Re: automated CI on salsa to prepare MR for new upstream version

ions... we will see. Cheers, On Sat, 21 Jan 2023, Andrej Shadura wrote: > Hi, > On Fri, 20 Jan 2023, at 17:01, Yaroslav Halchenko wrote: > > Dear Debian gurus, > > Lazy me would love to get automation going akin to the one in > > conda-forge (see e.g. [1]) -- whenever a new

automated CI on salsa to prepare MR for new upstream version

Dear Debian gurus, Lazy me would love to get automation going akin to the one in conda-forge (see e.g. [1]) -- whenever a new upstream is released (as could be detected with a run of uscan) the CI would - would run uscan - get new source {tarball} - get new {uversion} (from uscan

Bug#1010897: ITP: python3-versioningit -- PEP 518 driven setuptools plugin for auto-versioning using git/hg

Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko X-Debbugs-Cc: debian-devel@lists.debian.org * Package name: python3-versioningit Version : 1.1.1 Upstream Author : John T. Wodder II * URL : https://github.com/jwodder/versioningit * License : MIT

Bug#1003290: ITP: mricrogl -- magnetic resonance image conversion, viewing and analysis

Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko X-Debbugs-Cc: debian-devel@lists.debian.org, Debian Med Packaging Team * Package name: mricrogl Version : 1.2.20211006 Upstream Author : Chris Rorden * URL : https://github.com/rordenlab/MRIcroGL * License

Accepted datalad 0.12.2-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 28 Jan 2020 09:46:50 -0500 Source: datalad Binary: datalad python3-datalad Architecture: source all Version: 0.12.2-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko

Bug#950095: ITP: pyout -- interface for writing structured records as a table in a terminal

Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko * Package name: pyout Version : 0.5.0 Upstream Author : Kyle Meyer * URL : https://github.com/pyout/pyout * License : MIT/X Programming Lang: Python Description : interface for writing

Accepted python-quantities 0.12.4-1 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 27 Jan 2020 20:34:29 -0500 Source: python-quantities Architecture: source Version: 0.12.4-1 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Yaroslav Halchenko Closes: 945260 Changes

Accepted datalad 0.12.1-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 15 Jan 2020 21:32:28 -0500 Source: datalad Binary: datalad python3-datalad Architecture: source all Version: 0.12.1-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko

Accepted datalad 0.12.0-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 11 Jan 2020 09:17:58 -0500 Source: datalad Binary: datalad python3-datalad Architecture: source all Version: 0.12.0-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko

Accepted connectome-workbench 1.4.2-1 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 09 Jan 2020 18:33:25 -0500 Source: connectome-workbench Architecture: source Version: 1.4.2-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Changes: connectome-workbench

Bug#948073: ITP: tedana -- TE-dependent analysis (tedana) of multi-echo fMRI

Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko * Package name: tedana Version : 0.0.8 Upstream Author : tedana developers * URL : https://github.com/ME-ICA/tedana * License : LGPL Programming Lang: Python Description : TE-dependent analysis

Accepted duecredit 0.7.0-3 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 18 Dec 2019 22:21:04 -0500 Source: duecredit Architecture: source Version: 0.7.0-3 Distribution: unstable Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko Closes: 936450 Changes: duecredit

Accepted duecredit 0.7.0-2 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 10 Dec 2019 23:18:30 -0500 Source: duecredit Architecture: source Version: 0.7.0-2 Distribution: unstable Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko Closes: 936450 Changes: duecredit

Accepted connectome-workbench 1.4.1-4 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 15 Nov 2019 11:29:31 -0500 Source: connectome-workbench Architecture: source Version: 1.4.1-4 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Changes: connectome-workbench

Accepted connectome-workbench 1.4.1-3 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 14 Nov 2019 09:58:37 -0500 Source: connectome-workbench Architecture: source Version: 1.4.1-3 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Changes: connectome-workbench

Accepted connectome-workbench 1.4.1-2 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 13 Nov 2019 23:17:53 -0500 Source: connectome-workbench Architecture: source Version: 1.4.1-2 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Changes: connectome-workbench

Accepted nibabel 2.5.1-1 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sun, 10 Nov 2019 18:09:36 -0500 Source: nibabel Architecture: source Version: 2.5.1-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Changes: nibabel (2.5.1-1) unstable

Accepted connectome-workbench 1.4.1-1 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 05 Nov 2019 20:32:34 -0500 Source: connectome-workbench Architecture: source Version: 1.4.1-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Changes: connectome-workbench

Accepted pynwb 0.5.1-2 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 18 Oct 2019 10:20:23 -0400 Source: pynwb Architecture: source Version: 0.5.1-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Yaroslav Halchenko Closes: 934868 Changes: pynwb

Accepted datalad 0.11.8-1 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 10 Oct 2019 21:32:17 -0400 Source: datalad Architecture: source Version: 0.11.8-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Changes: datalad (0.11.8-1) unstable

Accepted psychtoolbox-3 3.0.15.20190725.dfsg1-1 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 19 Sep 2019 16:17:11 -0400 Source: psychtoolbox-3 Architecture: source Version: 3.0.15.20190725.dfsg1-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Closes: 801652 883348

Bug#940625: ITP: diskcache -- Python module for Disk and file backed persistent cache

Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko * Package name: diskcache Version : 4.0.0 Upstream Author : Grant Jenks * URL : http://www.grantjenks.com/docs/diskcache/ * License : Apache-2.0 Programming Lang: Python Description : Python

Bug#940622: ITP: girder-client -- Python libraries and a command-line tool to interact with a Girder server

Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko * Package name: girder-client Version : 3.0.3 Upstream Author : Girder Team * URL : https://girder.readthedocs.io/en/latest/python-client.html * License : Apache-2.0 Programming Lang: Python

Accepted neo 0.7.2-2 (source) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 17 Sep 2019 12:03:42 -0400 Source: neo Architecture: source Version: 0.7.2-2 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Closes: 940314 Changes: neo (0.7.2-2) unstable

Accepted neo 0.7.2-1 (source all) into unstable, unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sun, 01 Sep 2019 13:48:55 +0200 Source: neo Binary: python3-neo Architecture: source all Version: 0.7.2-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Description: python3

Accepted datalad 0.11.7-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 02 Sep 2019 09:18:59 +0200 Source: datalad Binary: datalad python3-datalad Architecture: source all Version: 0.11.7-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko

Accepted python-quantities 0.12.3-1 (source all) into unstable, unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sun, 01 Sep 2019 14:12:15 +0200 Source: python-quantities Binary: python3-quantities Architecture: source all Version: 0.12.3-1 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Yaroslav

Accepted bats 1.1.0+git104-g1c83a1b-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 06 Aug 2019 11:52:32 -0400 Source: bats Binary: bats Architecture: source all Version: 1.1.0+git104-g1c83a1b-1 Distribution: unstable Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko Description

Accepted python-bids-validator 1.2.4-1 (source all) into unstable, unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 01 Aug 2019 09:59:53 -0400 Source: python-bids-validator Binary: python3-bids-validator Architecture: source all Version: 1.2.4-1 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team Changed-By: Yaroslav

Accepted datalad-container 0.5.0-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 12 Aug 2019 11:38:05 -0400 Source: datalad-container Binary: datalad-container Architecture: source all Version: 0.5.0-1 Distribution: unstable Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko

Accepted bats 1.1.0-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 06 Aug 2019 11:47:09 -0400 Source: bats Binary: bats Architecture: source all Version: 1.1.0-1 Distribution: unstable Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko Description: bats

Accepted nibabel 2.5.0-1 (source all) into unstable

-By: Yaroslav Halchenko Description: python-nibabel - Python bindings to various neuroimaging data formats python-nibabel-doc - documentation for NiBabel python3-nibabel - Python3 bindings to various neuroimaging data formats Changes: nibabel (2.5.0-1) unstable; urgency=medium . * Fresh 2.5.0

Bug#933660: ITP: python-bids-validator -- validator for the Brain Imaging Data Structure (BIDS) datasets

Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko * Package name: python-bids-validator Version : 1.2.4 Upstream Author : bids-validator Team * URL : https://github.com/bids-standard/bids-validator * License : MIT/X Programming Lang: Python

Accepted datalad 0.11.6-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 29 Jul 2019 12:07:25 -0400 Source: datalad Binary: datalad python-datalad python3-datalad Architecture: source all Version: 0.11.6-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav

Bug#932903: ITP: python-hdmf -- high-level Python API for specifying, reading, writing and manipulating hierarchical object data

Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko * Package name: python-hdmf Version : 1.0.5 Upstream Author : HDMF Team (https://github.com/hdmf-dev/hdmf/graphs/contributors) * URL : https://github.com/hdmf-dev/hdmf/ * License : BSD-3 Programming

Accepted nibabel 2.4.1-1 (source all) into experimental

-By: Yaroslav Halchenko Description: python-nibabel - Python bindings to various neuroimaging data formats python-nibabel-doc - documentation for NiBabel python3-nibabel - Python3 bindings to various neuroimaging data formats Changes: nibabel (2.4.1-1) experimental; urgency=medium . * Fresh

Accepted datalad 0.11.5-1 (source all) into experimental

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 24 May 2019 07:31:33 -0400 Source: datalad Binary: datalad python-datalad python3-datalad Architecture: source all Version: 0.11.5-1 Distribution: experimental Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav

Accepted heudiconv 0.5.4-1 (source all) into experimental

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 10 May 2019 13:05:22 -0400 Source: heudiconv Binary: heudiconv Architecture: source all Version: 0.5.4-1 Distribution: experimental Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Description

Accepted neurodebian 0.39.0 (source all) into unstable

Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Description: neurodebian - neuroscience-oriented distribution - repository configuration neurodebian-archive-keyring - neuroscience-oriented distribution - GnuPG archive keys neurodebian-desktop

Accepted joblib 0.13.2-1 (source all) into experimental

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 15 Apr 2019 11:00:01 -0400 Source: joblib Binary: python-joblib python3-joblib Architecture: source all Version: 0.13.2-1 Distribution: experimental Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav

Accepted joblib 0.13.0-2 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 12 Apr 2019 10:54:23 -0400 Source: joblib Binary: python-joblib python3-joblib Architecture: source all Version: 0.13.0-2 Distribution: unstable Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko

Accepted psychtoolbox-3 3.0.15.20190401.dfsg1-1 (source amd64 all) into experimental

: experimental Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Description: octave-psychtoolbox-3 - toolbox for vision research -- Octave bindings psychtoolbox-3-common - toolbox for vision research -- arch/interpreter independent part psychtoolbox-3-dbg - toolbox for vision

Accepted nibabel 2.4.0-1 (source all) into experimental

-By: Yaroslav Halchenko Description: python-nibabel - Python bindings to various neuroimaging data formats python-nibabel-doc - documentation for NiBabel python3-nibabel - Python3 bindings to various neuroimaging data formats Changes: nibabel (2.4.0-1) experimental; urgency=medium . * Fresh

Accepted datalad 0.11.4-1 (source all) into experimental

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 04 Apr 2019 23:02:00 -0400 Source: datalad Binary: datalad python-datalad python3-datalad Architecture: source all Version: 0.11.4-1 Distribution: experimental Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav

Accepted nipype 1.1.9-1 (source all) into experimental

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 14 Mar 2019 22:40:32 -0400 Source: nipype Binary: python-nipype python-nipype-doc Architecture: source all Version: 1.1.9-1 Distribution: experimental Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav

Accepted datalad-container 0.3.1-1 (source all) into experimental

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 06 Mar 2019 10:09:17 -0500 Source: datalad-container Binary: datalad-container Architecture: source all Version: 0.3.1-1 Distribution: experimental Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko

Accepted duecredit 0.7.0-1 (source all) into experimental

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 01 Mar 2019 13:10:33 -0500 Source: duecredit Binary: python-duecredit python3-duecredit Architecture: source all Version: 0.7.0-1 Distribution: experimental Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav

Accepted nitime 0.7-2 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 21 Feb 2019 12:50:06 -0500 Source: nitime Binary: python-nitime python-nitime-doc Architecture: source all Version: 0.7-2 Distribution: unstable Urgency: high Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko

Accepted datalad 0.11.3-1 (source all) into experimental

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 19 Feb 2019 12:06:41 -0500 Source: datalad Binary: datalad python-datalad python3-datalad Architecture: source all Version: 0.11.3-1 Distribution: experimental Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav

Accepted datalad 0.11.2-2 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 08 Feb 2019 14:32:00 -0500 Source: datalad Binary: datalad python-datalad python3-datalad Architecture: source all Version: 0.11.2-2 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav

Accepted datalad 0.11.2-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 06 Feb 2019 23:20:28 -0500 Source: datalad Binary: datalad python-datalad python3-datalad Architecture: source all Version: 0.11.2-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav

Accepted psychtoolbox-3 3.0.15.20190207.dfsg1-1 (source amd64 all) into unstable

: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Description: octave-psychtoolbox-3 - toolbox for vision research -- Octave bindings psychtoolbox-3-common - toolbox for vision research -- arch/interpreter independent part psychtoolbox-3-dbg - toolbox for vision

Accepted psychtoolbox-3 3.0.15.20181125.dfsg1-2 (source amd64 all) into unstable

: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Description: octave-psychtoolbox-3 - toolbox for vision research -- Octave bindings psychtoolbox-3-common - toolbox for vision research -- arch/interpreter independent part psychtoolbox-3-dbg - toolbox for vision

Accepted neurodebian 0.38.3 (source all) into unstable

Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Description: neurodebian - neuroscience-oriented distribution - repository configuration neurodebian-archive-keyring - neuroscience-oriented distribution - GnuPG archive keys neurodebian-desktop

Accepted psychtoolbox-3 3.0.15.20181125.dfsg1-1 (source amd64 all) into unstable

: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Description: octave-psychtoolbox-3 - toolbox for vision research -- Octave bindings psychtoolbox-3-common - toolbox for vision research -- arch/interpreter independent part psychtoolbox-3-dbg - toolbox for vision

Accepted nipype 1.1.8-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sun, 03 Feb 2019 19:16:00 -0500 Source: nipype Binary: python-nipype python-nipype-doc Architecture: source all Version: 1.1.8-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko

Accepted mrtrix3 3.0~rc3+git135-g2b8e7d0c2-3 (source amd64 all) into unstable

-By: Yaroslav Halchenko Description: mrtrix3- diffusion-weighted MRI white matter tractography mrtrix3-doc - documentation for mrtrix3 Closes: 916775 Changes: mrtrix3 (3.0~rc3+git135-g2b8e7d0c2-3) unstable; urgency=medium . * Clean up *.py? files upon install * debian/control, debian

Accepted datalad-container 0.2.2-2 (source all) into unstable, unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 14 Jan 2019 11:52:19 -0500 Source: datalad-container Binary: datalad-container Architecture: source all Version: 0.2.2-2 Distribution: unstable Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko

Accepted heudiconv 0.5.3-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 12 Jan 2019 09:54:18 -0500 Source: heudiconv Binary: heudiconv Architecture: source all Version: 0.5.3-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Description

Bug#919003: ITP: grabbit -- get grabby with file trees

Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko * Package name: grabbit Version : 0.2.6 Upstream Author : Tal Yarkoni and a team * URL : https://github.com/grabbles/grabbit/ * License : MIT/X code with GPL external Programming Lang: Python

Accepted nipy 0.4.2-2 (source all amd64) into unstable

Team Changed-By: Yaroslav Halchenko Description: python-nipy - Analysis of structural and functional neuroimaging data python-nipy-doc - documentation and examples for NiPy python-nipy-lib - Analysis of structural and functional neuroimaging data python-nipy-lib-dbg - Analysis of structural

Bug#918924: ITP: datalad-container -- DataLad extension for working with containerized environments

Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko * Package name: datalad-container Version : 0.2.2 Upstream Author : DataLad Team * URL : http://www.datalad.org * License : Expat Programming Lang: Python Description : DataLad extension

Accepted nibabel 2.3.2-1 (source all) into unstable

-By: Yaroslav Halchenko Description: python-nibabel - Python bindings to various neuroimaging data formats python-nibabel-doc - documentation for NiBabel python3-nibabel - Python3 bindings to various neuroimaging data formats Changes: nibabel (2.3.2-1) unstable; urgency=medium . * Fresh upstream

Accepted heudiconv 0.5.2-1 (source all) into unstable, unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 04 Jan 2019 10:35:47 -0500 Source: heudiconv Binary: heudiconv Architecture: source all Version: 0.5.2-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Description

Accepted nibabel 2.3.1+git51-g1ea7c30f-1 (source all) into unstable

Changed-By: Yaroslav Halchenko Description: python-nibabel - Python bindings to various neuroimaging data formats python-nibabel-doc - documentation for NiBabel python3-nibabel - Python3 bindings to various neuroimaging data formats Closes: 917680 Changes: nibabel (2.3.1+git51-g1ea7c30f-1

Accepted scikit-learn 0.20.1+dfsg-1 (source all amd64) into unstable

Urgency: medium Maintainer: Debian Science Team Changed-By: Yaroslav Halchenko Description: python-sklearn - Python modules for machine learning and data mining python-sklearn-doc - documentation and examples for scikit-learn python-sklearn-lib - low-level implementations and bindings for scikit

Accepted joblib 0.13.0-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 28 Nov 2018 20:45:46 -0500 Source: joblib Binary: python-joblib python3-joblib Architecture: source all Version: 0.13.0-1 Distribution: unstable Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko

Accepted datalad 0.11.1-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 26 Nov 2018 09:03:36 -0500 Source: datalad Binary: datalad python-datalad python3-datalad Architecture: source all Version: 0.11.1-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav

Accepted pydicom 1.2.1-1 (source all) into unstable

: NeuroDebian Team Changed-By: Yaroslav Halchenko Description: python-dicom - transitional package for python-pydicom python-pydicom - DICOM medical file reading and writing (Python 2) python-pydicom-doc - DICOM medical file reading and writing (documentation) python3-dicom - transitional package

Accepted mrtrix3 3.0~rc3+git86-g4b523b413-1 (source amd64 all) into unstable, unstable

-By: Yaroslav Halchenko Description: mrtrix3- diffusion-weighted MRI white matter tractography mrtrix3-doc - documentation for mrtrix3 Closes: 907978 Changes: mrtrix3 (3.0~rc3+git86-g4b523b413-1) unstable; urgency=medium . * Initial packaging based on mrtrix package (Closes: #907978

Accepted neurodebian 0.38.2 (source all) into unstable

Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Description: neurodebian - neuroscience-oriented distribution - repository configuration neurodebian-archive-keyring - neuroscience-oriented distribution - GnuPG archive keys neurodebian-desktop

Accepted neurodebian 0.38.1 (source all) into unstable, unstable

Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko Description: neurodebian - neuroscience-oriented distribution - repository configuration neurodebian-archive-keyring - neuroscience-oriented distribution - GnuPG archive keys neurodebian-desktop

Accepted scikit-learn 0.20.0+dfsg-2 (source all amd64) into unstable

Urgency: medium Maintainer: Debian Science Team Changed-By: Yaroslav Halchenko Description: python-sklearn - Python modules for machine learning and data mining python-sklearn-doc - documentation and examples for scikit-learn python-sklearn-lib - low-level implementations and bindings for scikit

Accepted dcmstack 0.7-1 (source all) into unstable, unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 15 Oct 2018 16:48:07 -0400 Source: dcmstack Binary: python-dcmstack python3-dcmstack Architecture: source all Version: 0.7-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko

Accepted patsy 0.5.0+git13-g54dcf7b-1 (source all) into unstable

-By: Yaroslav Halchenko Description: python-patsy - statistical models in Python using symbolic formulas python-patsy-doc - documentation and examples for patsy python3-patsy - statistical models in Python using symbolic formulas Closes: 907335 Changes: patsy (0.5.0+git13-g54dcf7b-1) unstable

Accepted joblib 0.12.5-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 27 Oct 2018 20:54:08 -0400 Source: joblib Binary: python-joblib python3-joblib Architecture: source all Version: 0.12.5-1 Distribution: unstable Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko

Accepted datalad 0.11.0-1 (source all) into unstable

] * Move source package lintian overrides to debian/source. . [ Yaroslav Halchenko ] * New upstream release - requires git-annex >= 6.20180913 Checksums-Sha1: 7ee9e6bfc57ac836734f3ea66dc14512283991fb 3316 datalad_0.11.0-1.dsc 94a96776f3d8e0bccea04cd080e93f66d71a15de 1253241 datalad_0.1

Accepted nibabel 2.3.1-1 (source all) into unstable

-By: Yaroslav Halchenko Description: python-nibabel - Python bindings to various neuroimaging data formats python-nibabel-doc - documentation for NiBabel python3-nibabel - Python3 bindings to various neuroimaging data formats Closes: 909990 Changes: nibabel (2.3.1-1) unstable; urgency=medium

Accepted nipype 1.1.3-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 08 Oct 2018 10:57:16 -0400 Source: nipype Binary: python-nipype python-nipype-doc Architecture: source all Version: 1.1.3-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko

Accepted sympy 1.3-1 (source all) into unstable

Maintainers Changed-By: Yaroslav Halchenko Description: isympy-common - Python shell for SymPy isympy3- Python3 shell for SymPy python-sympy - Computer Algebra System (CAS) in Python python-sympy-doc - Computer Algebra System (CAS) in Python - Documentation python3-sympy - Computer Algebra

Accepted pynwb 0.5.1-1 (source all) into unstable, unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 20 Sep 2018 01:19:06 -0400 Source: pynwb Binary: python-pynwb python3-pynwb Architecture: source all Version: 0.5.1-1 Distribution: unstable Urgency: low Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko

Accepted datalad 0.10.3.1-1 (source all) into unstable

] * Use secure URI in Vcs control header. . [ Yaroslav Halchenko ] * Emergency upstream bugfix release with correct version assigned Checksums-Sha1: 2b7ad3834e84476c16656a8e0ce4c9276e0ee82a 3327 datalad_0.10.3.1-1.dsc 06f754bd92ac7b021fe59c062a37c65b54f70b99 1242404 datalad_0.10.3.1

Accepted datalad 0.10.3-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 12 Sep 2018 14:14:31 -0400 Source: datalad Binary: datalad python-datalad python3-datalad Architecture: source all Version: 0.10.3-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav

Bug#908531: ITP: pynwb -- Python library for working with Neurodata in the NWB format

Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko * Package name: pynwb Version : 0.4.1 Upstream Author : PyNWB Team * URL : https://github.com/NeurodataWithoutBorders/pynwb * License : BSD-3 with additional statement Programming Lang: Python

Accepted reprozip 1.0.14-2 (source amd64 all) into unstable

Changed-By: Yaroslav Halchenko Description: python3-reprozip - modules for the ReproZip packer python3-reprozip-dbg - debug extensions for the ReproZip packer reprozip - tool for reproducing scientific experiments (packer) Changes: reprozip (1.0.14-2) unstable; urgency=medium . * Use

Accepted joblib 0.12.3-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 04 Sep 2018 12:42:16 -0400 Source: joblib Binary: python-joblib python3-joblib Architecture: source all Version: 0.12.3-1 Distribution: unstable Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko

Bug#907978: ITP: mrtrix3 -- diffusion-weighted MRI white matter tractography

Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko * Package name: mrtrix3 Version : 3.0~rc3+git86-g4b523b413 Upstream Author : Mrtrix3 Team * URL : http://www.mrtrix3.org * License : GPL-3 Programming Lang: C++ Description : diffusion-weighted

Accepted reprozip 1.0.14-1 (source amd64 all) into unstable

Changed-By: Yaroslav Halchenko Description: python3-reprozip - modules for the ReproZip packer python3-reprozip-dbg - debug extensions for the ReproZip packer reprozip - tool for reproducing scientific experiments (packer) Changes: reprozip (1.0.14-1) unstable; urgency=medium . * New

Accepted connectome-workbench 1.3.2-1 (source amd64) into unstable

Changed-By: Yaroslav Halchenko Description: connectome-workbench - brain visualization, analysis and discovery tool connectome-workbench-dbg - brain visualization, analysis and discovery tool -- debug symbols Changes: connectome-workbench (1.3.2-1) unstable; urgency=medium . * Fresh upstream

Accepted joblib 0.12.2-2 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 28 Aug 2018 23:51:42 -0400 Source: joblib Binary: python-joblib python3-joblib Architecture: source all Version: 0.12.2-2 Distribution: unstable Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko

Accepted mrtrix 0.2.13-1 (source amd64 all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 24 Aug 2018 17:32:48 -0400 Source: mrtrix Binary: mrtrix mrtrix-doc Architecture: source amd64 all Version: 0.2.13-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko

Accepted joblib 0.12.2-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 21 Aug 2018 13:33:07 -0400 Source: joblib Binary: python-joblib python3-joblib Architecture: source all Version: 0.12.2-1 Distribution: unstable Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko

Accepted nipype 1.1.1-2 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 09 Aug 2018 14:26:03 -0400 Source: nipype Binary: python-nipype python-nipype-doc Architecture: source all Version: 1.1.1-2 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko

Accepted nipype 1.1.1-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 03 Aug 2018 13:00:43 -0400 Source: nipype Binary: python-nipype python-nipype-doc Architecture: source all Version: 1.1.1-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav Halchenko

Accepted datalad 0.10.2-2 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 02 Aug 2018 13:58:11 -0400 Source: datalad Binary: datalad python-datalad python3-datalad Architecture: source all Version: 0.10.2-2 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Yaroslav

Accepted singularity-container 2.5.2-2 (source amd64) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 10 Jul 2018 14:41:56 -0400 Source: singularity-container Binary: singularity-container Architecture: source amd64 Version: 2.5.2-2 Distribution: unstable Urgency: medium Maintainer: Debian HPC Team Changed-By: Yaroslav

Accepted tigervnc 1.9.0+dfsg-1 (source amd64) into unstable

: unstable Urgency: high Maintainer: TigerVNC Packaging Team Changed-By: Yaroslav Halchenko Description: tigervnc-common - Virtual network computing; Common software needed by servers tigervnc-scraping-server - Virtual network computing server performing X screen scraping tigervnc-standalone

Accepted pandas 0.23.3-1 (source all amd64) into unstable

Maintainer: Debian Science Team Changed-By: Yaroslav Halchenko Description: python-pandas - data structures for "relational" or "labeled" data python-pandas-doc - documentation and examples for pandas python-pandas-lib - low-level implementations and bindings for pandas p

Accepted vowpal-wabbit 8.6.1.dfsg1-1 (source amd64 all) into unstable

Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko Description: libvw-dev - fast and scalable online machine learning algorithm - development libvw0 - fast and scalable online machine learning algorithm - dynamic lib vowpal-wabbit - fast and scalable online machine learning algorithm

Accepted joblib 0.12.1-1 (source all) into unstable

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Fri, 27 Jul 2018 19:34:47 -0400 Source: joblib Binary: python-joblib python3-joblib Architecture: source all Version: 0.12.1-1 Distribution: unstable Urgency: medium Maintainer: Yaroslav Halchenko Changed-By: Yaroslav Halchenko

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