Re: [Help] Failed to upgrade bcftools to version 1.5

2017-07-23 Thread Afif Elghraoui
I was under the impression that htslib 1.5, required for bcftools 1.5, has a soname bump. There is no pysam release yet to wrap htslib 1.5, so I think upgrading bcftools/samtools/htslib right now to 1.5 will just make it impossible to use pysam until a new release comes out, right? I did not get

Re: Getting user-space containers with Singularity - works

2017-07-23 Thread Afif Elghraoui
Hi, Thanks for bringing this up, Steffen. على الأحد 23 تـمـوز 2017 ‫11:30، كتب Steffen Möller: [...] > > Our pals from neuro.debian.net are already actively using this > technology and kindly nurture backports.d.o with it. I think the Neurodebian group only maintains backports in their own

Getting user-space containers with Singularity - works

2017-07-23 Thread Steffen Möller
Hello, Many (most) HPC administrators very much detest the idea to grant any sort of root privileges to their users. This consequently rules out the installation of our Debian packages and also the employment of Docker images for the execution of binaries. Ouch! After all, with this perpetual