I didn't mean that these other non-packaged options were direct
alternatives to drmaa, only that snakemake already doesn't have all its
features available in Debian without installing external packages, and
that I don't consider losing one more to be a serious bug.
If anyone _wants_ to work
Am Sat, Feb 19, 2022 at 09:23:16PM + schrieb Rebecca N. Palmer:
> The documentation says:
> https://github.com/snakemake/snakemake/blob/main/docs/tutorial/additional_features.rst#cluster-execution
> https://github.com/snakemake/snakemake/blob/main/docs/executing/cluster.rst
> I don't know how
The documentation says:
https://github.com/snakemake/snakemake/blob/main/docs/tutorial/additional_features.rst#cluster-execution
https://github.com/snakemake/snakemake/blob/main/docs/executing/cluster.rst
I don't know how up to date this is, but the code to use drmaa is still
there.
snakemake
Hi Rebecca,
I've checked the situation of python3-drmaa:
Autopkgtest of python3-drmaa fails with:
OSError: /usr/lib/x86_64-linux-gnu/libjemalloc.so.2: cannot allocate memory
in static TLS block
which is caused by bug #951704 (tagged wontfix).
Drmaa does not seem to be maintained upstream
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