Packaging SMALT for Debian

2014-04-08 Thread Andreas Tille
Hi Hannes, I'm writing you on behalf of the Debian Med team which tries to package software which is relevant in medicine and biology for official Debian. If you want to get an overview about the biological software we have included into Debian you can get an overview here:

HTSeq released incomplete tarball.

2014-04-08 Thread Diane Trout
Hello, I was wondering what one should do when upstream's source release tarball is missing important components. HTSeq's release tarballs after my initial release stopped including the .pyx and .i source files and only included the C/CXX code generated by SWIG and Cython. I also discovered

Re: HTSeq released incomplete tarball.

2014-04-08 Thread Diane Trout
Without beeing able to evaluate your chances to convince upstream (which would my *personal* prefered choice) I think you shoudl decide what from your point of view is the solution that might create the least trouble with an acceptable result for the user. We have some

Re: [MoM] incorporating phyutility into the packages

2014-04-08 Thread Stephen Smith
Hi Thorsten No, libmatrixExp.so isn't used for anything here. Is there a way to remove that in the debian package or do I need to do it in the original phyutilty and push a new version? Take care, Stephen On Tue, Apr 01, 2014 at 02:55:44PM +0200, Thorsten Alteholz wrote: Hi Stephen, lintian