BioMAJ and getData

2011-08-22 Thread Steffen Möller
Dear all, with BioMAJ [1] and getData [2], our distro has now two tools in the distribution that address the retrieval and post-processing of public (or not so public) databases. Hilmar from the OBF has just pointed me to an again very different approach towards the same by the Open Knowledge

Re: BioMAJ and getData

2011-08-22 Thread Olivier Sallou
- Mail original - De: Steffen Möller steffen_moel...@gmx.de À: Debian Med Project List debian-med@lists.debian.org Envoyé: Lundi 22 Août 2011 09:10:47 Objet: BioMAJ and getData Dear all, with BioMAJ [1] and getData [2], our distro has now two tools in the distribution that

Re: RFS: Sitplus -- Free software framework for ludic-therapeutic activities

2011-08-22 Thread Luis Rivas
2011/8/17 Andreas Tille andr...@an3as.eu: [Luis, I'll drop the CC in case you confirm that you are reading this list] Hi Luis, thanks for your work on sitplus. Hi, Andreas. Thanks for reviewing my package. I've uploaded a new version, 1.0.1-2, to [1]. Here are my comments. 1. At first I

Re: RFS: Sitplus -- Free software framework for ludic-therapeutic activities

2011-08-22 Thread Andreas Tille
On Mon, Aug 22, 2011 at 02:53:37PM +0200, Luis Rivas wrote: 1. At first I would recommend to reflect group maintenance via Done! Fine. I've uploaded my code to git.debian.org/git/debian-med/sitplus.git and updated the Vcs field as you told me. I've followed [2], I hope I didn't made any

Latest blog post

2011-08-22 Thread Michael Banck
Hi, the latest debian-med blog post (syndicated on Planet Debian, CC'd) http://debianmed.blogspot.com/2011/08/experimenting-with-amazon-cloud-and.html has raised some eyebrows. First off, it should be somehow stated which person wrote/posted the particular post for team-based blogs. This blog

Re: Latest blog post

2011-08-22 Thread Steffen Möller
Hello, On 08/22/2011 05:15 PM, Michael Banck wrote: the latest debian-med blog post (syndicated on Planet Debian, CC'd) http://debianmed.blogspot.com/2011/08/experimenting-with-amazon-cloud-and.html has raised some eyebrows. First off, it should be somehow stated which person wrote/posted

Re: Latest blog post

2011-08-22 Thread Nelson A. de Oliveira
Hi! On Mon, Aug 22, 2011 at 12:34 PM, Steffen Möller steffen_moel...@gmx.de wrote: For the future, is there a way to have some bits not forwarded? Or to have them only selectively forwarded? Well, the mailing list, probably. You can tag the posts and have a RSS (for that specific tag) that

Re: Latest blog post

2011-08-22 Thread Michael Banck
Hi, On Mon, Aug 22, 2011 at 05:34:28PM +0200, Steffen Möller wrote: On 08/22/2011 05:15 PM, Michael Banck wrote: the latest debian-med blog post (syndicated on Planet Debian, CC'd) http://debianmed.blogspot.com/2011/08/experimenting-with-amazon-cloud-and.html has raised some eyebrows.

Re: Workaround for the *LibraryDepends.cmake issue

2011-08-22 Thread Michael Schutte
On Sun, Aug 21, 2011 at 08:51:04PM +0200, Michael Schutte wrote: I’ll take care of this tomorrow. ITK is a team effort anyway. VTK maintainers: now it’s time to complain (or upload yourself) :-) Done! Cheers, -- Michael Schutte | michi@{uiae.at,debian.org} Innsbruck,

Re: Bug#506992: vtk: diff for NMU version 5.6.1-6.1

2011-08-22 Thread Michael Schutte
On Mon, Aug 22, 2011 at 06:16:59PM +0200, Michael Schutte wrote: I just uploaded vtk to DELAYED/0. For the record, the updated package was rejected due to #638883. All the best, -- Michael Schutte | michi@{uiae.at,debian.org} Innsbruck, Austria| happily

Re: Workaround for the *LibraryDepends.cmake issue

2011-08-22 Thread Andreas Tille
On Mon, Aug 22, 2011 at 06:32:05PM +0200, Michael Schutte wrote: I’ll take care of this tomorrow. ITK is a team effort anyway. VTK maintainers: now it’s time to complain (or upload yourself) :-) Done! Cool! Thanks, Andreas. -- http://fam-tille.de -- To UNSUBSCRIBE, email to

Re: Bug#506992: vtk: diff for NMU version 5.6.1-6.1

2011-08-22 Thread Andreas Tille
On Mon, Aug 22, 2011 at 07:22:54PM +0200, Michael Schutte wrote: On Mon, Aug 22, 2011 at 06:16:59PM +0200, Michael Schutte wrote: I just uploaded vtk to DELAYED/0. For the record, the updated package was rejected due to #638883. Uhmmm. :-( IMHO it is quite straightforeward to verify sqlite

Re: Bug#506992: vtk: diff for NMU version 5.6.1-6.1

2011-08-22 Thread Mathieu Malaterre
On Mon, Aug 22, 2011 at 8:46 PM, Andreas Tille andr...@an3as.eu wrote: On Mon, Aug 22, 2011 at 07:22:54PM +0200, Michael Schutte wrote: On Mon, Aug 22, 2011 at 06:16:59PM +0200, Michael Schutte wrote: I just uploaded vtk to DELAYED/0. For the record, the updated package was rejected due to

Re: Bug#506992: vtk: diff for NMU version 5.6.1-6.1

2011-08-22 Thread Michael Schutte
Hi, On Mon, Aug 22, 2011 at 08:46:00PM +0200, Andreas Tille wrote: IMHO it is quite straightforeward to verify sqlite whether there are some changes. I would think handling this apropriately and overriding the ftgl library with the (not so good) reason to push foreward this package to be

Re: RFS: Sitplus -- Free software framework for ludic-therapeutic activities

2011-08-22 Thread Luis Rivas
2011/8/22 Andreas Tille andr...@an3as.eu: Do the git-buildpackage users have any idea what to do? dh_clean removes src/mod_camera/a la espera/mod_camera.pjd.bak file at the beginning of the build process, so git thinks it is an uncommited change. The error comes from an unclean orig.tar.gz from

Re: Latest blog post

2011-08-22 Thread Joerg Jaspert
On 12580 March 1977, Michael Banck wrote: On 08/22/2011 05:15 PM, Michael Banck wrote: the latest debian-med blog post (syndicated on Planet Debian, CC'd) http://debianmed.blogspot.com/2011/08/experimenting-with-amazon-cloud-and.html has raised some eyebrows. First off, it should be

Re: Bug#506992: vtk: diff for NMU version 5.6.1-6.1

2011-08-22 Thread Mathieu Malaterre
On Mon, Aug 22, 2011 at 9:19 PM, Michael Schutte mi...@debian.org wrote: Hi, On Mon, Aug 22, 2011 at 08:46:00PM +0200, Andreas Tille wrote: IMHO it is quite straightforeward to verify sqlite whether there are some changes.  I would think handling this apropriately and overriding the ftgl

Re: Bug#506992: vtk: diff for NMU version 5.6.1-6.1

2011-08-22 Thread Steve M. Robbins
On Mon, Aug 22, 2011 at 10:37:05PM +0200, Mathieu Malaterre wrote: I am fairly confident with the sqlite patch. I am a lot less confident with the ftgl patch. For some reason FTLibrary.h is not installed in ftgl installation but seems to be used by VTK internals. What are the differences

Re: Licsensing scientific data

2011-08-22 Thread Peter Cock
On Mon, Aug 15, 2011 at 2:16 PM, Peter Cock p.j.a.c...@googlemail.com wrote: Dear all, I have now emailed UniProt regarding the recent discussion on the Debian-Med list about the UniProt CC BY-ND 3.0 licence stemming from the inclusion of example data from UniProt in EMBOSS (and potentially