Bug#680539: ITP: hmmer2 -- profile hidden Markov models for protein sequence analysis (version 2)

2012-07-06 Thread Laszlo Kajan
Package: wnpp Severity: wishlist Owner: Laszlo Kajan lka...@rostlab.org -BEGIN PGP SIGNED MESSAGE- Hash: SHA1 * Package name: hmmer2 Version : 2.3.2 Upstream Author : Sean Eddy e...@genetics.wustl.edu * URL : ftp://selab.janelia.org/pub/software/hmmer/ *

Re: Bug#680539: ITP: hmmer2 -- profile hidden Markov models for protein sequence analysis (version 2)

2012-07-06 Thread Joachim Wiedorn
Hello, Laszlo Kajan wrote on 2012-07-06 18:47: HMMER is an implementation of profile hidden Markov model methods for sensitive searches of biological sequence databases using multiple sequence alignments as queries. Which software/packages do you use together with this package? Is there

Re: Bug#680539: ITP: hmmer2 -- profile hidden Markov models for protein sequence analysis (version 2)

2012-07-06 Thread Bastian Blank
On Fri, Jul 06, 2012 at 07:43:41PM +0200, Joachim Wiedorn wrote: Laszlo Kajan wrote on 2012-07-06 18:47: HMMER is an implementation of profile hidden Markov model methods for sensitive searches of biological sequence databases using multiple sequence alignments as queries. Is there a