Re: beast-mcmc2: Cannot find symbol CharStreams.fromString(newick)

2018-08-04 Thread Emmanuel Bourg
Le 04/08/2018 à 11:23, Andreas Tille a écrit : > Upstream confirmed this[2] - and suggests to use antlr 4.7. > So my question is: Can we expect this version of antlr in Debian > in the foreseeable future? I tried after you email but failed. The best I could do for now was upgrading to 4.6.

Help needed for Artemis

2018-08-04 Thread Andreas Tille
Hi, I try to build the latest version of Artemis[1] but when I try to build the current state in Git I get: ...

Re: Help needed for Artemis

2018-08-04 Thread Andreas Tille
Hi Markus, after fixing the patch I've build all class files successfully but when it comes to generating the JAR it switches to a subdirectory which leads to ... cd jar_build/build; \ rm -rf META-INF/MANIFEST.MF; \ echo "Main-Class: uk.ac.sanger.artemis.components.ArtemisMain\nPermissions:

Re: beast-mcmc2: Cannot find symbol CharStreams.fromString(newick)

2018-08-04 Thread Andreas Tille
On Thu, Jul 19, 2018 at 09:44:30AM +0200, Emmanuel Bourg wrote: > Hi Andreas, > > Le 19/07/2018 à 08:56, Andreas Tille a écrit : > > > [javac] > > /build/beast2-mcmc-2.5.0+dfsg/src/beast/util/TreeParser.java:353: error: > > cannot find symbol > > [javac] CharStream charStream =