Hi Kerstin,
On Tue, Feb 23, 2016 at 06:40:25PM +0100, Kerstin Hoef-Emden wrote:
> On Tue, 23 Feb 2016, Andreas Tille wrote:
>
> >We are talking about different things when talking about "manual install".
> >You can download the packages manually via wget
> >
> >
> >
Hi to all,
On Tue, 23 Feb 2016, Andreas Tille wrote:
We are talking about different things when talking about "manual install".
You can download the packages manually via wget
http://ftp.de.debian.org/debian/pool/main/s/staden/staden_2.0.0+b10-3_amd64.deb
Hi Kerstin,
On Tue, Feb 23, 2016 at 05:10:06PM +0100, Kerstin Hoef-Emden wrote:
> On Tue, 23 Feb 2016, Andreas Tille wrote:
> >
> >Kerstin, you can either download the staden packages from unstable from
> >here:
> >
> > https://packages.debian.org/source/unstable/staden
> >
> >and install
Hi to all,
On Tue, 23 Feb 2016, Andreas Tille wrote:
Kerstin, you can either download the staden packages from unstable from
here:
https://packages.debian.org/source/unstable/staden
and install manually on your Jessie system
I had a look at the requirements in the README.build file.
Hi James,
just to let you know that I moved the staden packaging from Debian
SVN to Git. You'll now find the patches we applied here:
https://anonscm.debian.org/cgit/debian-med/staden.git/tree/debian/patches
The rationale is that we have a better documented procedure for Git when
we are
On Mon, Feb 22, 2016 at 05:22:17PM +0100, Kerstin Hoef-Emden wrote:
> *** 2.0.0+b10-1.1 0
> 500 http://ftp.de.debian.org/debian/ jessie/main amd64 Packages
> 100 /var/lib/dpkg/status
Looking again: You need to install the package from Debian *unstable*.
The fixes do not
On Mon, Feb 22, 2016 at 04:34:13PM +0100, Andreas Tille wrote:
> if I understand you correctly you are suggesting a further change. Could
> you please confirm that this patch
>
>
>
On Mon, Feb 22, 2016 at 05:22:17PM +0100, Kerstin Hoef-Emden wrote:
>
> Hi to all,
>
> On Mon, 22 Feb 2016, Andreas Tille wrote:
>
> >Hmmm, lets hunt down this as well. Could you please write the output of
> >
> > apt-get policy staden
>
> You probably mean apt-cache policy staden?
Sorry,
Hi to all,
On Mon, 22 Feb 2016, Andreas Tille wrote:
Hmmm, lets hunt down this as well. Could you please write the output of
apt-get policy staden
You probably mean apt-cache policy staden?
khe@euler:~$ apt-cache policy staden
staden:
Installiert: 2.0.0+b10-1.1
On Mon, Feb 22, 2016 at 03:25:11PM +0100, Kerstin Hoef-Emden wrote:
>
> Hi to all,
>
> at what time intervals syncing takes place?
12h if you are lucky - 24h is safe.
> I just tried pregap for the fix
> of the missing links and it did not yet work.
Hmmm, lets hunt down this as well. Could
Hi James,
if I understand you correctly you are suggesting a further change. Could
you please confirm that this patch
https://anonscm.debian.org/viewvc/debian-med/trunk/packages/staden/trunk/debian/patches/cope_with_modern_windowmanager.patch?view=markup
is implementing your suggestion?
Hi to all,
at what time intervals syncing takes place? I just tried pregap for the
fix of the missing links and it did not yet work.
I tested uncommenting the line in the tcl-script of the contig editor
with a version downloaded from sourceforge and installed with stow and
the fix worked
On Mon, Feb 22, 2016 at 12:03:40PM +0100, Andreas Tille wrote:
> I've applied the suggested patch (which can be found in the packaging
> repository[1]).
I did manage to experiment with a few window managers, freezing my
desktop in the process :-).
All worked in as far as the editor was usable,
Hi James,
thanks a lot for the quick help.
On Mon, Feb 22, 2016 at 09:56:12AM +, James Bonfield wrote:
>
> Please try commenting out (#) the "wm resizable $w 1 0" line of the
> contig_editor procedure (approx line 111) in
> /usr/share/staden/tcl/gap/contig_editor.tcl.
I've applied the
Hello,
On Sat, Feb 20, 2016 at 01:40:25PM +0100, Kerstin Hoef-Emden wrote:
> Am 20.02.2016 um 08:33 schrieb Andreas Tille:
> > Hi Kerstin,
> >
> > thanks agein for your bug report. I agree that this problem might be a
> > bit more tricky than the other bug. I have a slight suspicion that this
On Sat, Feb 20, 2016 at 08:33:48AM +0100, Andreas Tille wrote:
> On Fri, Feb 19, 2016 at 06:56:36PM +0100, Kerstin Hoef-Emden wrote:
> > Package: staden
> > Version: 2.0.0+b10-1.1
> > Severity: grave
> > Justification: renders package unusable
> >
> > Dear Maintainer,
> >
> >
> > I loaded
Hi Kerstin,
On Sat, Feb 20, 2016 at 01:40:25PM +0100, Kerstin Hoef-Emden wrote:
> Am 20.02.2016 um 08:33 schrieb Andreas Tille:
> > Hi Kerstin,
> >
> > thanks agein for your bug report. I agree that this problem might be a
> > bit more tricky than the other bug. I have a slight suspicion that
Hi Andreas,
Am 20.02.2016 um 08:33 schrieb Andreas Tille:
> Hi Kerstin,
>
> thanks agein for your bug report. I agree that this problem might be a
> bit more tricky than the other bug. I have a slight suspicion that this
> user oriented issue might be connected to a later Tcl/Tk version than
>
Hi Kerstin,
thanks agein for your bug report. I agree that this problem might be a
bit more tricky than the other bug. I have a slight suspicion that this
user oriented issue might be connected to a later Tcl/Tk version than
you might have used before.
Since I feel unable to track this down I
Package: staden
Version: 2.0.0+b10-1.1
Severity: grave
Justification: renders package unusable
Dear Maintainer,
I loaded pregap-converted *.exp sequences into gap4 to do an assembly. The
assembly worked out, but I cannot open the contig editor for proofreading.
More correctly described: It
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