenhahn
> wrote:
> > If there are two packages with different quantum depth, then they should be
> > able to co-exist without conflict. Likewise, the existing
Processing commands for cont...@bugs.debian.org:
> tags 799826 + pending
Bug #799826 [gnome-documents] gnome-documents: completely fails to load with
errors
Added tag(s) pending.
> thanks
Stopping processing here.
Please contact me if you need assistance.
--
799826:
Package: sddm
Version: 0.12.0-4
Severity: critical
Justification: breaks the whole system
Dear Maintainer,
I normally use a laptop where I am the single user, so I only login once
in sddm, and I use "shutdown" when I (rarely) need to turn it off.
Today I needed to logout and login again. What
Source: python-libdiscid
Version: 0.4.1-3
Severity: serious
Justification: fails to build from source
User: reproducible-bui...@lists.alioth.debian.org
Usertags: ftbfs
X-Debbugs-Cc: reproducible-bui...@lists.alioth.debian.org
Dear Maintainer,
python-libdiscid fails to build from source in
Package: libpam-smbpass
Version: 4.1.20+dfsg-1
Severity: critical
Justification: breaks the whole system
On one of my computer, when libpam-smbpass is installed, all local login
attempt fail.
su, sudo, login on console, using gdm or sddm all break. Only ssh succed
I've report in log like :
Package: hunspell-en-gb
Version: 1:5.0.1+dfsg-3
Severity: serious
Justification: Policy 7.4
Today, my dist-upgrade broke:
The following NEW packages will be installed:
hunspell-en-gb
[…]
The following packages will be upgraded:
libwayland-egl1-mesa:i386 libwayland-egl1-mesa libxml2-utils
Your message dated Wed, 23 Sep 2015 08:19:22 +
with message-id
and subject line Bug#799826: fixed in gnome-documents 3.18.0-2
has caused the Debian Bug report #799826,
regarding gnome-documents: completely fails to load with errors
to be marked as done.
Source: saods9
Version: 7.4~b7+repack-3
Severity: Serious
This package should not have gone to unstable.
It shall not enter testing.
Package: googleearth-package
Version: 1.2.2
Severity: grave
Justification: renders package unusable
Dear Maintainer,
it looks like that recently lsb-core disappeared from sid but the package
generated by googleearth-package depends on it.
This makes googleearth uninstallable.
Alberto
--
Source: libfont-freetype-perl
Version: 0.06-1
Severity: serious
Tags: upstream
Justification: fails to build from source (but built successfully in the past)
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512
0.06-1 has test failures on many architectures:
Your message dated Wed, 23 Sep 2015 21:23:40 +
with message-id
and subject line Bug#796100: fixed in ruby-bootstrap-sass 3.3.5.1-3
has caused the Debian Bug report #796100,
regarding Build-depends on phantomjs (slated for removal)
to be marked as done.
Your message dated Wed, 23 Sep 2015 22:05:39 +
with message-id
and subject line Bug#795814: fixed in k3d 0.8.0.3-8
has caused the Debian Bug report #795814,
regarding FTBFS: boost/math/tools/test.hpp: No such file or directory
to be marked as done.
This
Your message dated Wed, 23 Sep 2015 22:06:24 +
with message-id
and subject line Bug#785857: fixed in xneur 0.17.0-2
has caused the Debian Bug report #785857,
regarding xneur: Please update to GStreamer 1.x
to be marked as done.
This means that you claim
On Tue, Sep 22, 2015 at 8:10 PM, Julien Cristau wrote:
> On Tue, Sep 22, 2015 at 19:40:42 +0200, László Böszörményi (GCS) wrote:
>> Yes, I know that. Still the packages can be tracked during a
>> transition via the package name if those were compiled against the
>>
Hi Tobias!,
On Tue, Sep 22, 2015 at 10:25:20PM +0200, Tobias Frost wrote:
> Hi Muammar,
>
> the link to the NEW queue is now 404ing... What happened?
:( this time was the license again, I forgot to add some of them.
> (It would be great if the version could enter the archives, other
> packages
Your message dated Wed, 23 Sep 2015 22:52:21 -0400
with message-id <56036565.9070...@debian.org>
and subject line Fixed in 3.3.3a+svn818-10
has caused the Debian Bug report #790233,
regarding cigi-ccl: FTBFS with glibc 2.21 and gcc-5
to be marked as done.
This means that you claim that the
Your message dated Thu, 24 Sep 2015 05:03:54 +
with message-id
and subject line Bug#799364: fixed in cython 0.23.2+git16-ga8fbae1-1
has caused the Debian Bug report #799364,
regarding cython: FTBFS: ct_DEF.__test__.large_nums fails
to be marked as done.
42 matches
Mail list logo