Accepted njplot 2.0-2 (source i386)

2007-11-12 Thread Andreas Tille
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Format: 1.7 Date: Wed, 07 Nov 2007 08:04:06 +0100 Source: njplot Binary: njplot Architecture: source i386 Version: 2.0-2 Distribution: unstable Urgency: low Maintainer: Debian-Med Packaging Team [EMAIL PROTECTED] Changed-By: Andreas Tille [EMAIL

Accepted wordnet 1:3.0-6 (source all i386)

2007-11-12 Thread Andreas Tille
: Andreas Tille [EMAIL PROTECTED] Changed-By: Andreas Tille [EMAIL PROTECTED] Description: dict-wn- electronic lexical database of English language for dict wordnet- electronic lexical database of English language wordnet-base - electronic lexical database of English language wordnet-dev

Accepted mummer 3.20-1 (source i386 all)

2007-11-12 Thread Andreas Tille
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Format: 1.7 Date: Wed, 07 Nov 2007 13:25:34 +0100 Source: mummer Binary: mummer-doc mummer Architecture: source i386 all Version: 3.20-1 Distribution: unstable Urgency: low Maintainer: Debian-Med Packaging Team [EMAIL PROTECTED] Changed-By: Andreas

Accepted ginkgocadx 2.8.0.4602-1 (source amd64)

2012-01-29 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: ginkgocadx - Medical Imaging Software and complete DICOM Viewer Closes: 657827 Changes: ginkgocadx (2.8.0.4602-1) unstable; urgency=low . * New upstream version (adapted patch, removed patch applied upstream) Closes: #657827

Accepted phy-spread 1.0.2-1 (source all)

2012-01-29 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: phy-spread - analyze and visualize phylogeographic reconstructions Closes: 657585 Changes: phy-spread (1.0.2-1) unstable; urgency=low . * Initial release. (Closes: #657585) Checksums-Sha1: ec17ed6cf438aa6c914e1554bafc520aa7cfc80c 1566

Accepted sitplus 1.0.1-3 (source all amd64)

2012-02-02 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: sitplus- Free software framework for ludic-therapeutic activities sitplus-data - Data files for Sitplus, a framework for ludic-therapeutic activit Closes: 653799 Changes: sitplus (1.0.1-3) unstable; urgency=low

Accepted feh 2.3-1 (source amd64)

2012-02-02 Thread Andreas Tille
-By: Andreas Tille ti...@debian.org Description: feh- imlib2 based image viewer Changes: feh (2.3-1) unstable; urgency=low . * New upstream version Checksums-Sha1: 086147d85c985453aedd62b8ae45e0f2c96ab37c 1408 feh_2.3-1.dsc 9f42ba920baeb405777f834546223a9ff9eb43e7 2226269 feh_2.3

Accepted feh 2.3-2 (source amd64)

2012-02-03 Thread Andreas Tille
-By: Andreas Tille ti...@debian.org Description: feh- imlib2 based image viewer Closes: 658497 Changes: feh (2.3-2) unstable; urgency=low . * Enable hardening flags (thanks to Simon Ruderich si...@ruderich.org for the patch) Closes: #658497 * Removed quilt from Build-Depends

Accepted gnumed-client 1.1.11-1 (source all)

2012-02-03 Thread Andreas Tille
Team debian-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: gnumed-client - medical practice management - Client gnumed-client-de - medical practice management - Client for German users gnumed-common - medical practice management - common files gnumed

Accepted gnumed-server 16.11-1 (source all)

2012-02-03 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: gnumed-server - medical practice management - server Changes: gnumed-server (16.11-1) unstable; urgency=low . * New upstream version Checksums-Sha1: fcf4cdca04eafd470f7d48bc17da40a24fae7cfa 1420 gnumed-server_16.11-1.dsc

Accepted mrbayes 3.2.0+dfsg-1 (source all amd64)

2012-02-03 Thread Andreas Tille
debian-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: mrbayes- Bayesian Inference of Phylogeny mrbayes-dbg - Bayesian Inference of Phylogeny - debug symbols mrbayes-doc - Bayesian Inference of Phylogeny - manual mrbayes-mpi - Bayesian Inference

Accepted phy-spread 1.0.3-1 (source all)

2012-02-05 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: phy-spread - analyze and visualize phylogeographic reconstructions Changes: phy-spread (1.0.3-1) unstable; urgency=low . [ Charles Plessy ] * debian/upstream-metadata.yaml renamed to debian/upstream . [ Andreas Tille ] * New

Accepted gnumed-client 1.1.12-1 (source all)

2012-02-09 Thread Andreas Tille
Team debian-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: gnumed-client - medical practice management - Client gnumed-client-de - medical practice management - Client for German users gnumed-common - medical practice management - common files gnumed

Accepted gnumed-server 16.12-1 (source all)

2012-02-09 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: gnumed-server - medical practice management - server Changes: gnumed-server (16.12-1) unstable; urgency=low . * New upstream version Checksums-Sha1: 17ded4567ff22eb2051c84774cb9f10652efbfea 1420 gnumed-server_16.12-1.dsc

Accepted arb 5.3-3 (source all amd64)

2012-02-09 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: arb- Integrated package for sequence database handling and analysis arb-common - Integrated package for sequence database handling and analysis arb-doc- Integrated package for sequence database handling

Accepted ginkgocadx 2.6.0.0-1 (source amd64)

2011-12-18 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: ginkgocadx - Medical Imaging Software and complete DICOM Viewer Closes: 652529 Changes: ginkgocadx (2.6.0.0-1) unstable; urgency=low . * New upstream version (refreshed patches) * debian/copyright: Added Upstream-Contact

Accepted fastlink 4.1P-fix95-3 (source all amd64)

2011-12-19 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: fastlink - faster version of pedigree programs of Linkage fastlink-doc - Some papers about fastlink Closes: 639998 Changes: fastlink (4.1P-fix95-3) unstable; urgency=low . * Replaced debian/*.desktop by debian/menu

Accepted ncbi-blast+ 2.2.25-7 (source all amd64)

2011-12-21 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: ncbi-blast+ - next generation suite of BLAST sequence search tools ncbi-blast+-legacy - NCBI Blast legacy call script Closes: 644237 Changes: ncbi-blast+ (2.2.25-7) unstable; urgency=low . * Do not output

Accepted cd-hit 4.5.7-1 (source amd64)

2011-12-22 Thread Andreas Tille
-By: Andreas Tille ti...@debian.org Description: cd-hit - suite of programs designed to quickly group sequences Closes: 651983 652074 Changes: cd-hit (4.5.7-1) unstable; urgency=low . * Initial release (Closes: #652074) * This package is recommended by the package qiime and thus

Accepted njplot 2.3-4 (source amd64)

2011-12-23 Thread Andreas Tille
-By: Andreas Tille ti...@debian.org Description: njplot - phylogenetic tree drawing program Closes: 653001 Changes: njplot (2.3-4) unstable; urgency=low . * Fix FTBFS with -Werror=format-security (Thanks for the patch to Ilya Barygin randomact...@ubuntu.com) Closes: #653001

Accepted texmaker 3.2-1 (source all amd64)

2011-12-23 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: texmaker - cross-platform LaTeX editor texmaker-data - Texmaker LaTeX editor -- arch-independent files Changes: texmaker (3.2-1) unstable; urgency=low . * New upstream version (updated patches and removed patches

Accepted acedb 4.9.39+dfsg.01-5 (source amd64)

2011-12-24 Thread Andreas Tille
debian-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: acedb-other - retrieval of DNA or protein sequences acedb-other-belvu - multiple sequence alignment editor acedb-other-dotter - visualisation of sequence similarity Closes: 650471 Changes: acedb

Accepted mssstest 3.0-3 (source amd64)

2011-12-24 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: mssstest - Normalisation of disease scores for patients with Multiple Sclero Closes: 450107 Changes: mssstest (3.0-3) unstable; urgency=low . * Finally removed debian/watch because upstream does not seem to release new versions

Accepted sigma-align 1.1.3-3 (source amd64)

2011-12-24 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: sigma-align - Simple greedy multiple alignment of non-coding DNA sequences Closes: 652922 Changes: sigma-align (1.1.3-3) unstable; urgency=low . * Fix bug in long description Closes: #652922 Checksums-Sha1

Accepted seaview 1:4.3.3-3 (source amd64)

2012-03-06 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: seaview- Multiplatform interface for sequence alignment and phylogeny Closes: 662818 Changes: seaview (1:4.3.3-3) unstable; urgency=low . * debian/control: drop cdbs Build-Dependency * debian/rules: switch to short dh * debian

Accepted raster3d 3.0-2-4 (source all amd64)

2012-03-07 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: raster3d - tools for generating images of proteins or other molecules raster3d-doc - documents and example files for Raster3D Closes: 662490 Changes: raster3d (3.0-2-4) unstable; urgency=low . [ Charles Plessy

Accepted poa 2.0+20060928-3 (source amd64)

2012-03-08 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: poa- Partial Order Alignment for multiple sequence alignment Changes: poa (2.0+20060928-3) unstable; urgency=low . [ Charles Plessy ] * Updated my email address. . [ David Paleino ] * Removed myself from Uploaders

Accepted last-align 193-1 (source amd64)

2012-03-08 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: last-align - genome-scale comparison of biological sequences Changes: last-align (193-1) unstable; urgency=low . * New upstream version * debian/upstream: Removed duplicate entries for DOI/PMID * debian/control: Standards-Version

Accepted mothur 1.23.1-1 (source amd64)

2012-03-08 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: mothur - sequence analysis suite for research on microbiota Changes: mothur (1.23.1-1) unstable; urgency=low . * New upstream version (including updating patches) * debian/upstream: - fixed typo: s/TITILE/TITLE/ - Moved DOI

Accepted tm-align 20120124-1 (source amd64)

2012-03-08 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: tm-align - structual alignment of proteins Changes: tm-align (20120124-1) unstable; urgency=low . [ Charles Plessy ] * debian/upstream: renamed from upstream-metadata.yaml . [ Andreas Tille ] * New upstream version

Accepted texmaker 3.3.2-1 (source all amd64)

2012-03-12 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: texmaker - cross-platform LaTeX editor texmaker-data - Texmaker LaTeX editor -- arch-independent files Changes: texmaker (3.3.2-1) unstable; urgency=low . * New upstream version (patches updated) Checksums-Sha1

Accepted blimps 3.9-1 (source amd64)

2012-03-13 Thread Andreas Tille
-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: blimps-examples - blocks database improved searcher (example data) blimps-utils - blocks database improved searcher libblimps3 - blocks database improved searcher library libblimps3-dev - blocks

Accepted qiime 1.3.0-3 (source all amd64)

2012-03-20 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: qiime - Quantitative Insights Into Microbial Ecology qiime-doc - Quantitative Insights Into Microbial Ecology (tutorial) Closes: 663889 Changes: qiime (1.3.0-3) unstable; urgency=low . [ Charles Plessy ] * renamed debian

Accepted qiime 1.4.0-1 (source all amd64)

2012-03-20 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: qiime - Quantitative Insights Into Microbial Ecology qiime-doc - Quantitative Insights Into Microbial Ecology (tutorial) Changes: qiime (1.4.0-1) unstable; urgency=low . * New upstream version (updated patches) * debian

Accepted cimg 1.4.9-2 (source all)

2012-03-21 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: cimg-dev - powerful image processing library cimg-doc - documentation of cimg-dev imaging library cimg-examples - examples for cimg-dev imaging library Closes: 652770 Changes: cimg (1.4.9-2) unstable; urgency=low

Accepted r-bioc-hilbertvis 1.13.1-1 (source amd64)

2012-03-23 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: r-bioc-hilbertvis - GNU R package to visualise long vector data Changes: r-bioc-hilbertvis (1.13.1-1) unstable; urgency=low . * New upstream version * debian/control: - Standards-Version: 3.9.3 (no changes needed

Accepted qtl 1.23-16-1 (source amd64)

2012-03-23 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: r-cran-qtl - GNU R package for genetic marker linkage analysis Changes: qtl (1.23-16-1) unstable; urgency=low . * New upstream version * debian/control: - Standards-Version: 3.9.3 (no changes needed) - Build-Depends: r-base-dev

Accepted theseus 1.6.2-1 (source amd64)

2012-03-24 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: theseus- superimpose macromolecules using maximum likelihood Changes: theseus (1.6.2-1) unstable; urgency=low . * New upstream version (adapted patch) * debian/control: - Standards-Version: 3.9.3 (no changes needed) - Fixed

Accepted libcomplearn 1.1.7-2 (source amd64)

2012-03-26 Thread Andreas Tille
Distribution: unstable Urgency: low Maintainer: Debian Science Team debian-science-maintain...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: complearn-tools - complearn machine-learning command-line utilities libcomplearn-dev - machine-learning through data

Accepted r-cran-epi 1.1.33-1 (source amd64)

2012-03-26 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: r-cran-epi - GNU R epidemiological analysis Changes: r-cran-epi (1.1.33-1) unstable; urgency=low . * New upstream version * debian/upstream: Add References * debian/control: - Standards-Version: 3.9.3 (no changes needed

Accepted r-cran-epicalc 2.14.1.6-1 (source all)

2012-03-26 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: r-cran-epicalc - GNU R Epidemiological calculator Changes: r-cran-epicalc (2.14.1.6-1) unstable; urgency=low . * New upstream version * debian/control: - Standards-Version: 3.9.3 (no changes needed) - Build

Accepted r-cran-epir 0.9-38-1 (source all)

2012-03-26 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: r-cran-epir - GNU R Functions for analysing epidemiological data Changes: r-cran-epir (0.9-38-1) unstable; urgency=low . * New upstream version * debian/control: - Standards-Version: 3.9.3 (no changes needed) - Build

Accepted r-cran-msm 1.1-1 (source amd64)

2012-03-26 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: r-cran-msm - GNU R Multi-state Markov and hidden Markov models in continuous t Changes: r-cran-msm (1.1-1) unstable; urgency=low . * New upstream version * debian/control: - Standards-Version: 3.9.3 (no changes needed

Accepted gwyddion 2.26-2 (source all amd64)

2012-03-29 Thread Andreas Tille
Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: gwyddion - Scanning Probe Microscopy visualization and analysis tool gwyddion-common - architecture-independent files for Gwyddion SPM analysis tool

Accepted proda 1.0-8 (source amd64)

2012-03-29 Thread Andreas Tille
-By: Andreas Tille ti...@debian.org Description: proda - multiple alignment of protein sequences Changes: proda (1.0-8) unstable; urgency=low . [ Charles Plessy ] * Documented information in ‘debian/upstream’. * Removed mention of the bibliographic reference in ‘debian/control

Accepted seq-gen 1.3.3-1 (source amd64)

2012-03-29 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: seq-gen- simulate the evolution of nucleotide or amino acid sequences Changes: seq-gen (1.3.3-1) unstable; urgency=low . [ Alexandre Mestiashvili ] * New upstream release 1.3.3 * debian/control section changed to non-free/science

Accepted tree-puzzle 5.2-7 (source all amd64)

2011-12-06 Thread Andreas Tille
-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: tree-ppuzzle - Parallelized reconstruction of phylogenetic trees by maximum like tree-puzzle - Reconstruction of phylogenetic trees by maximum likelihood tree-puzzle-doc - Reconstruction of phylogenetic

Accepted fastdnaml 1.2.2-10 (source amd64)

2011-12-06 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: fastdnaml - Tool for construction of phylogenetic trees of DNA sequences Closes: 639996 Changes: fastdnaml (1.2.2-10) unstable; urgency=low . * debian/control: - Use ftp download site as homepage - Fixed Vcs fields

Accepted mothur 1.22.2-2 (source amd64)

2011-12-06 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: mothur - sequence analysis suite for research on microbiota Closes: 650683 Changes: mothur (1.22.2-2) unstable; urgency=low . * debian/patches/kfreebsd.patch: Enable build on BSD machines (thanks to Christoph Egger christ

Accepted mgltools-pmv 1.5.6~rc2+cvs.20110926-2 (source all)

2011-12-07 Thread Andreas Tille
-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: mgltools-pmv - Python-based Molecular Viewer mgltools-pmv-test - Python-based Molecular Viewer (functionality tests) Closes: 633362 Changes: mgltools-pmv (1.5.6~rc2+cvs.20110926-2) unstable; urgency

Accepted gnumed-server 16.7-1 (source all)

2011-12-07 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: gnumed-server - medical practice management - server Changes: gnumed-server (16.7-1) unstable; urgency=low . * New upstream version Checksums-Sha1: d0817dfe020123feaea23239a8c671c131bd2ad4 1413 gnumed-server_16.7-1.dsc

Accepted gnumed-client 1.1.7-1 (source all)

2011-12-07 Thread Andreas Tille
debian-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: gnumed-client - medical practice management - Client gnumed-client-de - medical practice management - Client for German users gnumed-common - medical practice management - common files gnumed

Accepted mira 3.4.0.1-1 (source all amd64)

2011-12-08 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: mira-assembler - Whole Genome Shotgun and EST Sequence Assembler mira-doc - documentation for the mira assembler mira-examples - files to experiment with the mira assembler Closes: 648762 649093 Changes: mira

Accepted gdpc 2.2.5-2 (source all amd64)

2011-12-08 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: gdpc - visualiser of molecular dynamic simulations gdpc-examples - example files for the gdpc program Closes: 642094 Changes: gdpc (2.2.5-2) unstable; urgency=low . * Do not use -DGDK_DISABLE_DEPRECATED (Thanks to Colin

Accepted raster3d 3.0-2-3 (source all amd64)

2011-12-09 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: raster3d - tools for generating images of proteins or other molecules raster3d-doc - documents and example files for Raster3D Closes: 634284 Changes: raster3d (3.0-2-3) unstable; urgency=low . * Standards-Version: 3.9.2

Accepted python-pynast 1.1-3 (source all)

2011-12-11 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: pynast - alignment of short DNA sequences Changes: python-pynast (1.1-3) unstable; urgency=low . [ Steffen Moeller ] * Rendering Tim's fixes available for Debian * Moving pynast from contrib to main. The dependency cogent got

Accepted qiime 1.3.0-2 (source all amd64)

2011-12-11 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: qiime - Quantitative Insights Into Microbial Ecology qiime-doc - Quantitative Insights Into Microbial Ecology (tutorial) Closes: 639389 Changes: qiime (1.3.0-2) unstable; urgency=low . * debian/control: - Added myself

Accepted exonerate 2.2.0-3 (source amd64)

2011-12-12 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: exonerate - generic tool for pairwise sequence comparison Closes: 651802 Changes: exonerate (2.2.0-3) unstable; urgency=low . [ Charles Plessy ] * Documented some meta-information in ‘debian/upstream-metadata.yaml’. . [ Andreas

Accepted libtecla 1.6.1-2 (source amd64)

2011-12-13 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: libtecla1 - interactive command line editing facilities libtecla1-dev - interactive command line editing facilities (development) Closes: 621887 Changes: libtecla (1.6.1-2) unstable; urgency=low . * debian/patches

Accepted sofa-framework 1.0~beta4-6 (source all amd64)

2011-12-13 Thread Andreas Tille
: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: libsofa1 - Simulation Open Framework Architecture - runtime libsofa1-dev - Simulation Open Framework Architecture - development sofa-apps - GUI for the Simulation Open

Accepted libtecla 1.6.1-3 (source amd64)

2011-12-13 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: libtecla1 - interactive command line editing facilities libtecla1-dev - interactive command line editing facilities (development) Closes: 621887 Changes: libtecla (1.6.1-3) unstable; urgency=low . * Use autotools properly

Accepted libtecla 1.6.1-4 (source amd64)

2011-12-13 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: libtecla1 - interactive command line editing facilities libtecla1-dev - interactive command line editing facilities (development) Closes: 621887 651937 Changes: libtecla (1.6.1-4) unstable; urgency=low . * debian/patches

Accepted bioperl 1.6.901-2 (source all)

2011-12-14 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: bioperl- Perl tools for computational molecular biology libbio-perl-perl - BioPerl core perl modules Closes: 650412 Changes: bioperl (1.6.901-2) unstable; urgency=low . [ Luca Capello ] * debian/control: + add

Accepted libtecla 1.6.1-5 (source amd64)

2011-12-15 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: libtecla1 - interactive command line editing facilities libtecla1-dev - interactive command line editing facilities (development) Closes: 621887 Changes: libtecla (1.6.1-5) unstable; urgency=low . * debian/rules: Another

Accepted arb 5.3-2 (source all amd64)

2011-12-15 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: arb- Integrated package for sequence database handling and analysis arb-common - Integrated package for sequence database handling and analysis arb-doc- Integrated package for sequence database handling

Accepted aeskulap 0.2.2b1-9 (source amd64)

2011-12-15 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: aeskulap - medical image viewer and DICOM network client Closes: 607535 Changes: aeskulap (0.2.2b1-9) unstable; urgency=low . * debian/patches/30_as_needed.patch: Apply Fix from Ubunto to build with --as-needed (Thanks to Stefan

Accepted epigrass 2.0.4-3 (source all)

2011-12-16 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: epigrass - scientific tool for simulations and scenario analysis in network epigrass-doc - Documentation for EpiGrass, a network epidemiology tool Closes: 640005 Changes: epigrass (2.0.4-3) unstable; urgency=low . * debian

Accepted sigma-align 1.1.3-2 (source amd64)

2011-12-16 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: sigma-align - Simple greedy multiple alignment of non-coding DNA sequences Closes: 644663 Changes: sigma-align (1.1.3-2) unstable; urgency=low . [ Charles Plessy ] * Documented information in ‘debian/upstream-metadata.yaml

Accepted debian-med 1.10 (source all)

2011-12-16 Thread Andreas Tille
med-rehabilitation med-statistics med-tools med-typesetting Architecture: source all Version: 1.10 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: med-bio- Debian

Accepted r-other-mott-happy 2.1-6 (source amd64)

2011-12-17 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: r-other-mott-happy - GNU R package for fine-mapping complex diseases Closes: 622295 Changes: r-other-mott-happy (2.1-6) unstable; urgency=low . [ Steffen Möller ] * debian/control: - Build-Depends: r-cran

Accepted r-other-mott-happy 2.1-7 (source amd64)

2011-12-17 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: r-other-mott-happy - GNU R package for fine-mapping complex diseases Changes: r-other-mott-happy (2.1-7) unstable; urgency=low . * debian/control: Somehow missed dependencies from 2.1-5 - added again * Added

Accepted debian-science 0.15 (source all)

2011-12-18 Thread Andreas Tille
: source all Version: 0.15 Distribution: unstable Urgency: low Maintainer: Debian Science Team debian-science-maintain...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: science-astronomy - Debian Science Astronomy packages science-astronomy-dev - Debian Science

Accepted feh 2.2-1 (source amd64)

2012-01-02 Thread Andreas Tille
-By: Andreas Tille ti...@debian.org Description: feh- imlib2 based image viewer Closes: 653689 Changes: feh (2.2-1) unstable; urgency=low . * New upstream version (+ adapted patch) Closes: #653689 Checksums-Sha1: 3fec0157b89469ecfa3cf9e7abcc013d0575 1408 feh_2.2-1.dsc

Accepted aeskulap 0.2.2b1-10 (source amd64)

2012-01-02 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: aeskulap - medical image viewer and DICOM network client Closes: 607535 Changes: aeskulap (0.2.2b1-10) unstable; urgency=low . * Follow the advise to use dh-autoreconf (control+rules) of Julian Taylor jtaylor.deb

Accepted dicompyler 0.4.1-1-1 (source all)

2012-01-03 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: dicompyler - radiation therapy research platform Changes: dicompyler (0.4.1-1-1) unstable; urgency=low . * New upstream version * debian/watch: Adapted to new versioning scheme * debian/install: Adapted to new directory layout

Accepted gnumed-server 16.9-1 (source all)

2012-01-03 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: gnumed-server - medical practice management - server Changes: gnumed-server (16.9-1) unstable; urgency=low . * New upstream version Checksums-Sha1: 63d269e43fa7671e9d3a2c11a3fb1cfdedd6bcc1 1413 gnumed-server_16.9-1.dsc

Accepted squizz 0.99a-2 (source amd64)

2012-01-05 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: libsquizz - Conversion libs used by squizz genetic sequence converter libsquizz-dev - development tools for squizz genetic sequence converter squizz - Converter for genetic sequences and alignments Closes: 625929

Accepted exonerate 2.2.0-4 (source amd64)

2012-01-06 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: exonerate - generic tool for pairwise sequence comparison Closes: 651802 Changes: exonerate (2.2.0-4) unstable; urgency=low . * Use autotools_dev properly Closes: #651802 Checksums-Sha1: e6af23d4c3e37c3fe15f866581c7432c7e3c5782

Accepted boxshade 3.3.1-6 (source amd64)

2012-01-07 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: boxshade - Pretty-printing of multiple sequence alignments Closes: 650473 Changes: boxshade (3.3.1-6) unstable; urgency=low . [ Mathieu Malaterre ] * debian/get-orig-source: Add GZIP=--no-name option to enable identical tarballs

Accepted clonalframe 1.2-3 (source amd64)

2012-01-07 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: clonalframe - inference of bacterial microevolution using multilocus sequence d Closes: 650474 Changes: clonalframe (1.2-3) unstable; urgency=low . [ A. Costa ] * Corrected typos in debian/ClonalFrame.1 (Closes: #650474

Accepted amide 1.0.1-1 (source amd64)

2012-01-09 Thread Andreas Tille
-By: Andreas Tille ti...@debian.org Description: amide - software for Medical Imaging Changes: amide (1.0.1-1) unstable; urgency=low . * debian/README.source: removed because it is redundant * debian/control: - Fixed Vcs-Svn - Removed quilt from Build-Depends * debian

Accepted exonerate 2.2.0-5 (source amd64)

2012-01-12 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: exonerate - generic tool for pairwise sequence comparison Changes: exonerate (2.2.0-5) unstable; urgency=low . * Rather use dh-autoreconf as advised in another patch from Micah Gersten mic...@ubuntu.com (thanks for your patience

Accepted exonerate 2.2.0-6 (source amd64)

2012-01-12 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: exonerate - generic tool for pairwise sequence comparison Changes: exonerate (2.2.0-6) unstable; urgency=low . * debian/patches/autoreconf.patch: Removed because not needed when using dh-autoreconf Checksums-Sha1

Accepted jai-imageio-core 1.2-2 (source all amd64)

2012-01-13 Thread Andreas Tille
Team debian-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: libjai-imageio-core-java - Java Advanced Imaging Image I/O Tools API core libjai-imageio-core-java-doc - Java Advanced Imaging Image I/O Tools API core (documentation) Closes: 655675

Accepted jai-core 1.1.4-2 (source all amd64)

2012-01-13 Thread Andreas Tille
-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: libjai-core-java - Java Advanced Imaging API reference implementation libjai-core-java-doc - Java Advanced Imaging API reference implementation (documentation Closes: 655544 Changes: jai-core (1.1.4-2

Accepted texmaker 3.3.1-1 (source all amd64)

2012-02-28 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: texmaker - cross-platform LaTeX editor texmaker-data - Texmaker LaTeX editor -- arch-independent files Changes: texmaker (3.3.1-1) unstable; urgency=low . * New upstream version (incl. adapting patch

Accepted r-cran-haplo.stats 1.5.5-1 (source amd64)

2012-02-28 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: r-cran-haplo.stats - GNU R package for haplotype analysis Changes: r-cran-haplo.stats (1.5.5-1) unstable; urgency=low . * New upstream version * debian/control: - Standards-Version: 3.9.3 (no changes needed

Accepted sitplus 1.0.1-4 (source all amd64)

2012-02-28 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: sitplus- Free software framework for ludic-therapeutic activities sitplus-data - Data files for Sitplus, a framework for ludic-therapeutic activit Closes: 661403 Changes: sitplus (1.0.1-4) unstable; urgency=low

Accepted clustalw-mpi 0.15-2 (source amd64)

2012-03-01 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: clustalw-mpi - MPI-distributed global sequence alignment with ClustalW Closes: 661740 Changes: clustalw-mpi (0.15-2) unstable; urgency=low . * debian/control: - Fixed Vcs-Fields - Updated Standards-Version to 3.9.3

Accepted aeskulap 0.2.2b1-11 (source amd64)

2012-03-05 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: aeskulap - medical image viewer and DICOM network client Closes: 662252 Changes: aeskulap (0.2.2b1-11) unstable; urgency=low . * enable hardening flags by bumping debhelper compat version to 9 (thanks for the patch to Simon

Accepted libhmsbeagle 1.0-5 (source amd64)

2012-03-05 Thread Andreas Tille
-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: libhmsbeagle-dev - High-performance lib for Bayesian and Maximum Likelihood phylogen libhmsbeagle-java - High-performance lib for Bayesian and Maximum Likelihood phylogen libhmsbeagle1 - High

Accepted libzerg 1.0.7-3 (source amd64)

2012-01-20 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: libzerg0 - C library for parsing the output of NCBI BLAST programs libzerg0-dbg - debugging symbols for libzerg libzerg0-dev - C library for parsing the output of NCBI BLAST programs Changes: libzerg (1.0.7-3

Accepted liboptions-java 0.0.20120113-1 (source all)

2012-01-20 Thread Andreas Tille
-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: liboptions-java - command line option parsing library for Java liboptions-java-doc - command line option parsing library for Java (documentation) Closes: 656199 Changes: liboptions-java (0.0.20120113-1

Accepted libhmsbeagle 1.0-1 (source all amd64)

2012-01-20 Thread Andreas Tille
debian-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: libhmsbeagle-dev - High-performance lib for Bayesian and Maximum Likelihood phylogen libhmsbeagle-java - High-performance lib for Bayesian and Maximum Likelihood phylogen libhmsbeagle1 - High

Accepted libhmsbeagle 1.0-2 (source all amd64)

2012-01-21 Thread Andreas Tille
debian-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: libhmsbeagle-dev - High-performance lib for Bayesian and Maximum Likelihood phylogen libhmsbeagle-java - High-performance lib for Bayesian and Maximum Likelihood phylogen libhmsbeagle1 - High

Accepted libhmsbeagle 1.0-3 (source all amd64)

2012-01-21 Thread Andreas Tille
debian-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: libhmsbeagle-dev - High-performance lib for Bayesian and Maximum Likelihood phylogen libhmsbeagle-java - High-performance lib for Bayesian and Maximum Likelihood phylogen libhmsbeagle1 - High

Accepted mpj 0.38~dfsg-1 (source amd64)

2012-01-22 Thread Andreas Tille
Changed-By: Andreas Tille ti...@debian.org Description: libmpj-java - Java library for parallel applications for multicore processors a Closes: 656790 Changes: mpj (0.38~dfsg-1) unstable; urgency=low . * Initial release (Closes: #656790) Checksums-Sha1

Accepted gnumed-client 1.1.10-1 (source all)

2012-01-23 Thread Andreas Tille
Team debian-med-packag...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: gnumed-client - medical practice management - Client gnumed-client-de - medical practice management - Client for German users gnumed-common - medical practice management - common files gnumed

Accepted gnumed-server 16.10-1 (source all)

2012-01-23 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: gnumed-server - medical practice management - server Changes: gnumed-server (16.10-1) unstable; urgency=low . * New upstream version Checksums-Sha1: 77df84b3df50573e28239b30e45541612bc00c99 1420 gnumed-server_16.10-1.dsc

Accepted colt 1.2.0~nojar-1 (source all amd64)

2012-01-24 Thread Andreas Tille
...@lists.alioth.debian.org Changed-By: Andreas Tille ti...@debian.org Description: libcolt-java - scalable scientific and technical computing in Java libcolt-java-doc - scalable scientific and technical computing in Java (doc) Closes: 656741 Changes: colt (1.2.0~nojar-1) unstable; urgency=low

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