Re: Should we package BioConductor TFBSTools? [Was [libtfbs-perl] 04/08: Add upstream's notice of deprecation to the package's description.]

2018-05-15 Thread Andreas Tille
Hi Steffen, I stumbled upon this old mail. While nobody has answered so far I'd like to give some update. On Sun, Oct 22, 2017 at 02:27:51PM +0200, Steffen Möller wrote: > Hello, > > On 21.10.17 10:11, Charles Plessy wrote: > > Le Sat, Oct 21, 2017 at 08:08:49AM +0200, Andreas Tille a écrit : >

Re: Should we package BioConductor TFBSTools? [Was [libtfbs-perl] 04/08: Add upstream's notice of deprecation to the package's description.]

2017-10-22 Thread Steffen Möller
Hello, On 21.10.17 10:11, Charles Plessy wrote: > Le Sat, Oct 21, 2017 at 08:08:49AM +0200, Andreas Tille a écrit : >> when reading this commit log: Should we package Bioconductor TFBSTools? >> >> This would need at least a hand full of Bioconductor depencencies but >> usually it is quite straigh

Re: Should we package BioConductor TFBSTools? [Was [libtfbs-perl] 04/08: Add upstream's notice of deprecation to the package's description.]

2017-10-21 Thread Andreas Tille
On Sat, Oct 21, 2017 at 05:11:19PM +0900, Charles Plessy wrote: > my gut feeling is that we should better concentrate on packages more at > the core of Bioconductor, or gaining tration to move towards the core, > for example MultiAssayExperiment, unless we get a specific request. Fine for me. I j

Re: Should we package BioConductor TFBSTools? [Was [libtfbs-perl] 04/08: Add upstream's notice of deprecation to the package's description.]

2017-10-21 Thread Charles Plessy
Le Sat, Oct 21, 2017 at 08:08:49AM +0200, Andreas Tille a écrit : > > when reading this commit log: Should we package Bioconductor TFBSTools? > > This would need at least a hand full of Bioconductor depencencies but > usually it is quite straightforward and can be easily done via > > dh-ma

Should we package BioConductor TFBSTools? [Was [libtfbs-perl] 04/08: Add upstream's notice of deprecation to the package's description.]

2017-10-20 Thread Andreas Tille
Hi, when reading this commit log: Should we package Bioconductor TFBSTools? This would need at least a hand full of Bioconductor depencencies but usually it is quite straightforward and can be easily done via dh-make-R --team med --test run-unit-test plus editing d/copyright a bit. If my