Accepted tantan 13-2 (source amd64) into unstable

2016-02-15 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: tantan - low complexity and tandem repeat masker for biosequences Changes: tantan (13-2) unstable; urgency=medium . * Migrate package to Git * Fix buildflags and remove override * Use secure Vcs-Git Ch

Accepted datatables.js 1.10.11+dfsg-1 (source all) into unstable

2016-02-12 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libjs-jquery-datatables - jQuery plug-in that makes nice tables from different data sources Changes: datatables.js (1.10.11+dfsg-1) unstable; urgency=medium . * New upstream release. Ch

Accepted htslib 1.3-2 (source all amd64) into unstable

2016-02-08 Thread Sascha Steinbiss
med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: htslib-test - Test data for HTSlib libhts-dev - Development files for the HTSlib libhts1- C library for high-throughput sequencing data formats tabix - generic indexer for T

Accepted aegean 0.15.1+dfsg-3 (source amd64) into unstable

2016-02-07 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: aegean - integrated genome analysis toolkit aegean-dbg - integrated genome analysis toolkit, with debug symbols Changes: aegean (0.15.1+dfsg-3) unstable; urgency=low . [ Jon Ison, Steffen Moe

Accepted aragorn 1.2.36-6 (source amd64) into unstable

2016-02-07 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: aragorn- tRNA and tmRNA detection in nucleotide sequences Changes: aragorn (1.2.36-6) unstable; urgency=low . * update Vcs-* to reflect new location on Git Checksums-Sha1: 65db2d484af7f53c914aac2985bd899c3

Accepted genometools 1.5.8-2 (source all amd64) into unstable

2016-02-07 Thread Sascha Steinbiss
Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for

Accepted roary 3.5.8+dfsg-1 (source all) into unstable

2016-02-07 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: roary - high speed stand alone pan genome pipeline Changes: roary (3.5.8+dfsg-1) unstable; urgency=low . * New upstream release. * Use secure Vcs-Git Checksums-Sha1: 86ba1fccceb443436bb9e3326d5eb5be0

Accepted samtools 1.3-1 (source amd64 all) into unstable

2016-02-05 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: samtools - processing sequence alignments in SAM and BAM formats samtools-test - test files for the samtools package Changes: samtools (1.3-1) unstable; urgency=medium . [ Charles Plessy ] 9

Accepted roary 3.5.7+dfsg-1 (source all) into unstable, unstable

2016-02-05 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: roary - high speed stand alone pan genome pipeline Closes: 808495 Changes: roary (3.5.7+dfsg-1) unstable; urgency=low . * Initial release (Closes: #808495) Checksums-Sha1: a077167f1756674e6c5b2e49ac8f89f9a

Accepted fastaq 3.11.1-2 (source all) into unstable

2016-02-05 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: fastaq - FASTA and FASTQ file manipulation tools Changes: fastaq (3.11.1-2) unstable; urgency=medium . * Try to fix unsatisfied Depends. * Improve long description. * Use secure Vcs-Git Ch

Accepted snpomatic 0.0.20151015-1 (source amd64) into unstable, unstable

2016-01-30 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: snpomatic - fast, stringent short-read mapping software Closes: 807779 Changes: snpomatic (0.0.20151015-1) unstable; urgency=medium . * Initial release. (Closes: #807779) Ch

Accepted snp-sites 2.1.3-1 (source amd64) into unstable

2016-01-30 Thread Sascha Steinbiss
ian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libsnp-sites1 - Shared libraries of the package snp-sites libsnp-sites1-dev - Static libraries and header files for the package snp-sites snp-sites - Binary code for the packa

Accepted snp-sites 2.1.3-2 (source amd64) into unstable

2016-01-30 Thread Sascha Steinbiss
ian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libsnp-sites1 - Shared libraries of the package snp-sites libsnp-sites1-dev - Static libraries and header files for the package snp-sites snp-sites - Binary code for the packa

Accepted htslib 1.3-1 (source all amd64) into unstable

2016-01-30 Thread Sascha Steinbiss
med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: htslib-test - Test data for HTSlib libhts-dev - Development files for the HTSlib libhts1- C library for high-throughput sequencing data formats tabix - generic indexer for T

Accepted miniasm 0.2+dfsg-1 (source amd64) into unstable

2016-01-26 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: miniasm- ultrafast de novo assembler for long noisy DNA sequencing reads Changes: miniasm (0.2+dfsg-1) unstable; urgency=medium . * Remove upstream manuscript draft from source. * Add missing copyr

Accepted datatables.js 1.10.10+dfsg-2 (source all) into unstable

2016-01-26 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libjs-jquery-datatables - jQuery plug-in that makes nice tables from different data sources Changes: datatables.js (1.10.10+dfsg-2) unstable; urgency=medium . * Adjust VCS-Git

Accepted miniasm 0.2-1 (source amd64) into unstable, unstable

2016-01-25 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: miniasm- ultrafast de novo assembler for long noisy DNA sequencing reads Closes: 812426 Changes: miniasm (0.2-1) unstable; urgency=low . * Initial packaging (Closes: #812426) Ch

Accepted pbsim 1.0.3-1 (source amd64) into unstable, unstable

2016-01-25 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: pbsim - simulator for PacBio sequencing reads Closes: 812526 Changes: pbsim (1.0.3-1) unstable; urgency=low . * Initial release (Closes: #812526) Checksums-Sha1: 623d22bcbfef97119f95367d709b151c9981d63d 1924 pbsim

Accepted minimap 0.2-1 (source amd64) into unstable, unstable

2016-01-13 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libminimap-dev - development headers for libminimap libminimap0 - library for approximate mapping of long biosequences minimap- tool for approximate mapping of long biosequences such as DN

Accepted minimap 0.2-2 (source amd64) into unstable

2016-01-13 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libminimap-dev - development headers for libminimap libminimap0 - library for approximate mapping of long biosequences minimap- tool for approximate mapping of long biosequences suc

Accepted aegean 0.15.1+dfsg-1 (source amd64) into unstable

2016-01-09 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: aegean - integrated genome analysis toolkit aegean-dbg - integrated genome analysis toolkit, with debug symbols Changes: aegean (0.15.1+dfsg-1) unstable; urgency=medium . * New upstream releas

Accepted aegean 0.15.1+dfsg-2 (source amd64) into unstable

2016-01-09 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: aegean - integrated genome analysis toolkit aegean-dbg - integrated genome analysis toolkit, with debug symbols Changes: aegean (0.15.1+dfsg-2) unstable; urgency=medium . * Remove broken archs,

Accepted genometools 1.5.8-1 (source all amd64) into unstable

2016-01-07 Thread Sascha Steinbiss
Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for

Accepted fastaq 3.11.1-1 (source all) into unstable

2016-01-05 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: fastaq - FASTA and FASTQ file manipulation tools Changes: fastaq (3.11.1-1) unstable; urgency=medium . * New upstream version. Checksums-Sha1: 9c467116bfdd4dc84382f3f9753f57d37d109f21 2062 fastaq_

Accepted kmc 2.3+dfsg-1 (source amd64) into unstable, unstable

2016-01-04 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: kmc- count kmers in genomic sequences libkmc-dev - library to access KMC k-mer count files Changes: kmc (2.3+dfsg-1) unstable; urgency=medium . [ Kevin Murray ] * Add libkmc-dev package .

Accepted libtabixpp 1.0.0-2 (source amd64) into unstable

2015-12-21 Thread Sascha Steinbiss
ian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libtabixpp-dev - C++ wrapper to tabix indexer (development files) libtabixpp0 - C++ wrapper to tabix indexer libtabixpp0-dbg - C++ wrapper to tabix indexer (debug symb

Accepted libfile-grep-perl 0.02-1 (source all) into unstable, unstable

2015-12-20 Thread Sascha Steinbiss
ain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libfile-grep-perl - module for pattern matching in a series of files Closes: 808351 Changes: libfile-grep-perl (0.02-1) unstable; urgency=low . * Initial Release (Closes: #808351). Ch

Accepted libtest-files-perl 0.14-1 (source all) into unstable, unstable

2015-12-20 Thread Sascha Steinbiss
ain...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libtest-files-perl - module to ease testing with files and directories Closes: 808350 Changes: libtest-files-perl (0.14-1) unstable; urgency=low . * Initial Release (Closes: #808350). Ch

Accepted libtabixpp 1.0.0-1 (source amd64) into unstable, unstable

2015-12-19 Thread Sascha Steinbiss
ian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libtabixpp-dev - C++ wrapper to tabix indexer (development files) libtabixpp0 - C++ wrapper to tabix indexer libtabixpp0-dbg - C++ wrapper to tabix indexer (debug symbols) Closes: 80

Accepted snp-sites 2.1.1-1 (source amd64) into unstable

2015-12-15 Thread Sascha Steinbiss
ian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libsnp-sites1 - Shared libraries of the package snp-sites libsnp-sites1-dev - Static libraries and header files for the package snp-sites snp-sites - Binary code for the packa

Accepted genometools 1.5.7-7 (source all amd64) into unstable

2015-12-13 Thread Sascha Steinbiss
Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for

Accepted ltrsift 1.0.2-5 (source amd64 all) into unstable

2015-12-12 Thread Sascha Steinbiss
med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: ltrsift- postprocessing and classification of LTR retrotransposons ltrsift-dbg - postprocessing and classification of LTR retrotransposons, with d ltrsift-examples - example data

Accepted genometools 1.5.7-6 (source all amd64) into unstable

2015-12-09 Thread Sascha Steinbiss
Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for

Accepted codonw 1.4.4-2 (source amd64) into unstable

2015-12-08 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: codonw - Correspondence Analysis of Codon Usage Changes: codonw (1.4.4-2) unstable; urgency=medium . * Remove nondeterminism - menu.c: Do not print compilation date and time Ch

Accepted genometools 1.5.7-5 (source all amd64) into unstable

2015-12-08 Thread Sascha Steinbiss
Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for

Accepted codonw 1.4.4-1 (source amd64) into unstable, unstable

2015-12-05 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: codonw - Correspondence Analysis of Codon Usage Closes: 805693 Changes: codonw (1.4.4-1) unstable; urgency=low . * Initial release (Closes: #805693) Checksums-Sha1: 9aba9358338040062f0128b206c5223bff1c3836 1896 co

Accepted snp-sites 2.1.0-2 (source amd64) into unstable

2015-12-04 Thread Sascha Steinbiss
ian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libsnp-sites1 - Shared libraries of the package snp-sites libsnp-sites1-dev - Static libraries and header files for the package snp-sites snp-sites - Binary code for the packa

Accepted genometools 1.5.7-4 (source all amd64) into unstable

2015-12-04 Thread Sascha Steinbiss
Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for

Accepted snp-sites 2.1.0-1 (source amd64) into unstable

2015-12-03 Thread Sascha Steinbiss
ian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libsnp-sites1 - Shared libraries of the package snp-sites libsnp-sites1-dev - Static libraries and header files for the package snp-sites snp-sites - Binary code for the packa

Accepted aragorn 1.2.36-5 (source amd64) into unstable

2015-12-01 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: aragorn- tRNA and tmRNA detection in nucleotide sequences Changes: aragorn (1.2.36-5) unstable; urgency=medium . * Fix freeze with -O2/3. * Add simple autopkgtest. * Bump standards version. Ch

Accepted fastaq 3.11.0-1 (source all) into unstable

2015-11-30 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: fastaq - FASTA and FASTQ file manipulation tools Changes: fastaq (3.11.0-1) unstable; urgency=medium . * New upstream version. * Add basic autopkgtests. Checksums-Sha1: 8d08979e8217b570a5acfc771588e0ffa

Accepted aegean 0.14.1+dfsg2-2 (source amd64) into unstable

2015-11-29 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: aegean - integrated genome analysis toolkit aegean-dbg - integrated genome analysis toolkit, with debug symbols Changes: aegean (0.14.1+dfsg2-2) unstable; urgency=low . * d/rules: build w/o para

Accepted datatables.js 1.10.10+dfsg-1 (source all) into unstable

2015-11-28 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libjs-jquery-datatables - jQuery plug-in that makes nice tables from different data sources Changes: datatables.js (1.10.10+dfsg-1) unstable; urgency=medium . * New upstream release. Ch

Accepted snp-sites 2.0.2-2 (source amd64) into unstable

2015-11-28 Thread Sascha Steinbiss
ian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libsnp-sites1 - Shared libraries of the package snp-sites libsnp-sites1-dev - Static libraries and header files for the package snp-sites snp-sites - Binary code for the packa

Accepted datatables.js 1.10.9+dfsg-1 (source all) into unstable, unstable

2015-11-27 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: libjs-jquery-datatables - jQuery plug-in that makes nice tables from different data sources Closes: 719601 Changes: datatables.js (1.10.9+dfsg-1) unstable; urgency=medium . * Initial rel

Accepted aegean 0.14.1+dfsg2-1 (source amd64) into unstable

2015-11-27 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: aegean - integrated genome analysis toolkit aegean-dbg - integrated genome analysis toolkit, with debug symbols Closes: 798900 Changes: aegean (0.14.1+dfsg2-1) unstable; urgency=medium .

Accepted fastaq 3.10.1-1 (source all) into unstable

2015-11-16 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: fastaq - FASTA and FASTQ file manipulation tools Changes: fastaq (3.10.1-1) unstable; urgency=medium . * New upstream version. Checksums-Sha1: 1ee3293a5df009b795c51530aed4941f5da8 2039 fastaq_

Accepted genometools 1.5.7-3 (source all amd64) into unstable

2015-11-09 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for

Accepted ltrsift 1.0.2-4 (source amd64 all) into unstable

2015-10-17 Thread Sascha Steinbiss
med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: ltrsift- postprocessing and classification of LTR retrotransposons ltrsift-dbg - postprocessing and classification of LTR retrotransposons, with d ltrsift-examples - example data

Accepted fastaq 3.10.0-1 (source all) into unstable

2015-10-16 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: fastaq - FASTA and FASTQ file manipulation tools Changes: fastaq (3.10.0-1) unstable; urgency=medium . * New upstream version. Checksums-Sha1: 26f95bfab5f8fb622da79bed56e16fa387c6626c 2039 fastaq_

Accepted fastaq 3.9.0-1 (source all) into unstable

2015-10-14 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: fastaq - FASTA and FASTQ file manipulation tools Changes: fastaq (3.9.0-1) unstable; urgency=medium . * New upstream version. Checksums-Sha1: 488f69a3e79076b381270b30dde532a94794df27 2047 fastaq

Accepted aegean 0.14.1+dfsg-1 (source amd64) into unstable

2015-10-10 Thread Sascha Steinbiss
kag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: aegean - integrated genome analysis toolkit aegean-dbg - integrated genome analysis toolkit, with debug symbols Changes: aegean (0.14.1+dfsg-1) unstable; urgency=low . * New upstream release. Ch

Accepted genometools 1.5.7-2 (source all amd64) into unstable

2015-10-10 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for

Accepted fastaq 3.8.0-1 (source all) into unstable

2015-09-26 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: fastaq - FASTA and FASTQ file manipulation tools Changes: fastaq (3.8.0-1) unstable; urgency=medium . * New upstream version. Checksums-Sha1: b54286a4fdefce61137373443e53fe55759671bd 2047 fastaq

Accepted genometools 1.5.7-1 (source all amd64) into unstable

2015-09-13 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for

Accepted fastaq 3.7.0-1 (source all) into unstable

2015-09-09 Thread Sascha Steinbiss
org> Changed-By: Sascha Steinbiss <sas...@steinbiss.name> Description: fastaq - FASTA and FASTQ file manipulation tools Changes: fastaq (3.7.0-1) unstable; urgency=low . * New upstream version Checksums-Sha1: 628493628d44395253bcfd20e85648bccc9bb9cb 2047 fastaq

Accepted mussort 0.3-6 (source all) into unstable

2015-09-08 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 31 Aug 2015 20:39:41 + Source: mussort Binary: mussort Architecture: source all Version: 0.3-6 Distribution: unstable Urgency: low Maintainer: Sascha Steinbiss <sa...@tetrinetsucht.de> Changed-By: Sascha Steinbi

Accepted kmc 2.2+dfsg-1 (source amd64) into unstable

2015-08-26 Thread Sascha Steinbiss
-By: Sascha Steinbiss sas...@steinbiss.name Description: kmc- count kmers in genomic sequences Changes: kmc (2.2+dfsg-1) unstable; urgency=low . * New upstream release * d/watch: Adjusted to use actual upstream's github repo * Rework patches to fit new upstream build system

Accepted tantan 13-1 (source amd64) into unstable, unstable

2015-08-08 Thread Sascha Steinbiss
-By: Sascha Steinbiss sas...@steinbiss.name Description: tantan - low complexity and tandem repeat masker for biosequences Closes: 793907 Changes: tantan (13-1) unstable; urgency=low . * Initial release (Closes: #793907) * Add missing copyright holder in d/copyright * Fix machine

Accepted barrnap 0.7+dfsg-1 (source all) into unstable

2015-07-29 Thread Sascha Steinbiss
Changed-By: Sascha Steinbiss sas...@steinbiss.name Description: barrnap- rapid ribosomal RNA prediction Changes: barrnap (0.7+dfsg-1) unstable; urgency=low . * New upstream release. * Remove Suggests: to non-existent barrnap=data-nonfree package Checksums-Sha1

Accepted aegean 0.13.0+dfsg-1 (source amd64) into unstable

2015-07-28 Thread Sascha Steinbiss
...@lists.alioth.debian.org Changed-By: Sascha Steinbiss sas...@steinbiss.name Description: aegean - integrated genome analysis toolkit aegean-dbg - integrated genome analysis toolkit, with debug symbols Changes: aegean (0.13.0+dfsg-1) unstable; urgency=low . * New upstream release. Checksums-Sha1

Accepted barrnap 0.5+dfsg-1 (source all) into unstable, unstable

2015-07-24 Thread Sascha Steinbiss
Changed-By: Sascha Steinbiss sas...@steinbiss.name Description: barrnap- rapid ribosomal RNA prediction Closes: 769641 Changes: barrnap (0.5+dfsg-1) unstable; urgency=low . * Initial release (Closes: #769641) Checksums-Sha1: 76fee414d320bf84bcfc579a4e9549acd6c9e56a 2012 barrnap_0.5+dfsg-1

Accepted aegean 0.10.2+dfsg-1 (source amd64) into unstable, unstable

2015-07-24 Thread Sascha Steinbiss
...@lists.alioth.debian.org Changed-By: Sascha Steinbiss sas...@steinbiss.name Description: aegean - integrated genome analysis toolkit aegean-dbg - integrated genome analysis toolkit, with debug symbols Closes: 769162 Changes: aegean (0.10.2+dfsg-1) unstable; urgency=low . * Initial release (Closes

Accepted genometools 1.5.6-1 (source all amd64) into unstable

2015-06-22 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss sas...@steinbiss.name Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools genometools-dbg

Accepted genometools 1.5.5-2 (source all amd64) into unstable

2015-06-10 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss sas...@steinbiss.name Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools genometools-dbg

Accepted genometools 1.5.5-1 (source all amd64) into unstable

2015-06-06 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss sas...@steinbiss.name Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools genometools-dbg

Accepted genometools 1.5.4-1 (source amd64 all) into experimental

2014-12-12 Thread Sascha Steinbiss
Distribution: experimental Urgency: low Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss sas...@steinbiss.name Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools

Accepted ltrsift 1.0.2-2 (source amd64 all) into unstable

2014-11-18 Thread Sascha Steinbiss
-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss sas...@steinbiss.name Description: ltrsift- postprocessing and classification of LTR retrotransposons ltrsift-dbg - postprocessing and classification of LTR retrotransposons, with d ltrsift-examples - example data for LTRsift Changes

Accepted ltrsift 1.0.2-3 (source amd64 all) into unstable

2014-11-18 Thread Sascha Steinbiss
-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss sas...@steinbiss.name Description: ltrsift- postprocessing and classification of LTR retrotransposons ltrsift-dbg - postprocessing and classification of LTR retrotransposons, with d ltrsift-examples - example data for LTRsift Changes

Accepted mussort 0.3-5 (source all) into unstable

2014-11-18 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 18 Nov 2014 19:47:07 + Source: mussort Binary: mussort Architecture: source all Version: 0.3-5 Distribution: unstable Urgency: low Maintainer: Sascha Steinbiss sa...@tetrinetsucht.de Changed-By: Sascha Steinbiss sa

Accepted genometools 1.5.3-2 (source amd64 all) into unstable

2014-09-05 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss sas...@steinbiss.name Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools genometools

Accepted aragorn 1.2.36-3 (source amd64)

2014-07-16 Thread Sascha Steinbiss
Changed-By: Sascha Steinbiss sas...@steinbiss.name Description: aragorn- tRNA and tmRNA detection in nucleotide sequences Changes: aragorn (1.2.36-3) unstable; urgency=low . * hardening-includes = use dpkg-buildflags instead * debian/control: Update vcs field * debian/control: Update

Accepted genometools 1.5.3-1 (source amd64 all)

2014-07-16 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss sas...@steinbiss.name Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools genometools

Accepted mussort 0.3-4 (source all)

2014-07-16 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 16 Jul 2014 22:09:32 +0100 Source: mussort Binary: mussort Architecture: source all Version: 0.3-4 Distribution: unstable Urgency: low Maintainer: Sascha Steinbiss sa...@tetrinetsucht.de Changed-By: Sascha Steinbiss sa

Accepted aragorn 1.2.36-4 (source amd64)

2014-07-16 Thread Sascha Steinbiss
Changed-By: Sascha Steinbiss sas...@steinbiss.name Description: aragorn- tRNA and tmRNA detection in nucleotide sequences Changes: aragorn (1.2.36-4) unstable; urgency=low . * Fix hardening flags * Add patch description Checksums-Sha1: 859b5c8b3e8dfa0ea982b7ff960adb9d2ff6567a 1950

Accepted genometools 1.5.2-4 (source amd64 all)

2014-05-24 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools

Accepted genometools 1.5.2-3 (source amd64 all)

2014-05-20 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools

Accepted genometools 1.5.2-2 (source amd64 all)

2014-05-16 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss sa...@tetrinetsucht.de Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools genometools

Accepted genometools 1.5.2-1 (source amd64 all)

2014-05-15 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools

Accepted mussort 0.3-3 (source all)

2014-05-14 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Wed, 14 May 2014 14:07:41 +0100 Source: mussort Binary: mussort Architecture: source all Version: 0.3-3 Distribution: unstable Urgency: low Maintainer: Sascha Steinbiss sa...@tetrinetsucht.de Changed-By: Sascha Steinbiss sa

Accepted genometools 1.5.1-3 (source amd64 all)

2014-05-13 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools

Accepted mussort 0.3-2 (source all)

2013-11-05 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Tue, 05 Nov 2013 10:57:03 +0100 Source: mussort Binary: mussort Architecture: source all Version: 0.3-2 Distribution: unstable Urgency: low Maintainer: Sascha Steinbiss sa...@tetrinetsucht.de Changed-By: Sascha Steinbiss sa

Accepted aragorn 1.2.36-2 (source amd64)

2013-11-05 Thread Sascha Steinbiss
Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: aragorn- tRNA and tmRNA detection in nucleotide sequences Changes: aragorn (1.2.36-2) unstable; urgency=low . * Adjust weekday in changelog (fixes lintian warning) * Fix spelling error in manpage Checksums-Sha1

Accepted mussort 0.3-1 (source all)

2013-09-02 Thread Sascha Steinbiss
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Format: 1.8 Date: Tue, 13 Aug 2013 13:12:42 +0200 Source: mussort Binary: mussort Architecture: source all Version: 0.3-1 Distribution: unstable Urgency: low Maintainer: Sascha Steinbiss sa...@tetrinetsucht.de Changed-By: Sascha Steinbiss sa

Accepted aragorn 1.2.36-1 (source amd64)

2013-04-12 Thread Sascha Steinbiss
Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: aragorn- tRNA and tmRNA detection in nucleotide sequences Closes: 701571 Changes: aragorn (1.2.36-1) unstable; urgency=low . * Initial release (Closes: #701571) Checksums-Sha1: 0367656a7fac07edd37ae31ae038fb705e3f8d4a

Accepted ltrsift 1.0.2-1 (source amd64 all)

2013-03-11 Thread Sascha Steinbiss
-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: ltrsift- postprocessing and classification of LTR retrotransposons ltrsift-dbg - postprocessing and classification of LTR retrotransposons, with d ltrsift-examples - example data for LTRsift

Accepted genometools 1.5.1-1 (source amd64 all)

2013-03-07 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools

Accepted genometools 1.5.0-2 (source amd64 all)

2013-02-18 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools

Accepted genometools 1.5.0-1 (source amd64 all)

2013-02-15 Thread Sascha Steinbiss
Distribution: unstable Urgency: low Maintainer: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools genometools-dbg - versatile genome

Accepted ltrsift 1.0.1-1 (source amd64 all)

2012-11-17 Thread Sascha Steinbiss
...@lists.alioth.debian.org Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: ltrsift- postprocessing and classification of LTR retrotransposons ltrsift-dbg - postprocessing and classification of LTR retrotransposons, with d ltrsift-examples - example data for LTRsift

Accepted genometools 1.4.2-3 (source amd64 all)

2012-10-09 Thread Sascha Steinbiss
Urgency: low Maintainer: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools genometools-dbg - versatile genome analysis toolkit

Accepted genometools 1.4.2-4 (source amd64 all)

2012-10-09 Thread Sascha Steinbiss
Urgency: low Maintainer: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools genometools-dbg - versatile genome analysis toolkit

Accepted genometools 1.4.2-2 (source amd64 all)

2012-10-08 Thread Sascha Steinbiss
Urgency: low Maintainer: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools genometools-dbg - versatile genome analysis toolkit

Accepted genometools 1.4.2-1 (source amd64 all)

2012-10-07 Thread Sascha Steinbiss
Urgency: low Maintainer: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools genometools-dbg - versatile genome analysis toolkit

Accepted genometools 1.4.1-1 (source all amd64)

2012-07-31 Thread Sascha Steinbiss
Urgency: low Maintainer: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Changed-By: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Description: genometools - versatile genome analysis toolkit genometools-common - shared data files for GenomeTools genometools-dbg - versatile genome analysis toolkit

<    3   4   5   6   7   8