Source: itksnap Version: 3.6.0-1 Severity: serious Tags: buster sid User: debian...@lists.debian.org Usertags: qa-ftbfs-20170805 qa-ftbfs Justification: FTBFS on amd64
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER > -DvtkFiltersFlowPaths_AUTOINIT="1(vtkFiltersParallelFlowPaths)" > -DvtkIOExodus_AUTOINIT="1(vtkIOParallelExodus)" > -DvtkIOGeometry_AUTOINIT="1(vtkIOMPIParallel)" > -DvtkIOImage_AUTOINIT="1(vtkIOMPIImage)" > -DvtkIOParallel_AUTOINIT="1(vtkIOMPIParallel)" > -DvtkIOSQL_AUTOINIT="2(vtkIOMySQL,vtkIOPostgreSQL)" > -DvtkRenderingContext2D_AUTOINIT="1(vtkRenderingContextOpenGL)" > -DvtkRenderingCore_AUTOINIT="3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL)" > > -DvtkRenderingFreeType_AUTOINIT="2(vtkRenderingFreeTypeFontConfig,vtkRenderingMatplotlib)" > -DvtkRenderingLIC_AUTOINIT="1(vtkRenderingParallelLIC)" > -DvtkRenderingVolume_AUTOINIT="1(vtkRenderingVolumeOpenGL)" > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/ITKIOFactoryRegistration > -I/usr/include/hdf5/serial -I/usr/include/dcmtk/dcmseg > -I/usr/include/dcmtk/dcmfg -I/usr/include/dcmtk/dcmiod > -I/usr/include/dcmtk/dcmrt -I/usr/include/dcmtk/dcmpstat > -I/usr/include/dcmtk/dcmqrdb -I/usr/include/dcmtk/dcmwlm > -I/usr/include/dcmtk/dcmsign -I/usr/include/dcmtk/dcmsr > -I/usr/include/dcmtk/dcmnet -I/usr/include/dcmtk/dcmtls > -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/dcmjpeg > -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle > -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/oflog > -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/config > -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.6 > -I/usr/include/double-conversion -isystem /usr/include/ITK-4.10 > -I/usr/include/vtk-6.3 -I/usr/include/freetype2 > -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi > -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent > > -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/opal/mca/event/libevent2022/libevent/include > -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/include/python2.7 > -I/usr/include/hdf5/openmpi -I/usr/include/libxml2 -I/usr/include/jsoncpp > -I/usr/include/tcl -I/usr/lib/cmake/ITK-4.10/Utilities/zlib > -I/<<PKGBUILDDIR>>/Common -I/<<PKGBUILDDIR>>/Common/ITKExtras > -I/<<PKGBUILDDIR>>/Logic -I/<<PKGBUILDDIR>>/Logic/Common > -I/<<PKGBUILDDIR>>/Logic/Framework -I/<<PKGBUILDDIR>>/Logic/ImageWrapper > -I/<<PKGBUILDDIR>>/Logic/LevelSet -I/<<PKGBUILDDIR>>/Logic/Mesh > -I/<<PKGBUILDDIR>>/Logic/Preprocessing > -I/<<PKGBUILDDIR>>/Logic/Preprocessing/GMM > -I/<<PKGBUILDDIR>>/Logic/Preprocessing/Texture > -I/<<PKGBUILDDIR>>/Logic/RLEImage -I/<<PKGBUILDDIR>>/Logic/Slicing > -I/<<PKGBUILDDIR>>/Submodules/c3d/itkextras/RandomForest > -I/<<PKGBUILDDIR>>/Submodules/c3d/api > -I/<<PKGBUILDDIR>>/Submodules/greedy/src -I/<<PKGBUILDDIR>>/GUI > -I/<<PKGBUILDDIR>>/GUI/Model -I/<<PKGBUILDDIR>>/GUI/Renderer > -I/<<PKGBUILDDIR>>/GUI/Renderer/OrientationWidget/Reorient > -I/<<PKGBUILDDIR>>/GUI/Qt -I/<<PKGBUILDDIR>>/GUI/Qt/Components > -I/<<PKGBUILDDIR>>/GUI/Qt/Coupling -I/<<PKGBUILDDIR>>/GUI/Qt/External > -I/<<PKGBUILDDIR>>/GUI/Qt/External/ColorWheel > -I/<<PKGBUILDDIR>>/GUI/Qt/ModelView -I/<<PKGBUILDDIR>>/GUI/Qt/Testing > -I/<<PKGBUILDDIR>>/GUI/Qt/View -I/<<PKGBUILDDIR>>/GUI/Qt/Windows > -I/<<PKGBUILDDIR>>/GUI/Qt/Windows/MeshExportWizard > -I/<<PKGBUILDDIR>>/GUI/Qt/Windows/Registration > -I/<<PKGBUILDDIR>>/Testing/Logic -I/<<PKGBUILDDIR>>/Testing/GUI/Qt > -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/x86_64-linux-gnu/qt5 > -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets > -I/usr/include/x86_64-linux-gnu/qt5/QtGui > -I/usr/include/x86_64-linux-gnu/qt5/QtCore > -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 > -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL > -I/usr/include/x86_64-linux-gnu/qt5/QtConcurrent > -I/usr/include/x86_64-linux-gnu/qt5/QtQml > -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/gdcm-2.8 -g -O2 > -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat > -Werror=format-security -fPIC -funroll-loops -ftree-vectorize -Wdate-time > -D_FORTIFY_SOURCE=2 -o > CMakeFiles/iteratorTests.dir/Testing/Logic/itkImageIteratorsForwardBackwardTest.cxx.o > -c /<<PKGBUILDDIR>>/Testing/Logic/itkImageIteratorsForwardBackwardTest.cxx > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from /usr/include/ITK-4.10/itkLightProcessObject.h:21, > from /usr/include/ITK-4.10/itkImageIOBase.h:24, > from > /<<PKGBUILDDIR>>/Submodules/c3d/itkextras/VoxBoIO/itkVoxBoCUBImageIO.h:27, > from > /<<PKGBUILDDIR>>/Submodules/c3d/itkextras/VoxBoIO/itkVoxBoCUBImageIO.cxx:17: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vnl/vnl_matrix.h:40:0, > from > /<<PKGBUILDDIR>>/Submodules/greedy/src/GreedyParameters.h:32, > from /<<PKGBUILDDIR>>/Submodules/greedy/src/GreedyAPI.h:30, > from /<<PKGBUILDDIR>>/Submodules/greedy/src/GreedyAPI.cxx:27: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from /usr/include/ITK-4.10/itkCreateObjectFunction.h:21, > from /usr/include/ITK-4.10/itkObjectFactoryBase.h:31, > from > /<<PKGBUILDDIR>>/Submodules/c3d/itkextras/VoxBoIO/itkVoxBoCUBImageIOFactory.h:20, > from > /<<PKGBUILDDIR>>/Submodules/c3d/itkextras/VoxBoIO/itkVoxBoCUBImageIOFactory.cxx:17: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from /usr/include/ITK-4.10/itkRegion.h:31, > from /usr/include/ITK-4.10/itkImageRegion.h:31, > from /usr/include/ITK-4.10/itkImage.h:21, > from > /<<PKGBUILDDIR>>/Submodules/c3d/itkextras/itkOrientedRASImage.h:4, > from /<<PKGBUILDDIR>>/Submodules/c3d/ConvertImageND.h:29, > from /<<PKGBUILDDIR>>/Submodules/c3d/api/ConvertAPI.cxx:26: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vnl/vnl_matrix.h:40:0, > from > /<<PKGBUILDDIR>>/Submodules/greedy/src/GreedyParameters.h:32, > from > /<<PKGBUILDDIR>>/Submodules/greedy/src/GreedyParameters.cxx:27: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from /usr/include/ITK-4.10/itkRegion.h:31, > from /usr/include/ITK-4.10/itkImageRegion.h:31, > from /usr/include/ITK-4.10/itkImage.h:21, > from > /<<PKGBUILDDIR>>/Logic/RLEImage/RLEImageConstIterator.h:4, > from > /<<PKGBUILDDIR>>/Logic/RLEImage/RLEImageRegionConstIterator.h:4, > from > /<<PKGBUILDDIR>>/Logic/RLEImage/RLEImageRegionIterator.h:4, > from /<<PKGBUILDDIR>>/Testing/Logic/testRLE.cxx:1: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from /usr/include/ITK-4.10/itkRegion.h:31, > from /usr/include/ITK-4.10/itkImageRegion.h:31, > from /usr/include/ITK-4.10/itkImage.h:21, > from > /<<PKGBUILDDIR>>/Testing/Logic/SlicingPerformanceTest.cxx:7: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from /usr/include/ITK-4.10/itkCreateObjectFunction.h:21, > from /usr/include/ITK-4.10/itkObjectFactoryBase.h:31, > from > /<<PKGBUILDDIR>>/Submodules/c3d/itkextras/PovRayIO/itkPovRayDF3ImageIOFactory.h:20, > from > /<<PKGBUILDDIR>>/Submodules/c3d/itkextras/PovRayIO/itkPovRayDF3ImageIOFactory.cxx:17: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from /usr/include/ITK-4.10/itkLightProcessObject.h:21, > from /usr/include/ITK-4.10/itkImageIOBase.h:24, > from > /<<PKGBUILDDIR>>/Submodules/c3d/itkextras/PovRayIO/itkPovRayDF3ImageIO.h:27, > from > /<<PKGBUILDDIR>>/Submodules/c3d/itkextras/PovRayIO/itkPovRayDF3ImageIO.cxx:17: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /<<PKGBUILDDIR>>/Submodules/greedy/src/lddmm_data.h:31, > from > /<<PKGBUILDDIR>>/Submodules/greedy/src/lddmm_data.cxx:27: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from /usr/include/ITK-4.10/itkRegion.h:31, > from /usr/include/ITK-4.10/itkImageRegion.h:31, > from /usr/include/ITK-4.10/itkImage.h:21, > from /<<PKGBUILDDIR>>/Testing/Logic/itkIteratorTests.cxx:21: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from /usr/include/ITK-4.10/itkRegion.h:31, > from /usr/include/ITK-4.10/itkImageRegion.h:31, > from /usr/include/ITK-4.10/itkImage.h:21, > from > /<<PKGBUILDDIR>>/Logic/RLEImage/RLEImageConstIterator.h:4, > from > /<<PKGBUILDDIR>>/Logic/RLEImage/RLEImageRegionConstIterator.h:4, > from > /<<PKGBUILDDIR>>/Logic/RLEImage/RLEImageRegionIterator.h:4, > from > /<<PKGBUILDDIR>>/Testing/Logic/itkImageIteratorsForwardBackwardTest.cxx:21: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from /usr/include/ITK-4.10/itkDataObject.h:31, > from /usr/include/ITK-4.10/itkProcessObject.h:31, > from /usr/include/ITK-4.10/itkImageSource.h:31, > from /usr/include/ITK-4.10/itkImageToImageFilter.h:31, > from > /<<PKGBUILDDIR>>/Logic/RLEImage/RLERegionOfInterestImageFilter.h:4, > from > /<<PKGBUILDDIR>>/Testing/Logic/itkRegionOfInterestImageFilterTest.cxx:20: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > In file included from /usr/include/ITK-4.10/vcl_limits.h:5:0, > from /usr/include/ITK-4.10/itkNumericTraits.h:51, > from /usr/include/ITK-4.10/itkConceptChecking.h:32, > from /usr/include/ITK-4.10/itkAtomicInt.h:38, > from /usr/include/ITK-4.10/itkLightObject.h:25, > from /usr/include/ITK-4.10/itkObject.h:31, > from /usr/include/ITK-4.10/itkDataObject.h:31, > from /usr/include/ITK-4.10/itkImageBase.h:31, > from /<<PKGBUILDDIR>>/Logic/RLEImage/RLEImage.h:6, > from > /<<PKGBUILDDIR>>/Testing/Logic/itkImageIteratorTest.cxx:20: > /usr/include/ITK-4.10/vcl_compiler.h:79:4: error: #error "Dunno about this > gcc" > # error "Dunno about this gcc" > ^~~~~ > Submodules/greedy/CMakeFiles/greedyapi.dir/build.make:113: recipe for target > 'Submodules/greedy/CMakeFiles/greedyapi.dir/src/GreedyParameters.cxx.o' failed > make[3]: *** > [Submodules/greedy/CMakeFiles/greedyapi.dir/src/GreedyParameters.cxx.o] Error > 1 The full build log is available from: http://aws-logs.debian.net/2017/08/05/itksnap_3.6.0-1_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures.
