Accepted mime-support 3.64 (source) into unstable

2019-10-08 Thread Charles Plessy
-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sun, 06 Oct 2019 22:11:08 +0900 Source: mime-support Architecture: source Version: 3.64 Distribution: unstable Urgency: medium Maintainer: Mime-Support Packagers Changed-By: Charles Plessy Closes: 939226 939587 Changes: mime

Making mailcap optional ?

2019-08-14 Thread Charles Plessy
a day or two to let your thoughts mature). Have a nice day, Charles -- Charles Plessy Akano, Uruma, Okinawa, Japan

Accepted mime-support 3.63 (source) into unstable

2019-08-10 Thread Charles Plessy
-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sun, 11 Aug 2019 08:53:20 +0900 Source: mime-support Architecture: source Version: 3.63 Distribution: unstable Urgency: medium Maintainer: Mime-Support Packagers Changed-By: Charles Plessy Closes: 783195 803729 927300 931300

Re: tag2upload (git-debpush) service architecture - draft

2019-08-03 Thread Charles Plessy
? Have a nice day, Charles -- Charles Plessy Akano, Uruma, Okinawa, Japan Debian Med packaging team http://www.debian.org/devel/debian-med Tooting from work, https://mastodon.technology/@charles_plessy Tooting from home, https

Accepted bedtools 2.27.1+dfsg-4 (source) into unstable

2019-02-14 Thread Charles Plessy
-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Thu, 14 Feb 2019 22:11:21 +0900 Source: bedtools Binary: bedtools bedtools-test Architecture: source Version: 2.27.1+dfsg-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Charles Plessy

Accepted perlprimer 1.2.4-1 (source) into unstable

2019-02-13 Thread Charles Plessy
-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Wed, 13 Feb 2019 21:28:09 +0900 Source: perlprimer Binary: perlprimer perlprimer-doc Architecture: source Version: 1.2.4-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Charles Plessy

Accepted mime-support 3.62 (source) into unstable

2019-02-09 Thread Charles Plessy
-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sat, 09 Feb 2019 21:32:33 +0900 Source: mime-support Binary: mime-support Architecture: source Version: 3.62 Distribution: unstable Urgency: medium Maintainer: Mime-Support Packagers Changed-By: Charles Plessy Description: mime

Re: Proposal: Repository for fast-paced package backports

2019-01-02 Thread Charles Plessy
sheds") for solving your own problem :) Have a nice day, Charles -- Charles Plessy Tsurumi, Kanagawa, Japan Debian Med packaging team http://www.debian.org/devel/debian-med Tooting from work, https://mastodon.technology/@charles_plessy Tootin

Accepted euca2ools 3.3.1-2 (source all) into unstable

2018-07-01 Thread Charles Plessy
-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Mon, 02 Jul 2018 07:35:23 +0900 Source: euca2ools Binary: euca2ools Architecture: source all Version: 3.3.1-2 Distribution: unstable Urgency: medium Maintainer: Debian Cloud team Changed-By: Charles Plessy Description: euca2ools

Accepted mime-support 3.61 (source all) into unstable

2018-06-16 Thread Charles Plessy
-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sat, 16 Jun 2018 17:55:26 +0900 Source: mime-support Binary: mime-support Architecture: source all Version: 3.61 Distribution: unstable Urgency: medium Maintainer: Mime-Support Packagers Changed-By: Charles Plessy Description

Accepted solvate 1.0-2 (source amd64 all) into unstable, unstable

2018-06-06 Thread Charles Plessy
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 22 Mar 2008 11:32:31 +0900 Source: solvate Binary: solvate solvate-doc Architecture: source amd64 all Version: 1.0-2 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team Changed-By: Charles Plessy

Accepted libtfbs-perl 0.7.1-1 (source amd64) into unstable

2017-10-20 Thread Charles Plessy
kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: libtfbs-perl - scanning DNA sequence with a position weight matrix Changes: libtfbs-perl (0.7.1-1) unstable; urgency=medium . * New upstream version 0.7.1 * d/copyright, d/watch: Stop repacking upstream sou

Accepted last-align 885-1 (source) into unstable

2017-10-15 Thread Charles Plessy
org> Changed-By: Charles Plessy <ple...@debian.org> Description: last-align - genome-scale comparison of biological sequences Changes: last-align (885-1) unstable; urgency=medium . * New upstream version 885 * debian/rules: re-enable multi-threading. * debian/control: build-depe

Accepted r-cran-pheatmap 1.0.8-2 (source) into unstable

2017-10-02 Thread Charles Plessy
kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: r-cran-pheatmap - GNU R package to create pretty heatmaps Changes: r-cran-pheatmap (1.0.8-2) unstable; urgency=medium . * Team upload. * Rebuild for the r-base-3.4 transition. * Moved packaging fro

Accepted bedtools 2.26.0+dfsg-5 (source) into unstable

2017-09-26 Thread Charles Plessy
kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: bedtools - suite of utilities for comparing genomic features bedtools-test - test data for the bedtools package Closes: 876802 Changes: bedtools (2.26.0+dfsg-5) unstable; urgency=medium

Accepted bedtools 2.26.0+dfsg-4 (source) into unstable

2017-09-25 Thread Charles Plessy
kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: bedtools - suite of utilities for comparing genomic features bedtools-test - test data for the bedtools package Changes: bedtools (2.26.0+dfsg-4) unstable; urgency=medium . [ Andreas Tille ] * Fix

Accepted pvclust 2.0-0-2 (source) into unstable

2017-09-24 Thread Charles Plessy
kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: r-cran-pvclust - Hierarchical Clustering with P-Values via Multiscale Bootstrap Changes: pvclust (2.0-0-2) unstable; urgency=medium . * Team upload * Rebuild for r-api-3.4. * cme fix dpkg-control (VCS fi

Accepted perlprimer 1.2.3-1 (source all) into unstable

2017-01-22 Thread Charles Plessy
kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: perlprimer - Graphical design of primers for PCR perlprimer-doc - Tutorial to perlprimer Closes: 708477 Changes: perlprimer (1.2.3-1) unstable; urgency=medium . 00b28ba New upstream version 1.2.3, clo

Accepted bedtools 2.26.0+dfsg-3 (source) into unstable

2016-11-07 Thread Charles Plessy
kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: bedtools - suite of utilities for comparing genomic features bedtools-test - test data for the bedtools package Closes: 831833 Changes: bedtools (2.26.0+dfsg-3) unstable; urgency=medium .

Accepted euca2ools 3.3.1-1 (source all) into unstable

2016-10-22 Thread Charles Plessy
ain...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: euca2ools - tools for interacting with AWS API-compatible services Closes: 841480 Changes: euca2ools (3.3.1-1) unstable; urgency=medium . d271cb9 Merge tag 'v3.3.1'. Closes: #841480. LP: #1527341. 3f4

Accepted bedtools 2.26.0+dfsg-1 (source amd64 all) into unstable

2016-07-18 Thread Charles Plessy
kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: bedtools - suite of utilities for comparing genomic features bedtools-test - test data for the bedtools package Closes: 805998 Changes: bedtools (2.26.0+dfsg-1) unstable; urgency=medium .

Accepted last-align 746-1 (source amd64) into unstable

2016-07-14 Thread Charles Plessy
kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: last-align - genome-scale comparison of biological sequences Changes: last-align (746-1) unstable; urgency=medium . * New upstream version Checksums-Sha1: e0146cea3fb7c184c7be6abb17630a12d88713e8 1967 last-ali

Accepted samtools 1.3.1-2 (source) into unstable

2016-05-08 Thread Charles Plessy
kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: samtools - processing sequence alignments in SAM and BAM formats samtools-test - test files for the samtools package Closes: 822701 Changes: samtools (1.3.1-2) unstable; urgency=medium . 952da10 Build-depen

Accepted mime-support 3.60 (source) into unstable

2016-05-01 Thread Charles Plessy
-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sun, 01 May 2016 20:20:22 +0900 Source: mime-support Binary: mime-support Architecture: source Version: 3.60 Distribution: unstable Urgency: medium Maintainer: Mime-Support Maintainers <mime-supp...@plessy.org> Changed-By: C

Accepted samtools 1.3.1-1 (source) into unstable

2016-04-26 Thread Charles Plessy
kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: samtools - processing sequence alignments in SAM and BAM formats samtools-test - test files for the samtools package Changes: samtools (1.3.1-1) unstable; urgency=medium . 0c961b2 Merge tag '1.3.1' into deb

Accepted htslib 1.3.1-1 (source) into unstable

2016-04-25 Thread Charles Plessy
kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: htslib-test - Test data for HTSlib libhts-dev - Development files for the HTSlib libhts1- C library for high-throughput sequencing data formats tabix - generic indexer for TAB-delimited gen

Accepted libbio-samtools-perl 1.43-1 (source amd64) into unstable

2016-02-20 Thread Charles Plessy
ain...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: libbio-samtools-perl - Perl interface to SamTools library for DNA sequencing Changes: libbio-samtools-perl (1.43-1) unstable; urgency=medium . [ Charles Plessy ] dd47de5 Imported Upstream

Re: Debian, les versions et le noyau

2016-02-03 Thread Charles Plessy
i386 linux-image-amd64 | 4.3+70~bpo8+1 | jessie-backports | amd64 linux-image-amd64 | 4.3+70 | stretch | amd64 linux-image-amd64 | 4.3+70 | sid | amd64 Regarde-voir du côté de backports.debian.org. Amicalement, Charles -- Charles Plessy Tsurumi, Kanagawa, Japan

Re: AppStream / DEP-11 support now available in the Debian archive

2015-12-14 Thread Charles Plessy
Hi Matthias, congratulation for this release ! In the upstream-metadata project (https://wiki.debian.org/UpstreamMetadata) we document some information, some of which is redundant with what is now found in AppStream, and some of which is not. For example, we document bibliographic reference to

Re: tracker.debian.org replaces packages.qa.debian.org for email subscriptions

2015-12-09 Thread Charles Plessy
(Please Cc me; I am not subscribed to -devel currently.) Charles -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan

Accepted staden-io-lib 1.14.3-1 (source amd64 all) into unstable

2015-10-01 Thread Charles Plessy
Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: libstaden-read-dev - development files for libstaden-read libstaden-read11 - Staden library for reading and writing DNA sequencing result

Accepted transrate-tools 1.0.0-1 (source amd64) into unstable, unstable

2015-10-01 Thread Charles Plessy
kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: transrate-tools - helper for transrate Closes: 800412 Changes: transrate-tools (1.0.0-1) unstable; urgency=low . * Team upload. . [ Michael R. Crusoe ] * Initial release (Closes: #800412) Ch

Accepted libmath-random-perl 0.72-1 (source amd64) into unstable

2015-09-24 Thread Charles Plessy
ain...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: libmath-random-perl - Perl collection of random number generators Changes: libmath-random-perl (0.72-1) unstable; urgency=medium . * New upstream release. . [ Salvatore Bonaccorso ] * Update Vcs

Accepted samtools 1.2-2 (source all amd64) into unstable

2015-09-17 Thread Charles Plessy
kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: samtools - processing sequence alignments in SAM and BAM formats samtools-test - test files for the samtools package. Changes: samtools (1.2-2) unstable; urgency=medium . [ Afif Elghraoui ] eb569

Accepted bedtools 2.25.0-1 (source all amd64) into unstable

2015-09-04 Thread Charles Plessy
kag...@lists.alioth.debian.org> Changed-By: Charles Plessy <ple...@debian.org> Description: bedtools - suite of utilities for comparing genomic features bedtools-test - test data for the bedtools package Changes: bedtools (2.25.0-1) unstable; urgency=medium . e37865 Merge tag 'v2.25.0'

Accepted mime-support 3.59 (source all) into unstable

2015-08-02 Thread Charles Plessy
-By: Charles Plessy ple...@debian.org Description: mime-support - MIME files 'mime.types' 'mailcap', and support programs Closes: 774303 776939 787459 793705 Changes: mime-support (3.59) unstable; urgency=medium . * Media types bdfd714 Add media types and extensions to support ClickOnce apps

Accepted bwa 0.7.12-2 (source amd64) into unstable

2015-07-03 Thread Charles Plessy
-By: Charles Plessy ple...@debian.org Description: bwa- Burrows-Wheeler Aligner Changes: bwa (0.7.12-2) unstable; urgency=medium . * Upload to Unstable. * Install bash completion script in /usr/share/bash-completion/completions. * Also distribute README-alt.md. * Watch GitHub

Accepted bioperl-run 1.6.9-3 (source all) into unstable

2015-07-02 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: bioperl-run - BioPerl wrappers: scripts libbio-perl-run-perl - BioPerl wrappers: modules Closes: 78 Changes: bioperl-run (1.6.9-3) unstable; urgency=medium . [ Charles Plessy ] * Build-depend

Accepted libbio-samtools-perl 1.41-1 (source amd64) into unstable

2015-06-17 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: libbio-samtools-perl - Perl interface to SamTools library for DNA sequencing Changes: libbio-samtools-perl (1.41-1) unstable; urgency=medium . 0b7140a Imported Upstream version 1.41 Checksums-Sha1

Accepted samtools 1.2-1 (source all amd64) into unstable

2015-06-15 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: samtools - processing sequence alignments in SAM and BAM formats samtools-test - test files for the samtools package. Changes: samtools (1.2-1) unstable; urgency=medium . a5f28a0 Merge tag '1.2' into debian/unstable

Re: Bug#787571: How about transferring /etc/mime.types from mime-support to base-files.

2015-06-04 Thread Charles Plessy
Le Wed, Jun 03, 2015 at 01:04:26AM +0200, Santiago Vila a écrit : To summarize: Because this would imply a change in the essentialness of the file, I don't think it would be a good idea. Thanks for the quick and precise answer. I agree. Have a nice day, Charles -- Charles Plessy Tsurumi

Bug#787571: How about transferring /etc/mime.types from mime-support to base-files.

2015-06-02 Thread Charles Plessy
://bugs.debian.org/786889. Alternatively, we could ship this file in base-files, since it is among these traditional Unix files that one always expects to be available. But it has frequent updates, to it may be extra work for you. What do you think about this ? Have a nice day, -- Charles Plessy

Accepted r-cran-rcurl 1.95-4.3-2 (source amd64) into unstable

2015-05-30 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: r-cran-rcurl - GNU R General network (HTTP/FTP/...) client interface Closes: 786473 Changes: r-cran-rcurl (1.95-4.3-2) unstable; urgency=medium . * Team upload. * Build-Depend on libcurl4-openssl-dev only (Closes

Accepted odt2txt 0.5-1 (source amd64) into unstable

2015-05-30 Thread Charles Plessy
-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sun, 31 May 2015 09:52:44 +0900 Source: odt2txt Binary: odt2txt Architecture: source amd64 Version: 0.5-1 Distribution: unstable Urgency: medium Maintainer: Nelson A. de Oliveira nao...@debian.org Changed-By: Charles Plessy ple

Bug#786889: ITP: media-types -- List of media types associated to file suffixes

2015-05-26 Thread Charles Plessy
Package: wnpp Severity: wishlist Owner: Charles Plessy ple...@debian.org Package name: media-types Version : 2.1.44 Upstream Author : Mostly Ville Skyttä ville.sky...@iki.fi, for Fedora URL : https://git.fedorahosted.org/cgit/mailcap.git/tree/mime.types License

Accepted htslib 1.2.1-1 (source all amd64) into unstable

2015-05-24 Thread Charles Plessy
-packag...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: htslib-test - Test data for HTSlib libhts-dev - Development files for the HTSlib libhts1- C library for high-throughput sequencing data formats tabix - generic indexer for TAB-delimited genome

Accepted bowtie 1.1.1-2 (source amd64 all) into unstable

2015-02-02 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: bowtie - Ultrafast memory-efficient short read aligner bowtie-examples - Examples for bowtie, the ultrafast memory-efficient short read al Closes: 776881 Changes: bowtie (1.1.1-2) unstable; urgency=high . * Team

Accepted mime-support 3.58 (source all) into unstable

2014-12-29 Thread Charles Plessy
-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sun, 28 Dec 2014 14:45:59 +0900 Source: mime-support Binary: mime-support Architecture: source all Version: 3.58 Distribution: unstable Urgency: high Maintainer: Mime-Support Maintainers mime-supp...@plessy.org Changed-By: Charles

Let's abandon debian-devel.

2014-11-10 Thread Charles Plessy
they have when feasting on debian-devel or debian-vote. Let's make our project stronger by reducing thr attack surface for troublemakers. Cheers, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel

Is it harmless to associate more file extensions to application/octet-stream ?

2014-11-09 Thread Charles Plessy
. With search engines I have not found evidence of a problem, but if you know one, please let me know. Have a nice Sunday, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas

Re: so long and thanks for all the fish

2014-11-07 Thread Charles Plessy
Hi Joey, among all the Debian developers you have been one of the most inspiring to me. I hope that you will keep your blog syndicated on planet.debian.org ! Cheers, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject

Re: dgit and git-dpm

2014-10-29 Thread Charles Plessy
to. Cheers, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org Archive: https://lists.debian.org/20141030032519.gh5...@falafel.plessy.net

Accepted seaview 1:4.5.3.1-2 (source amd64) into unstable

2014-10-18 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: seaview- Multiplatform interface for sequence alignment and phylogeny Closes: 765824 Changes: seaview (1:4.5.3.1-2) unstable; urgency=medium . * Remove unneeded build-dependance on libjpeg8-dev (Closes: #765824). Checksums-Sha1

Re: piece of mind (Re: Moderated posts?)

2014-10-13 Thread Charles Plessy
Le Mon, Oct 13, 2014 at 02:21:45PM +0200, Thorsten Glaser a écrit : … but even then, am drowned by the masses. No, you are drowning the masses under your emails, that is different. -- Charles -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of unsubscribe.

Accepted euca2ools 3.1.0-1 (source all) into unstable

2014-10-08 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: euca2ools - tools for interacting with AWS API-compatible services Closes: 734616 758910 Changes: euca2ools (3.1.0-1) unstable; urgency=medium . 5d9d911 Merge tag 'v3.1.0' into debian/unstable Closes: #734616

Accepted euca2ools 3.2.0~pre1-1 (source all) into experimental

2014-10-08 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: euca2ools - tools for interacting with AWS API-compatible services Changes: euca2ools (3.2.0~pre1-1) experimental; urgency=medium . 493e785 Merged upstream tag v3.2.0-pre1. 3f4b6a5 Depends on python

Re: Fwd: bash exorcism experiment ('bug' 762923 763012)

2014-10-07 Thread Charles Plessy
time to get over. On this mailing list, you went as far as calling for murder, and regularly insulting others. I hope that next time you will get at the very least banned from posting on this list for a few weeks. Cheers, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel

Accepted odt2txt 0.4+git20140608-1 (source amd64) into unstable

2014-10-04 Thread Charles Plessy
-BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sat, 04 Oct 2014 17:21:42 +0900 Source: odt2txt Binary: odt2txt Architecture: source amd64 Version: 0.4+git20140608-1 Distribution: unstable Urgency: medium Maintainer: Nelson A. de Oliveira nao...@debian.org Changed-By: Charles

Accepted mime-support 3.57 (source all) into unstable

2014-10-04 Thread Charles Plessy
-By: Charles Plessy ple...@debian.org Description: mime-support - MIME files 'mime.types' 'mailcap', and support programs Closes: 749771 756754 759746 Changes: mime-support (3.57) unstable; urgency=medium . * Media types added: ef09adf application/x-xz Closes: #756754

Accepted mafft 7.187-1 (source amd64) into unstable

2014-10-04 Thread Charles Plessy
Changed-By: Charles Plessy ple...@debian.org Description: mafft - Multiple alignment program for amino acid or nucleotide sequences Changes: mafft (7.187-1) unstable; urgency=medium . * New upstream release. * Conforms to Policy 3.9.6. Checksums-Sha1

Re: versions / suffixes in experimental

2014-09-25 Thread Charles Plessy
Le Thu, Sep 25, 2014 at 11:15:46AM +0200, Daniel Pocock a écrit : On 25/09/14 10:00, Neil Williams wrote: On Thu, 25 Sep 2014 09:42:42 +0200 Jonas Smedegaard d...@jones.dk wrote: Quoting Daniel Pocock (2014-09-25 09:16:46) I have a package, version 2.2.5-5 in unstable and testing I

Accepted htslib 1.1-1 (source amd64 all) into unstable

2014-09-24 Thread Charles Plessy
-packag...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: htslib-test - Test data for HTSlib libhts-dev - Development files for the HTSlib libhts1- C library for high-throughput sequencing data formats tabix - generic indexer for TAB-delimited genome

Accepted samtools 1.1-1 (source amd64 all) into unstable

2014-09-24 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: samtools - processing sequence alignments in SAM and BAM formats samtools-test - test files for the samtools package. Changes: samtools (1.1-1) unstable; urgency=medium . c448d48 Merge tag '1.1' into debian/unstable

Re: Trimming priority:standard

2014-09-23 Thread Charles Plessy
installed systems where I am sure that I never used hdparm). Anyway, the point I want to make is that we should trust Ralf when he reports that full disk load slows his machine despite cron jobs using ionice, although this is probably a corner case. Have a nice day, -- Charles Plessy Tsurumi

Accepted bedtools 2.21.0-1 (source amd64 all) into unstable

2014-09-23 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: bedtools - suite of utilities for comparing genomic features bedtools-test - test data for the bedtools package Changes: bedtools (2.21.0-1) unstable; urgency=medium . 856a5fd Merge tag 'v2.21.0' into debian

Accepted paraclu 9-1 (source amd64) into unstable, unstable

2014-09-23 Thread Charles Plessy
-By: Charles Plessy ple...@debian.org Description: paraclu- Parametric clustering of genomic and transcriptomic features Closes: 762412 Changes: paraclu (9-1) unstable; urgency=low . * First upload to the Debian archive, closes: #762412. Checksums-Sha1

Accepted wise 2.4.1-17 (source amd64 all) into unstable

2014-09-23 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: wise - comparison of biopolymers, like DNA and protein sequences wise-data - data files for the wise package wise-doc - documentation for the wise package Changes: wise (2.4.1-17) unstable; urgency=medium

Accepted samtools 1.0-1 (source amd64 all) into unstable

2014-09-22 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: samtools - processing sequence alignments in SAM and BAM formats samtools-test - test files for the samtools package. Closes: 544976 Changes: samtools (1.0-1) unstable; urgency=low . [ Charles Plessy ] 54ca0c1 Merge

Bug#762412: ITP: paraclu -- Parametric clustering of genomic and transcriptomic features

2014-09-21 Thread Charles Plessy
Package: wnpp Severity: wishlist Owner: Charles Plessy ple...@debian.org * Package name: paraclu Version : 9 Upstream Author : Martin C. Frith * URL : http://www.cbrc.jp/paraclu/ * License : GPL-3+ Programming Lang: C++ Description : Parametric

Accepted seaview 1:4.5.2-1 (source amd64) into unstable

2014-09-21 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: seaview- Multiplatform interface for sequence alignment and phylogeny Changes: seaview (1:4.5.2-1) unstable; urgency=medium . * New upstream version. * New homepage. Checksums-Sha1: b9e006bc1677bcb30ea9af5efc0efe28541eb001

Accepted samtools-legacy 0.1.19-2 (source amd64) into unstable, unstable

2014-09-18 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: libbam-dev - manipulates nucleotide sequence alignments in BAM or SAM format Changes: samtools-legacy (0.1.19-2) unstable; urgency=medium . 1bb181e Build libbam-dev from version 0.1.19 in a “legacy” source package. Checksums

Accepted htslib 1.0-2 (source amd64 all) into unstable

2014-09-16 Thread Charles Plessy
-packag...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: htslib-test - Test data for HTSlib libhts-dev - Development files for the HTSlib libhts1- C library for high-throughput sequencing data formats tabix - generic indexer for TAB-delimited genome

Re: 2 months and no upload for pkg

2014-09-06 Thread Charles Plessy
licenses to the queue, and transferring the checks for DFSG compliance (missing source files, non-free licenses, ...) and quality in general to another stage of package production. Have a nice week-end, -- Charles Plessy -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org

Re: Possible abuse of dpkg-deb -z9 for xz compressed binary packages

2014-09-05 Thread Charles Plessy
Le Fri, Sep 05, 2014 at 11:13:40AM +0200, Thorsten Glaser a écrit : So please, do not outright dismiss scenarios you personally cannot imagine. Please consider that your comments on the limited imagination of others can be felt as deliberately offensive. Cheers, -- Charles Plessy

Re: bits from the DPL -- mid-April to mid-August 2014

2014-08-26 Thread Charles Plessy
point 3 here: https://www.eff.org/deeplinks/2011/06/eff-and-bitcoin Hi Santiago, The EFF changed its mind two years later. https://www.eff.org/deeplinks/2013/05/eff-will-accept-bitcoins-support-digital-liberty Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE

Re: Standardizing the layout of git packaging repositories

2014-08-24 Thread Charles Plessy
, because it will not affect you. Have a nice day, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Accepted samtools 1.0-1~experimental (source amd64 all) into experimental, experimental

2014-08-23 Thread Charles Plessy
-packag...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: samtools - processing sequence alignments in SAM and BAM formats samtools-test - test files for the samtools package. Closes: 544976 Changes: samtools (1.0-1~experimental) experimental; urgency=low

Re: Reverting to GNOME for jessie's default desktop

2014-08-21 Thread Charles Plessy
a nice week-end, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org Archive: https://lists.debian.org/20140822053755.gb28...@falafel.plessy.net

Re: Bug#758124: Documenting the Testsuite field in the Policy.

2014-08-19 Thread Charles Plessy
Le Thu, Aug 14, 2014 at 09:36:50PM +0900, Charles Plessy a écrit : Here is a patch to update the Policy accordingly. Do you have comments ? On Tue, Aug 19, 2014 at 07:44:19AM +0900, Charles Plessy wrote: Anybody wanting to see the Testsuite field documented in the Policy, please

Accepted htslib 1.0-1 (source amd64 all) into experimental, experimental

2014-08-19 Thread Charles Plessy
-packag...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: htslib-test - Test data for HTSlib libhts-dev - Development files for the HTSlib libhts1- C library for high-throughput sequencing data formats tabix - generic indexer for TAB-delimited genome

Re: Replacement of SAMtools 0.19 by SAMtools 1.0.

2014-08-18 Thread Charles Plessy
together and that the fix in HTSJDK will eventually propagate to Picard ? Have a nice day, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of unsubscribe

Re: Standardizing the layout of git packaging repositories

2014-08-18 Thread Charles Plessy
by packages.debian.org (#703237). Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org Archive: https://lists.debian.org/20140818212213.ga30

Re: Bug#758124: Documenting the Testsuite field in the Policy.

2014-08-18 Thread Charles Plessy
Le Thu, Aug 14, 2014 at 09:36:50PM +0900, Charles Plessy a écrit : Package: debian-policy Version: 3.9.5 Severity: wishlist Hi Guillem and everybody, thanks for adding direct support for the Testsuite field in Dpkg. Here is a patch to update the Policy accordingly. Do you have

Re: Standardizing the layout of git packaging repositories

2014-08-17 Thread Charles Plessy
Le Sun, Aug 17, 2014 at 09:00:57AM +0200, Raphael Hertzog a écrit : debian/unstable also doesn't follow debian/codename because unstable's codename is sid. And I really mean that codename is a better choice than suite (e.g. unstable, testing, stable). Hi all, for suites that are never

Accepted last-align 475-1 (source amd64) into unstable

2014-08-16 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: last-align - genome-scale comparison of biological sequences Changes: last-align (475-1) unstable; urgency=medium . * New upstream release. * debian/rules: - removed compression command, as it is now the default

Re: Standardizing the layout of git packaging repositories

2014-08-15 Thread Charles Plessy
not find better than importing the release tarball with ‘git-import-orig’ instead of following Upstream's master branch. Have a nice week-end, Charles -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email

Bug#758124: Documenting the Testsuite field in the Policy.

2014-08-14 Thread Charles Plessy
Package: debian-policy Version: 3.9.5 Severity: wishlist Hi Guillem and everybody, thanks for adding direct support for the Testsuite field in Dpkg. Here is a patch to update the Policy accordingly. Do you have comments ? Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan From

Re: 2 months and no upload for pkg

2014-08-13 Thread Charles Plessy
a process for peer review at the URL below. https://wiki.debian.org/CopyrightReview Have a nice day, [0] https://lists.debian.org/alpine.deb.2.02.1408060907090.9...@jupiter.server.alteholz.net -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa

Accepted treeviewx 0.5.1+20100823-3 (source amd64) into unstable

2014-08-10 Thread Charles Plessy
...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: treeviewx - Displays and prints phylogenetic trees Closes: 751255 Changes: treeviewx (0.5.1+20100823-3) unstable; urgency=low . * Normalised debian/control and updated VCS URLs with ‘config-model-edit’. * Conforms

Re: Reintroducing FFmpeg to Debian

2014-08-09 Thread Charles Plessy
/collab-maint/ffmpeg.git Hi Andreas, I searched for license information missing from your debian/copyright and could find only one case, libavutil/x86/x86inc.asm, which is under the ISC license. The debian/copyright file of your package looks comprehensive to me. Have a nice week-end, -- Charles

Re: Reverting to GNOME for jessie's default desktop

2014-08-08 Thread Charles Plessy
by herself, and spontaneoulsy told me how impressed she was by the user interface of Debian. The common point between these colleagues, is that they knew nothing about the Gnome 2/3 controversy, and were more used to the Mac or Windows interfaces. /my life as well -- Charles Plessy Tsurumi

Accepted infernal 1.1.1-1 (source amd64 all) into unstable

2014-08-08 Thread Charles Plessy
-packag...@lists.alioth.debian.org Changed-By: Charles Plessy ple...@debian.org Description: infernal - inference of RNA secondary structural alignments infernal-dbg - debug information for infernal infernal-doc - inference of RNA secondary structural alignments – documentation Changes: infernal

Re: Reintroducing FFmpeg to Debian

2014-08-06 Thread Charles Plessy
be dealt with a DAK command file ?) Have a nice day, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas

Re: First steps towards source-only uploads

2014-08-05 Thread Charles Plessy
field ? Do you think that modifications are needed ? Would you second it ? https://bugs.debian.org/756835 Have a nice day, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ

Re: Licensing issue in images files on several packages

2014-08-04 Thread Charles Plessy
not affect currently accepted licenses, then the rejection of CC-BY-SA 2.0 is not justified. Tautologically, Charles -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas

Re: Bug#756521: ITP: kadeploy -- Scalable, efficient and reliable cluster provisioning solution

2014-08-02 Thread Charles Plessy
would be nice… Have a nice week-end, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org Archive: https://lists.debian.org/20140802070326.ga9

Bug#756835: First steps towards source-only uploads

2014-08-02 Thread Charles Plessy
, as this value is assumed for paragraphs lacking this field. - Everybody's suggestions are welcome ! Have a nice week-end, and big thank you to Ansgar and the other FTP Masters for the source-only uploads ! -- Charles Plessy Debian

Re: Bug#729203: [FFmpeg-devel] Reintroducing FFmpeg to Debian

2014-07-31 Thread Charles Plessy
if it is against their own interest since they may see their packages removed at the end. Otherwise we are in that kind of frequent Debianesque situation where the winning strategy is to stay silent as long as possible. Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email

Re: systemd now appears to be only possible init system in testing

2014-07-28 Thread Charles Plessy
no result. Can you please stop to pollute this list each time there is ‘systemd’ in the subject ? -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org Archive: https

Re: systemd now appears to be only possible init system in testing

2014-07-22 Thread Charles Plessy
pepole are enough to destroy the productivity of a mailing list). Have a nice day, -- Charles Plessy Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org Archive: https

  1   2   3   4   5   6   7   8   9   10   >