Accepted ncbi-blast+ 2.2.25-1 (source all amd64)

-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: ncbi-blast+ - next generation suite of BLAST sequence search tools ncbi-blast+-legacy - NCBI Blast legacy call script Closes: 624394 Changes: ncbi-blast+ (2.2.25-1) unstable; urgency=low . * Initial

Accepted gbrowse 2.38~dfsg-1 (source all amd64)

-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: gbrowse- The GMOD Generic Genome Browser gbrowse-calign - CAlign helper gbrowse-data - Sample data to use GBrowse Changes: gbrowse (2.38~dfsg-1) unstable; urgency=low . * New upstream

Accepted biomaj 1.1.0-2 (source all)

-By: Olivier Sallou olivier.sal...@irisa.fr Description: biomaj - Biological banks updater Closes: 623558 623807 624284 Changes: biomaj (1.1.0-2) unstable; urgency=low . * Add russian translation of debconf: Thanks to Yuri Kozlov yu...@komyakino.ru Closes: #623807 * debian

Accepted squizz 0.99a-1 (source amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: libsquizz - Conversion libs used by squizz libsquizz-dev - Libraries and includes for development squizz - Sequence/alignment converter Closes: 618689 Changes: squizz (0.99a-1) unstable; urgency=low

Accepted biomaj 1.1.0-1 (source all)

-By: Olivier Sallou olivier.sal...@irisa.fr Description: biomaj - Biological banks updater Closes: 609038 Changes: biomaj (1.1.0-1) unstable; urgency=low . * Initial release (Closes: #609038) First Debian package, fixed copyright file to list all licenses Checksums-Sha1

Accepted biomaj 1.1.0-3 (source all)

-By: Olivier Sallou olivier.sal...@irisa.fr Description: biomaj - Biological banks updater Closes: 628927 629455 632952 633523 Changes: biomaj (1.1.0-3) unstable; urgency=low . * Change priority in debconf message for jdk home * Add spanish translation of debconf: Thanks

Accepted libmath-vecstat-perl 0.08-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: libmath-vecstat-perl - module providing some basic numeric stats on vectors Closes: 632086 Changes: libmath-vecstat-perl (0.08-1) unstable; urgency=low . * First import to Debian (Closes: #632086 ). Checksums-Sha1

Accepted fonts-cmu 0.7.0-2 (source all)

-By: Olivier Sallou olivier.sal...@irisa.fr Description: fonts-cmu - sets the computer modern unicode fonts Changes: fonts-cmu (0.7.0-2) unstable; urgency=low . * Add more detailled copyright info Checksums-Sha1: c1feda56472b2987dda75f253a364da82c1272f2 1917 fonts-cmu_0.7.0-2.dsc

Accepted gbrowse 2.39~dfsg-2 (source all amd64)

-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: gbrowse- The GMOD Generic Genome Browser gbrowse-calign - CAlign helper gbrowse-data - Sample data to use GBrowse Changes: gbrowse (2.39~dfsg-2) unstable; urgency=low . * Skip deferred

Accepted gbrowse 2.39~dfsg-1 (source all amd64)

-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: gbrowse- The GMOD Generic Genome Browser gbrowse-calign - CAlign helper gbrowse-data - Sample data to use GBrowse Changes: gbrowse (2.39~dfsg-1) unstable; urgency=low . * New upstream

Accepted biomaj-watcher 1.0-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: biomaj-watcher - BioMAJ web interface Closes: 609038 Changes: biomaj-watcher (1.0-1) unstable; urgency=low . * Initial release (Closes: #609038). Checksums-Sha1: e2f8c42577a054cae16c62443aa1c3df4f760b70 1634 biomaj

Accepted fonts-cmu 0.7.0-1 (source all)

-By: Olivier Sallou olivier.sal...@irisa.fr Description: fonts-cmu - sets the computer modern unicode fonts Closes: 620537 Changes: fonts-cmu (0.7.0-1) unstable; urgency=low . * Initial release (Closes: #620537) Checksums-Sha1: 6ed53059f6f46c52c4c317e4c0ab694ddf522bf6 1894 fonts-cmu_0.7.0-1

Accepted circos 0.55-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: circos - Package for visualizing data and information otf-symbols-circos - Fonts used by default in Circos Closes: 632174 Changes: circos (0.55-1) unstable; urgency=low . * First debian import (Closes: #632174

Accepted circos-tools 0.16-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: circos-tools - Helper tools for Circos Closes: 632174 Changes: circos-tools (0.16-1) unstable; urgency=low . * First debian import (Closes: #632174) Checksums-Sha1: 947223ce96f15dfcf7ee8503c1861a5962621b38 1950 circos

Accepted biomaj 1.2.0-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: biomaj - Biological banks updater biomaj-properties - bank properties file examples Changes: biomaj (1.2.0-1) unstable; urgency=low . * New upstream release with new features and bug fixes. * Change in database

Accepted biomaj-watcher 1.2.0-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: biomaj-watcher - BioMAJ web interface Closes: 640057 640096 Changes: biomaj-watcher (1.2.0-1) unstable; urgency=low . * New upstream release with new features (multi tenant, private banks...) * Spanish translation

Accepted biomaj-watcher 1.2.0-2 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: biomaj-watcher - BioMAJ web interface Changes: biomaj-watcher (1.2.0-2) unstable; urgency=low . * Fix patch, login and jobs location not taken into account in context xml. Checksums-Sha1

Accepted pycaptcha 0.4-1 (source all)

Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: python-captcha - collection of Python modules implementing CAPTCHAs Closes: 637109 Changes: pycaptcha (0.4-1) unstable; urgency=low . * Initial release (Closes: #637109) * Upload is sponsored by Yaroslav Halchenko Checksums

Accepted libdbix-dbstag-perl 0.12-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: libdbix-dbstag-perl - module providing relational database to hierarchical mapping Closes: 644272 Changes: libdbix-dbstag-perl (0.12-1) unstable; urgency=low . * Initial Release (Closes: #644272). Checksums-Sha1

Accepted gbrowse 2.42~dfsg-1 (source all amd64)

-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: gbrowse- GMOD Generic Genome Browser gbrowse-calign - CAlign helper gbrowse-data - Sample data to use GBrowse Changes: gbrowse (2.42~dfsg-1) unstable; urgency=low . * New upstream release

Accepted circos 0.55-2 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: circos - Package for visualizing data and information otf-symbols-circos - Fonts used by default in Circos Changes: circos (0.55-2) unstable; urgency=low . * Add pre-depends on dpkg to support xz compression

Accepted circos-tools 0.16-2 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: circos-tools - Helper tools for Circos Changes: circos-tools (0.16-2) unstable; urgency=low . * Add pre-depends on dpkg for xz compression (required for Ubuntu) Checksums-Sha1: 466b46c8e6584d5a4505bc22b8816595e8cc58b8 2000

Accepted ruby-text 0.2.0-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: ruby-text - Collection of text algorithms for Ruby Closes: 644136 Changes: ruby-text (0.2.0-1) unstable; urgency=low . * Initial release (Closes: #644136) Checksums-Sha1: a51c428d0e03f661e3d7ec916eea289bbdd74b8a

Accepted ruby-cassiopee 0.1.9-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: ruby-cassiopee - Library to index strings and to search with exact or approximate Closes: 644137 Changes: ruby-cassiopee (0.1.9-1) unstable; urgency=low . * Initial release (Closes: #644137) Checksums-Sha1

Accepted mobyle 1.0.3~dfsg-1 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: mobyle - Web portal that provides web forms for command-line software mobyle-utils - binary tools used by Mobyle Changes: mobyle (1.0.3~dfsg-1) unstable; urgency=low . * New upstream release (bug fixes

Accepted libdbix-class-tree-nestedset-perl 0.10-1 (source all)

-maintain...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: libdbix-class-tree-nestedset-perl - module to manage trees of data using the nested set model Closes: 647417 Changes: libdbix-class-tree-nestedset-perl (0.10-1) unstable; urgency=low

Accepted libbio-chado-schema-perl 0.09040-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: libbio-chado-schema-perl - DBIx::Class layer for the Chado database schema Closes: 647416 Changes: libbio-chado-schema-perl (0.09040-1) unstable; urgency=low . * Initial Release (Closes: #647416). Checksums

Accepted biomaj 1.2.0-2 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: biomaj - Biological banks updater biomaj-properties - bank properties file examples Changes: biomaj (1.2.0-2) unstable; urgency=low . * Fix Mysql dependency name. Checksums-Sha1

Accepted libbio-chado-schema-perl 0.10010-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: libbio-chado-schema-perl - DBIx::Class layer for the Chado database schema Changes: libbio-chado-schema-perl (0.10010-1) unstable; urgency=low . * New upstream release Checksums-Sha1

Accepted ncbi-blast+ 2.2.25-6 (source all amd64)

-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: ncbi-blast+ - next generation suite of BLAST sequence search tools ncbi-blast+-legacy - NCBI Blast legacy call script Closes: 642986 Changes: ncbi-blast+ (2.2.25-6) unstable; urgency=low . * debian

Accepted mobyle-programs 2.1-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: mobyle-programs - Program descriptions for the mobyle portal Changes: mobyle-programs (2.1-1) unstable; urgency=low . * Initial release. Checksums-Sha1: a5ea10c77e1fa70e7c8fa8533b5f8a6038e47970 2065 mobyle

Accepted mobyle 1.0.2~dfsg-1 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: mobyle - Web portal that provides web forms for command-line software mobyle-utils - binary tools used by Mobyle Closes: 637230 Changes: mobyle (1.0.2~dfsg-1) unstable; urgency=low . * Initial release

Accepted mobyle 1.0.2~dfsg-2 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: mobyle - Web portal that provides web forms for command-line software mobyle-utils - binary tools used by Mobyle Closes: 644277 Changes: mobyle (1.0.2~dfsg-2) unstable; urgency=low . * debian/rules

Accepted libchado-perl 1.22-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: chado-utils - tools to add/extract data from Chado libchado-perl - database schema and tools for genomic data Closes: 639868 Changes: libchado-perl (1.22-1) unstable; urgency=low . * Initial Release (Closes

Accepted biomaj 1.2.0-4 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: biomaj - biological data-bank updater biomaj-properties - biological data-bank updater - example properties files Closes: 653408 656066 656111 656254 656670 657009 657024 657341 657463 657491 657512 657548 657664

Accepted biomaj 1.2.0-5 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: biomaj - biological data-bank updater biomaj-properties - biological data-bank updater - example properties files Closes: 658833 Changes: biomaj (1.2.0-5) unstable; urgency=low . * Add missing file to package

Accepted ruby-text 1.0.2-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: ruby-text - Collection of text algorithms for Ruby Changes: ruby-text (1.0.2-1) unstable; urgency=low . * New upstream release Checksums-Sha1: 61c400dfd157144fc476bb4fd83c5153a0f621bf 2025 ruby-text_1.0.2-1.dsc

Accepted mobyle-programs 3.1-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: mobyle-programs - Program descriptions for the mobyle portal Changes: mobyle-programs (3.1-1) unstable; urgency=low . * New upstream release, fix some hard paths. Checksums-Sha1

Accepted gbrowse 2.48~dfsg-1 (source all amd64)

-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: gbrowse- GMOD Generic Genome Browser gbrowse-calign - CAlign helper gbrowse-data - Sample data to use GBrowse Changes: gbrowse (2.48~dfsg-1) unstable; urgency=low . [ Olivier Sallou

Accepted ncbi-blast+ 2.2.26-1 (source all amd64)

-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: ncbi-blast+ - next generation suite of BLAST sequence search tools ncbi-blast+-legacy - NCBI Blast legacy call script Changes: ncbi-blast+ (2.2.26-1) unstable; urgency=low . [ Olivier Sallou ] * New

Accepted ncbi-blast+ 2.2.26-2 (source all amd64)

-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: ncbi-blast+ - next generation suite of BLAST sequence search tools ncbi-blast+-legacy - NCBI Blast legacy call script Closes: 663244 Changes: ncbi-blast+ (2.2.26-2) unstable; urgency=low . * debian

Accepted libchado-perl 1.22-3 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: chado-utils - tools to add/extract data from Chado libchado-perl - database schema and tools for genomic data Changes: libchado-perl (1.22-3) unstable; urgency=low . * debian/patches/remove_pl_extension.patch

Accepted mobyle 1.0.4~dfsg-1 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: mobyle - Web portal that provides web forms for command-line software mobyle-utils - binary tools used by Mobyle Changes: mobyle (1.0.4~dfsg-1) unstable; urgency=low . * New upstream version. - Possible

Accepted mobyle-programs 3.0-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: mobyle-programs - Program descriptions for the mobyle portal Changes: mobyle-programs (3.0-1) unstable; urgency=low . * New upstream version Checksums-Sha1: 9b7f0337a78d02c7bdedf206288390e9570d8c18 2065 mobyle

Accepted mobyle 1.0.4~dfsg-2 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: mobyle - Web portal that provides web forms for command-line software mobyle-utils - binary tools used by Mobyle Changes: mobyle (1.0.4~dfsg-2) unstable; urgency=low . * Add missing dep on python-pygraphviz

Accepted biomaj 1.2.0-3 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: biomaj - Biological banks updater biomaj-properties - bank properties file examples Closes: 651680 Changes: biomaj (1.2.0-3) unstable; urgency=low . * Add Portuguese translation for debconf (Closes: #651680

Accepted clustalo 1.0.3-1 (source all amd64)

-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: clustalo - General purpose multiple sequence alignment program for proteins libclustalo-dev - library to embed Clustal Omega libclustalo-doc - API documentation Closes: 652031 Changes: clustalo

Accepted biomaj-watcher 1.2.0-3 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: biomaj-watcher - BioMAJ web interface Closes: 651682 Changes: biomaj-watcher (1.2.0-3) unstable; urgency=low . * Add debconf translation (Closes: #651682 #650871) - Portuguese, thanks to Pedro Ribeiro p.m42.ribe

Accepted gassst 1.28-1 (source amd64)

-By: Olivier Sallou olivier.sal...@irisa.fr Description: gassst - Global alignment short sequence search tool Closes: 654603 Changes: gassst (1.28-1) unstable; urgency=low . * Initial release (Closes: #654603) Checksums-Sha1: d0e6fd05aabeaa445c89e46786f92c74d4e7035d 1321 gassst_1.28-1

Accepted biomaj-watcher 1.2.0-4 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: biomaj-watcher - biological data-bank updater - web interface Closes: 653825 657478 658175 658225 658266 658412 658455 658828 659164 659171 659911 659945 659997 Changes: biomaj-watcher (1.2.0-4) unstable; urgency=low

Accepted bioperl 1.6.901-3 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: bioperl- Perl tools for computational molecular biology libbio-perl-perl - BioPerl core perl modules Closes: 661793 Changes: bioperl (1.6.901-3) unstable; urgency=low . * Team upload. [ Olivier Sallou

Accepted mobyle 1.0.4~dfsg-3 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: mobyle - Web portal that provides web forms for command-line software mobyle-utils - binary tools used by Mobyle Closes: 656078 Changes: mobyle (1.0.4~dfsg-3) unstable; urgency=low . * Use invoke-rc.d

Accepted ruby-text 1.0.3-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: ruby-text - Collection of text algorithms for Ruby Changes: ruby-text (1.0.3-1) unstable; urgency=low . * New upstream release Checksums-Sha1: d283135de5b49a2922099ed2f35a29c65c8706f8 2025 ruby-text_1.0.3-1.dsc

Accepted libchado-perl 1.22-2 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou olivier.sal...@irisa.fr Description: chado-utils - tools to add/extract data from Chado libchado-perl - database schema and tools for genomic data Closes: 659295 Changes: libchado-perl (1.22-2) unstable; urgency=low . [Olivier Sallou] * Fix

Accepted mobyle 1.0.5~dfsg-1 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: mobyle - Web portal that provides web forms for command-line software mobyle-utils - binary tools used by Mobyle Changes: mobyle (1.0.5~dfsg-1) unstable; urgency=low . * New upstream release * debian

Accepted f2j 0.8.1-1 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: f2j- Fortran to Java compiler libf2j-java - Java library port of Fortran numerical libraries Closes: 657184 Changes: f2j (0.8.1-1) unstable; urgency=low . [ Olivier Sallou ] * Initial release (Closes: #657184

Accepted f2j 0.8.1-2 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: f2j- Fortran to Java compiler libf2j-java - Java library port of Fortran numerical libraries Changes: f2j (0.8.1-2) unstable; urgency=low . * debian/copyright: Add missing statement on non commercial usage Checksums

Accepted jlapack 0.8~dfsg-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: libjlapack-java - LAPACK numerical subroutines translated from their Fortran 77 sou Closes: 665341 Changes: jlapack (0.8~dfsg-1) unstable; urgency=low . * Initial release (Closes: #665341) Checksums-Sha1

Accepted biomaj-watcher 1.2.0-8 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: biomaj-watcher - biological data-bank updater - web interface Closes: 673887 Changes: biomaj-watcher (1.2.0-8) unstable; urgency=low . [Martin Bagge brot...@bsnet.se, debian-l10n-swedish] * po/sv.po: Update swedish

Accepted mobyle 1.0.6~dfsg-1 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: mobyle - Web portal that provides web forms for command-line software mobyle-utils - binary tools used by Mobyle Changes: mobyle (1.0.6~dfsg-1) unstable; urgency=low . * New upstream release Checksums-Sha1

Accepted mobyle-programs 4.0-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: mobyle-programs - Program descriptions for the mobyle portal Changes: mobyle-programs (4.0-1) unstable; urgency=low . * New upstream release Checksums-Sha1: fefd8e1098f4b16c0f29eb9bec3bb8bb3b32ce2c 2065 mobyle-programs_4.0

Accepted logol 1.5.0-1 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: logol - Pattern maching tool using Logol language logol-bin - Pattern maching tool using Logol language Closes: 678373 Changes: logol (1.5.0-1) unstable; urgency=low . * Initial release (Closes: #678373). Checksums-Sha1

Accepted clustalo 1.0.4-1 (source all amd64)

-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: clustalo - General purpose multiple sequence alignment program for proteins libclustalo-dev - library to embed Clustal Omega libclustalo-doc - API documentation Changes: clustalo (1.0.4-1) unstable

Accepted biomaj 1.2.0-6 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: biomaj - biological data-bank updater biomaj-properties - biological data-bank updater - example properties files Closes: 678490 Changes: biomaj (1.2.0-6) unstable; urgency=low . [ Olivier Sallou ] * Clean files

Accepted biomaj-watcher 1.2.0-5 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: biomaj-watcher - biological data-bank updater - web interface Closes: 661351 670391 Changes: biomaj-watcher (1.2.0-5) unstable; urgency=low . * Remove remaining files after purge (Closes: #670391). [Martin Bagge brot

Accepted mapsembler2 2.0.31-1 (source amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: mapsembler2 - bioinformatics targeted assembly software Changes: mapsembler2 (2.0.31-1) unstable; urgency=low . * New upstream release Checksums-Sha1: 9dc57f797f90bab9c563d4fcdaf8aeb5e68ca34e 2013 mapsembler2_2.0.31-1.dsc

Accepted minia 1.6088-1 (source amd64)

Changed-By: Olivier Sallou osal...@debian.org Description: minia - short-read biological sequence assembler Changes: minia (1.6088-1) unstable; urgency=low . * New upstream release Upstream doc added to source package Checksums-Sha1: 360d633097e64813c5e67fd6c71423ef71165733 1928

Accepted squizz 0.99b+dfsg-3 (source amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: libsquizz - Conversion libs used by squizz genetic sequence converter libsquizz-dev - development tools for squizz genetic sequence converter squizz - Converter for genetic sequences and alignments Closes

Accepted minia 1.6067+dfsg-1 (source amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: minia - short-read assembler Closes: 735158 Changes: minia (1.6067+dfsg-1) unstable; urgency=medium . * First debian package (Closes: #735158). Checksums-Sha1: d673221b941279665929ae970423c21f394fd85a 1961 minia_1.6067+dfsg

Accepted minia 1.6067+dfsg-2 (source amd64)

Changed-By: Olivier Sallou osal...@debian.org Description: minia - short-read biological sequence assembler Closes: 735158 735331 Changes: minia (1.6067+dfsg-2) unstable; urgency=low . [ Olivier Sallou ] * d/control: Add info on assembler term (Closes: #735158). Add

Accepted logol 1.6.9-3 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: logol - Pattern matching tool using Logol language logol-bin - Pattern matching tool using Logol language Closes: 735579 Changes: logol (1.6.9-3) unstable; urgency=low . * d/control,d/patches: Remove rubygems dependency

Accepted biojava-live 1:1.7.1-4 (source all)

: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: libbiojava-java - Java API to biological data and applications (default version) libbiojava-java-demos - Example programs for BioJava libbiojava-java-doc - [Biology

Accepted biojava3-live 3.0.7+dfsg-1 (source all)

Packaging Team debian-med-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: libbiojava3-java - Java API to biological data and applications (default version) libbiojava3-java-doc - [Biology] Documentation for BioJava libbiojava3.0-java - Java API

Accepted discosnp 1.0.1-1 (source amd64)

Changed-By: Olivier Sallou osal...@debian.org Description: discosnp - discovering Single Nucleotide Polymorphism from raw set(s) of rea Closes: 737098 Changes: discosnp (1.0.1-1) unstable; urgency=low . * First debian package (Closes: #737098). Checksums-Sha1

Accepted mapsembler2 2.0.5+dfsg-1 (source amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: mapsembler2 - bioinformatics targeted assembly software Closes: 737099 Changes: mapsembler2 (2.0.5+dfsg-1) unstable; urgency=medium . * First debian package (Closes: #737099). Checksums-Sha1

Accepted discosnp 1.0.1-2 (source amd64)

Changed-By: Olivier Sallou osal...@debian.org Description: discosnp - discovering Single Nucleotide Polymorphism from raw set(s) of rea Changes: discosnp (1.0.1-2) unstable; urgency=low . * d/control: FTBS due to missing deps Checksums-Sha1: 8b6fb0acf5212c6a69b4eff73321b0ee3d2bc8d3 1970

Accepted mapsembler2 2.0.5+dfsg-2 (source amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: mapsembler2 - bioinformatics targeted assembly software Changes: mapsembler2 (2.0.5+dfsg-2) unstable; urgency=low . * d/control: Add missing build dep Checksums-Sha1: b8f517fdf969dc6f8809fd51a8a3a7e0348fbaa9 2041

Accepted discosnp 1.0.1-3 (source amd64)

Changed-By: Olivier Sallou osal...@debian.org Description: discosnp - discovering Single Nucleotide Polymorphism from raw set(s) of rea Changes: discosnp (1.0.1-3) unstable; urgency=low . * d/rules: FTBS fix help2man command Checksums-Sha1: 450c0d2e64c2d3612b176930473396a49c30692b 1970

Accepted logol 1.6.10-1 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: logol - Pattern matching tool using Logol language logol-bin - Pattern matching tool using Logol language Changes: logol (1.6.10-1) unstable; urgency=low . * New upstream release, fix bug on Hamming error search

Accepted logol 1.6.9-1 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: logol - Pattern matching tool using Logol language logol-bin - Pattern matching tool using Logol language Changes: logol (1.6.9-1) unstable; urgency=low . * New upstream release (bug fixes, add Windows support

Accepted biomaj 1.2.3-3 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: biomaj - biological data-bank updater biomaj-properties - biological data-bank updater - example properties files Changes: biomaj (1.2.3-3) unstable; urgency=low . * d/control: remove dependency on mysql-server

Accepted logol 1.6.9-2 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: logol - Pattern matching tool using Logol language logol-bin - Pattern matching tool using Logol language Closes: 730916 Changes: logol (1.6.9-2) unstable; urgency=low . * Fix prolog doc generation (Closes: #730916

Accepted biomaj-watcher 1.2.0-6 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: biomaj-watcher - biological data-bank updater - web interface Closes: 670495 Changes: biomaj-watcher (1.2.0-6) unstable; urgency=low . * Fix upgrade issue (Closes: #670495) Checksums-Sha1

Accepted clustalo 1.1.0-1 (source all amd64)

-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: clustalo - General purpose multiple sequence alignment program for proteins libclustalo-dev - library to embed Clustal Omega libclustalo-doc - API documentation Changes: clustalo (1.1.0-1) unstable

Accepted picard-tools 1.82-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: libsam-java - Java library to manipulate SAM and BAM files picard-tools - Command line tools to manipulate SAM and BAM files Changes: picard-tools (1.82-1) unstable; urgency=low . * New upstream release Checksums

Accepted biojava3-live 3.0.5-2 (source all)

Team debian-med-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: libbiojava3-java - Java API to biological data and applications (default version) libbiojava3-java-doc - [Biology] Documentation for BioJava libbiojava3.0-java - Java API to biological

Accepted libchado-perl 1.23-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: chado-utils - tools to add/extract data from Chado libchado-perl - database schema and tools for genomic data Changes: libchado-perl (1.23-1) unstable; urgency=low . * New upstream release Checksums-Sha1

Accepted biomaj-watcher 1.2.0-7 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: biomaj-watcher - biological data-bank updater - web interface Closes: 670495 Changes: biomaj-watcher (1.2.0-7) unstable; urgency=low . * Fix upgrade issue, deleted wrong file (Closes: #670495) Checksums-Sha1

Accepted mobyle-programs 4.0-2 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: mobyle-programs - Program descriptions for the mobyle portal Closes: 668753 Changes: mobyle-programs (4.0-2) unstable; urgency=low . * Remove deploy at install (Closes: #668753). Checksums-Sha1

Accepted logol 1.6.0-1 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: logol - Pattern matching tool using Logol language logol-bin - Pattern matching tool using Logol language Changes: logol (1.6.0-1) unstable; urgency=low . * New upstream release with bug fixes Checksums-Sha1

Accepted squizz 0.99b+dfsg-1 (source amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: libsquizz - Conversion libs used by squizz genetic sequence converter libsquizz-dev - development tools for squizz genetic sequence converter squizz - Converter for genetic sequences and alignments Changes

Accepted mobyle-programs 5.1-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: mobyle-programs - Program descriptions for the mobyle portal Changes: mobyle-programs (5.1-1) unstable; urgency=low . * New upstream release Checksums-Sha1: baf2355252c0e74cde382b8eaf8a994ad6f0ac25 2060 mobyle-programs_5.1

Accepted mobyle 1.5.0+dfsg-1 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: mobyle - Web portal that provides web forms for command-line software mobyle-utils - binary tools used by Mobyle Changes: mobyle (1.5.0+dfsg-1) unstable; urgency=low . * New upstream release Checksums-Sha1

Accepted logol 1.5.0-2 (source all amd64)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: logol - Pattern maching tool using Logol language logol-bin - Pattern maching tool using Logol language Changes: logol (1.5.0-2) unstable; urgency=low . * Support Arch dependent and arch independent separate builds

Accepted libjbzip2-java 0.9.1-3 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: libjbzip2-java - bzip2 compression/decompression library Closes: 678314 Changes: libjbzip2-java (0.9.1-3) unstable; urgency=low . * Fix Vcs-Svn package name to match source name (Closes: #678314). Checksums-Sha1

Accepted biojava3-live 3.0.5-1 (source all)

Team debian-med-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: libbiojava3-java - Java API to biological data and applications (default version) libbiojava3-java-doc - [Biology] Documentation for BioJava libbiojava3.0-java - Java API to biological

Accepted libvm-ec2-perl 1.20-1 (source all)

Changed-By: Olivier Sallou osal...@debian.org Description: libvm-ec2-perl - module providing controls on Amazon EC2 and Eucalyptus Changes: libvm-ec2-perl (1.20-1) unstable; urgency=low . * New upstream release * debian/control: add new dependencies, remove perl depencency (implicit

Accepted libbio-graphics-perl 2.31-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: libbio-graphics-perl - Generate GD images of Bio::Seq objects Changes: libbio-graphics-perl (2.31-1) unstable; urgency=low . * e5dd93 New upstream release 2.31 Checksums-Sha1

Accepted libbio-graphics-perl 2.32-1 (source all)

...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: libbio-graphics-perl - Generate GD images of Bio::Seq objects Changes: libbio-graphics-perl (2.32-1) unstable; urgency=low . * 63f795 New upstream release 2.32 Checksums-Sha1: 5ffe09e6c3fa80d9fee88373d9f053ae69594e91

Accepted gbrowse 2.54+dfsg-1 (source all amd64)

-packag...@lists.alioth.debian.org Changed-By: Olivier Sallou osal...@debian.org Description: gbrowse- GMOD Generic Genome Browser gbrowse-calign - CAlign helper gbrowse-data - Sample data to use GBrowse Changes: gbrowse (2.54+dfsg-1) unstable; urgency=low . * New upstream release

  1   2   3   4   >